Literature DB >> 21588171

Bromido{N-methyl-N'-[1-(2-pyrid-yl)ethyl-idene]ethane-1,2-diamine-κN,N',N''}-(thio-cyanato-κN)-copper(II).

Li-Jun Liu1.   

Abstract

In the title mononuclear copper(II) compound, [CuBr(NCS)(C(10)H(15)N(3))], the Cu(II) atom is five-coordinated by three N atoms of the Schiff base ligand, the N atom of a thio-cyanate ligand and by one bromide ion forming a distorted square-pyramidal geometry. In the crystal structure, mol-ecules are linked through inter-molecular N-H⋯Br hydrogen bonds into chains propagating along [101].

Entities:  

Year:  2010        PMID: 21588171      PMCID: PMC3007341          DOI: 10.1107/S1600536810027534

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to Schiff basecopper(II) complexes, see: Adhikary et al. (2009 ▶); Al-Karawi (2009 ▶); Xiao & Zhang (2009 ▶); Rajasekar et al. (2010 ▶); Sang & Lin (2010 ▶); Qin et al. (2010 ▶). For related copper complexes with square-pyramidal coordination, see: Wang et al. (2010 ▶); Zhang et al. (2009 ▶); Wei et al. (2007 ▶).

Experimental

Crystal data

[CuBr(NCS)(C10H15N3)] M = 378.78 Monoclinic, a = 10.979 (2) Å b = 11.407 (2) Å c = 12.001 (3) Å β = 109.033 (2)° V = 1420.8 (5) Å3 Z = 4 Mo Kα radiation μ = 4.48 mm−1 T = 298 K 0.30 × 0.27 × 0.27 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.347, T max = 0.377 8078 measured reflections 3022 independent reflections 1892 reflections with I > 2σ(I) R int = 0.070

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.137 S = 0.97 3022 reflections 168 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.86 e Å−3 Δρmin = −1.01 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810027534/ci5132sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810027534/ci5132Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CuBr(NCS)(C10H15N3)]F(000) = 756
Mr = 378.78Dx = 1.771 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2570 reflections
a = 10.979 (2) Åθ = 2.5–26.5°
b = 11.407 (2) ŵ = 4.48 mm1
c = 12.001 (3) ÅT = 298 K
β = 109.033 (2)°Block, blue
V = 1420.8 (5) Å30.30 × 0.27 × 0.27 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer3022 independent reflections
Radiation source: fine-focus sealed tube1892 reflections with I > 2σ(I)
graphiteRint = 0.070
ω scansθmax = 27.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −13→14
Tmin = 0.347, Tmax = 0.377k = −14→12
8078 measured reflectionsl = −15→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.137H atoms treated by a mixture of independent and constrained refinement
S = 0.97w = 1/[σ2(Fo2) + (0.068P)2] where P = (Fo2 + 2Fc2)/3
3022 reflections(Δ/σ)max = 0.001
168 parametersΔρmax = 0.86 e Å3
1 restraintΔρmin = −1.01 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.18062 (6)0.60367 (6)0.05737 (6)0.0319 (2)
Br10.38736 (6)0.64845 (6)0.25208 (5)0.0412 (2)
N10.2487 (4)0.4486 (4)0.0218 (4)0.0292 (11)
N20.2631 (5)0.6533 (5)−0.0577 (4)0.0356 (12)
N30.1033 (5)0.7682 (4)0.0253 (4)0.0405 (13)
N40.0715 (5)0.5412 (5)0.1429 (5)0.0451 (14)
S1−0.03147 (18)0.50606 (17)0.32203 (16)0.0522 (5)
C10.2396 (6)0.3440 (5)0.0690 (5)0.0390 (15)
H10.19170.33820.12000.047*
C20.2974 (7)0.2460 (6)0.0456 (7)0.0527 (19)
H20.28930.17480.08030.063*
C30.3683 (7)0.2534 (6)−0.0307 (6)0.0528 (19)
H30.40900.1874−0.04740.063*
C40.3778 (6)0.3601 (6)−0.0815 (6)0.0454 (17)
H40.42490.3672−0.13300.054*
C50.3152 (5)0.4572 (5)−0.0541 (5)0.0314 (13)
C60.3174 (5)0.5760 (5)−0.1021 (5)0.0331 (14)
C70.3743 (7)0.5979 (6)−0.1975 (6)0.0519 (18)
H7A0.31790.5672−0.27060.078*
H7B0.45660.5597−0.17800.078*
H7C0.38510.6806−0.20520.078*
C80.2442 (7)0.7750 (6)−0.0943 (6)0.0518 (18)
H8A0.17870.7814−0.17120.062*
H8B0.32380.8082−0.09870.062*
C90.2019 (7)0.8386 (6)−0.0024 (6)0.0535 (19)
H9A0.27520.85040.06830.064*
H9B0.16690.9148−0.03220.064*
C100.0578 (8)0.8231 (6)0.1167 (6)0.064 (2)
H10A0.13060.84250.18420.096*
H10B0.00300.76920.13950.096*
H10C0.01040.89310.08550.096*
C110.0286 (5)0.5262 (5)0.2159 (5)0.0312 (14)
H3A0.038 (5)0.760 (6)−0.043 (3)0.080*
U11U22U33U12U13U23
Cu10.0334 (4)0.0328 (4)0.0350 (4)0.0035 (3)0.0184 (3)0.0024 (3)
Br10.0369 (4)0.0467 (4)0.0389 (4)0.0031 (3)0.0108 (3)−0.0090 (3)
N10.028 (3)0.034 (3)0.029 (3)−0.001 (2)0.014 (2)0.000 (2)
N20.030 (3)0.042 (3)0.036 (3)0.004 (2)0.013 (2)0.011 (2)
N30.049 (3)0.030 (3)0.043 (3)0.007 (2)0.014 (3)−0.003 (2)
N40.039 (3)0.056 (4)0.050 (3)0.000 (3)0.028 (3)0.000 (3)
S10.0599 (12)0.0548 (11)0.0570 (11)−0.0083 (9)0.0397 (10)−0.0003 (9)
C10.041 (4)0.036 (4)0.040 (4)−0.001 (3)0.015 (3)0.003 (3)
C20.052 (5)0.029 (4)0.071 (5)0.001 (3)0.012 (4)−0.003 (3)
C30.055 (5)0.040 (5)0.057 (5)0.006 (3)0.009 (4)−0.016 (4)
C40.039 (4)0.058 (5)0.042 (4)0.006 (3)0.017 (3)−0.016 (3)
C50.026 (3)0.039 (4)0.028 (3)0.001 (3)0.008 (3)−0.002 (3)
C60.023 (3)0.050 (4)0.029 (3)0.002 (3)0.013 (2)0.007 (3)
C70.046 (4)0.077 (5)0.041 (4)0.002 (4)0.026 (3)0.013 (4)
C80.056 (5)0.046 (5)0.066 (5)0.006 (3)0.036 (4)0.020 (4)
C90.055 (5)0.033 (4)0.065 (5)0.002 (3)0.008 (4)0.008 (3)
C100.079 (6)0.060 (5)0.054 (5)0.026 (4)0.022 (4)−0.008 (4)
C110.022 (3)0.029 (3)0.044 (4)0.000 (2)0.012 (3)−0.006 (3)
Cu1—N41.949 (5)C3—C41.380 (9)
Cu1—N21.965 (5)C3—H30.93
Cu1—N12.019 (5)C4—C51.398 (8)
Cu1—N32.044 (5)C4—H40.93
Cu1—Br12.7228 (10)C5—C61.476 (8)
N1—C11.338 (7)C6—C71.494 (8)
N1—C51.343 (7)C7—H7A0.96
N2—C61.274 (7)C7—H7B0.96
N2—C81.451 (8)C7—H7C0.96
N3—C91.470 (9)C8—C91.514 (9)
N3—C101.484 (8)C8—H8A0.97
N3—H3A0.899 (10)C8—H8B0.97
N4—C111.135 (7)C9—H9A0.97
S1—C111.630 (7)C9—H9B0.97
C1—C21.359 (9)C10—H10A0.96
C1—H10.93C10—H10B0.96
C2—C31.384 (10)C10—H10C0.96
C2—H20.93
N4—Cu1—N2168.1 (2)C3—C4—H4120.6
N4—Cu1—N197.2 (2)C5—C4—H4120.6
N2—Cu1—N179.4 (2)N1—C5—C4121.3 (6)
N4—Cu1—N398.4 (2)N1—C5—C6114.4 (5)
N2—Cu1—N382.0 (2)C4—C5—C6124.3 (6)
N1—Cu1—N3157.5 (2)N2—C6—C5113.7 (5)
N4—Cu1—Br195.75 (16)N2—C6—C7125.1 (6)
N2—Cu1—Br195.90 (14)C5—C6—C7121.1 (6)
N1—Cu1—Br194.79 (12)C6—C7—H7A109.5
N3—Cu1—Br199.67 (15)C6—C7—H7B109.5
C1—N1—C5118.9 (5)H7A—C7—H7B109.5
C1—N1—Cu1127.4 (4)C6—C7—H7C109.5
C5—N1—Cu1113.6 (4)H7A—C7—H7C109.5
C6—N2—C8125.1 (5)H7B—C7—H7C109.5
C6—N2—Cu1118.7 (4)N2—C8—C9106.6 (5)
C8—N2—Cu1115.8 (4)N2—C8—H8A110.4
C9—N3—C10112.8 (5)C9—C8—H8A110.4
C9—N3—Cu1104.6 (4)N2—C8—H8B110.4
C10—N3—Cu1117.9 (4)C9—C8—H8B110.4
C9—N3—H3A106 (5)H8A—C8—H8B108.6
C10—N3—H3A111 (5)N3—C9—C8109.1 (5)
Cu1—N3—H3A104 (5)N3—C9—H9A109.9
C11—N4—Cu1160.6 (5)C8—C9—H9A109.9
N1—C1—C2122.8 (6)N3—C9—H9B109.9
N1—C1—H1118.6C8—C9—H9B109.9
C2—C1—H1118.6H9A—C9—H9B108.3
C1—C2—C3119.2 (7)N3—C10—H10A109.5
C1—C2—H2120.4N3—C10—H10B109.5
C3—C2—H2120.4H10A—C10—H10B109.5
C4—C3—C2119.1 (6)N3—C10—H10C109.5
C4—C3—H3120.5H10A—C10—H10C109.5
C2—C3—H3120.5H10B—C10—H10C109.5
C3—C4—C5118.7 (6)N4—C11—S1179.1 (6)
D—H···AD—HH···AD···AD—H···A
N3—H3A···Br1i0.90 (1)2.69 (4)3.494 (5)150 (6)
Table 1

Selected bond lengths (Å)

Cu1—N41.949 (5)
Cu1—N21.965 (5)
Cu1—N12.019 (5)
Cu1—N32.044 (5)
Cu1—Br12.7228 (10)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯Br1i0.90 (1)2.69 (4)3.494 (5)150 (6)

Symmetry code: (i) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-30

3.  {N,N-Dimethyl-N'-[phen-yl(2-pyrid-yl)methyl-ene]ethane-1,2-diamine-κN,N',N''}dithio-cyanato-κN,κS-copper(II).

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-21
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1.  {N,N'-Bis[1-(pyridin-2-yl)ethyl-idene]-propane-1,3-diamine}-(thio-cyanato-κN)copper(II) tetra-fluoridoborate.

Authors:  Li-Jun Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-11
  1 in total

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