Literature DB >> 21588087

Hexaaqua-cobalt(II) 3,3'-dicarb-oxy-biphenyl-4,4'-dicarboxyl-ate.

Yu-Hua Zhang, Jin-Mei Han, Zong-Ze Li.   

Abstract

In the crystal structure of the title compound, [Co(H(2)O)(6)](C(16)H(8)O(8)), both the cation and anion are centrosymmetric. The Co cation displays a CoO(6) octa-hedral geometry formed by six water mol-ecules. In the anion, the two carboxyl groups are oriented at dihedral angles of 4.8 (5) and 10.4 (7)° with respect to the benzene ring. Very strong O-H⋯O hydrogen bonds between the protonated and deprotonated carboxylate groups occur. Neighbouring cations and anions are connected through O-H⋯O hydrogen bonds into a three-dimensional supra-molecular structure.

Entities:  

Year:  2010        PMID: 21588087      PMCID: PMC3007239          DOI: 10.1107/S1600536810028771

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related metal complexes with the biphenyl-3,3′,4,4′-tetra­carboxyl­ate ligand, see: Sun et al. (2009 ▶); Wang et al. (2005 ▶, 2006 ▶). For the structures containing the 4,4′-dicarb­oxy­biphenyl-3,3′-dicarboxyl­ate ligand, see: Kang et al. (2009a ▶,b ▶); Zhu et al. (2008 ▶).

Experimental

Crystal data

[Co(H2O)6](C16H8O8) M = 495.25 Triclinic, a = 6.5197 (14) Å b = 7.9514 (17) Å c = 9.664 (2) Å α = 76.339 (2)° β = 87.656 (2)° γ = 86.221 (2)° V = 485.57 (18) Å3 Z = 1 Mo Kα radiation μ = 0.96 mm−1 T = 293 K 0.23 × 0.19 × 0.12 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.804, T max = 0.895 2871 measured reflections 1590 independent reflections 1305 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.169 S = 1.00 1590 reflections 146 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.47 e Å−3 Δρmin = −0.43 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810028771/xu2789sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810028771/xu2789Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(H2O)6](C16H8O8)Z = 1
Mr = 495.25F(000) = 255
Triclinic, P1Dx = 1.694 Mg m3
a = 6.5197 (14) ÅMo Kα radiation, λ = 0.71073 Å
b = 7.9514 (17) ÅCell parameters from 774 reflections
c = 9.664 (2) Åθ = 2.2–25.0°
α = 76.339 (2)°µ = 0.96 mm1
β = 87.656 (2)°T = 293 K
γ = 86.221 (2)°Block, pink
V = 485.57 (18) Å30.23 × 0.19 × 0.12 mm
Bruker APEXII CCD area-detector diffractometer1590 independent reflections
Radiation source: fine-focus sealed tube1305 reflections with I > 2σ(I)
graphiteRint = 0.028
φ and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −7→7
Tmin = 0.804, Tmax = 0.895k = −9→9
2871 measured reflectionsl = −11→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.169H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.1263P)2] where P = (Fo2 + 2Fc2)/3
1590 reflections(Δ/σ)max < 0.001
146 parametersΔρmax = 0.47 e Å3
1 restraintΔρmin = −0.43 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co11.00000.00000.50000.0281 (3)
O10.5091 (5)0.1808 (4)1.2457 (3)0.0408 (8)
O20.3077 (5)0.1278 (4)1.0880 (4)0.0396 (8)
O30.4682 (5)0.2634 (5)0.6417 (4)0.0494 (10)
O40.2791 (5)0.1755 (4)0.8356 (3)0.0417 (8)
O51.0135 (5)−0.0174 (5)0.2911 (3)0.0434 (9)
H5B0.9751−0.13020.28580.065*
H5C1.1512−0.00020.25370.065*
O61.2248 (5)0.1707 (5)0.4594 (4)0.0444 (9)
H6A1.30790.15410.54190.067*
H6C1.30890.15080.38030.067*
O70.7843 (5)0.2081 (4)0.4461 (4)0.0441 (9)
H7A0.67630.17600.39460.066*
H7C0.72770.23720.53140.066*
C10.6112 (6)0.2899 (5)1.0027 (4)0.0255 (9)
C20.7719 (6)0.3637 (5)1.0551 (5)0.0257 (9)
H2B0.78230.34631.15320.031*
C30.9157 (6)0.4613 (5)0.9679 (5)0.0267 (9)
C40.8945 (7)0.4888 (6)0.8216 (5)0.0336 (10)
H4B0.98500.55800.75990.040*
C50.7413 (7)0.4147 (6)0.7674 (5)0.0358 (11)
H5A0.73350.43240.66910.043*
C60.5974 (6)0.3144 (5)0.8535 (5)0.0279 (9)
C70.4682 (6)0.1923 (5)1.1202 (5)0.0288 (10)
C80.4405 (7)0.2462 (6)0.7705 (5)0.0311 (10)
H20.293 (12)0.152 (9)0.999 (2)0.10 (3)*
U11U22U33U12U13U23
Co10.0215 (5)0.0511 (6)0.0143 (5)−0.0164 (3)0.0002 (3)−0.0092 (4)
O10.0359 (17)0.070 (2)0.0193 (19)−0.0237 (16)0.0020 (14)−0.0103 (15)
O20.0344 (17)0.062 (2)0.025 (2)−0.0271 (15)0.0024 (15)−0.0103 (16)
O30.046 (2)0.087 (3)0.024 (2)−0.0326 (19)0.0002 (16)−0.0224 (17)
O40.0316 (17)0.066 (2)0.032 (2)−0.0238 (15)0.0005 (14)−0.0133 (16)
O50.0368 (18)0.077 (2)0.0222 (18)−0.0290 (16)0.0048 (14)−0.0167 (16)
O60.0373 (18)0.074 (2)0.028 (2)−0.0310 (16)0.0045 (15)−0.0191 (16)
O70.0361 (18)0.070 (2)0.0301 (19)−0.0101 (16)−0.0049 (15)−0.0162 (16)
C10.025 (2)0.032 (2)0.022 (2)−0.0069 (16)0.0007 (17)−0.0092 (17)
C20.026 (2)0.034 (2)0.018 (2)−0.0103 (17)−0.0028 (17)−0.0074 (17)
C30.024 (2)0.033 (2)0.024 (2)−0.0054 (17)−0.0038 (18)−0.0064 (17)
C40.038 (2)0.045 (2)0.022 (2)−0.023 (2)−0.0027 (19)−0.0090 (19)
C50.042 (3)0.045 (3)0.024 (3)−0.019 (2)−0.002 (2)−0.0117 (19)
C60.024 (2)0.034 (2)0.029 (3)−0.0078 (17)−0.0020 (18)−0.0103 (18)
C70.028 (2)0.037 (2)0.026 (3)−0.0109 (18)0.0014 (19)−0.0126 (18)
C80.029 (2)0.040 (2)0.029 (3)−0.0118 (19)−0.0047 (19)−0.0137 (19)
Co1—O52.054 (3)O7—H7A0.9600
Co1—O5i2.054 (3)O7—H7C0.9600
Co1—O62.027 (3)C1—C21.401 (6)
Co1—O6i2.027 (3)C1—C61.415 (6)
Co1—O72.082 (3)C1—C71.534 (6)
Co1—O7i2.082 (3)C2—C31.383 (6)
O1—C71.233 (5)C2—H2B0.9300
O2—C71.276 (5)C3—C41.390 (6)
O2—H20.85 (2)C3—C3ii1.516 (8)
O3—C81.226 (6)C4—C51.374 (6)
O4—C81.295 (5)C4—H4B0.9300
O5—H5B0.9600C5—C61.389 (6)
O5—H5C0.9601C5—H5A0.9300
O6—H6A0.9600C6—C81.526 (6)
O6—H6C0.9600
O6—Co1—O6i180.0C2—C1—C6118.3 (4)
O6—Co1—O590.40 (13)C2—C1—C7113.4 (4)
O6i—Co1—O589.60 (13)C6—C1—C7128.3 (4)
O6—Co1—O5i89.60 (13)C3—C2—C1123.2 (4)
O6i—Co1—O5i90.40 (13)C3—C2—H2B118.4
O5—Co1—O5i180.0C1—C2—H2B118.4
O6—Co1—O788.72 (14)C2—C3—C4117.5 (4)
O6i—Co1—O791.28 (14)C2—C3—C3ii120.3 (5)
O5—Co1—O789.16 (14)C4—C3—C3ii122.2 (5)
O5i—Co1—O790.84 (14)C5—C4—C3120.6 (4)
O6—Co1—O7i91.28 (14)C5—C4—H4B119.7
O6i—Co1—O7i88.72 (14)C3—C4—H4B119.7
O5—Co1—O7i90.83 (14)C4—C5—C6122.6 (4)
O5i—Co1—O7i89.17 (14)C4—C5—H5A118.7
O7—Co1—O7i180.000 (1)C6—C5—H5A118.7
C7—O2—H2111 (5)C5—C6—C1117.8 (4)
Co1—O5—H5B109.3C5—C6—C8113.7 (4)
Co1—O5—H5C109.4C1—C6—C8128.5 (4)
H5B—O5—H5C109.5O1—C7—O2120.9 (4)
Co1—O6—H6A109.3O1—C7—C1118.8 (4)
Co1—O6—H6C109.1O2—C7—C1120.3 (4)
H6A—O6—H6C109.5O3—C8—O4121.2 (4)
Co1—O7—H7A109.1O3—C8—C6118.9 (4)
Co1—O7—H7C109.5O4—C8—C6119.9 (4)
H7A—O7—H7C109.5
C6—C1—C2—C30.9 (6)C2—C1—C6—C8179.1 (4)
C7—C1—C2—C3−178.3 (4)C7—C1—C6—C8−1.9 (7)
C1—C2—C3—C41.4 (6)C2—C1—C7—O1−2.9 (6)
C1—C2—C3—C3ii179.4 (4)C6—C1—C7—O1178.0 (4)
C2—C3—C4—C5−2.8 (7)C2—C1—C7—O2175.6 (4)
C3ii—C3—C4—C5179.2 (5)C6—C1—C7—O2−3.5 (7)
C3—C4—C5—C62.0 (7)C5—C6—C8—O39.6 (6)
C4—C5—C6—C10.3 (7)C1—C6—C8—O3−171.2 (4)
C4—C5—C6—C8179.6 (4)C5—C6—C8—O4−168.7 (4)
C2—C1—C6—C5−1.8 (6)C1—C6—C8—O410.4 (7)
C7—C1—C6—C5177.3 (4)
D—H···AD—HH···AD···AD—H···A
O2—H2···O40.85 (2)1.55 (2)2.391 (5)173 (8)
O5—H5B···O4iii0.962.172.820 (5)124
O5—H5C···O2iv0.961.972.789 (4)142
O6—H6A···O3v0.961.842.676 (4)144
O6—H6C···O1iv0.961.792.708 (4)159
O7—H7A···O1vi0.961.832.749 (5)159
O7—H7C···O30.961.992.822 (5)144
Table 1

Selected bond lengths (Å)

Co1—O52.054 (3)
Co1—O62.027 (3)
Co1—O72.082 (3)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯O40.85 (2)1.55 (2)2.391 (5)173 (8)
O5—H5B⋯O4i0.962.172.820 (5)124
O5—H5C⋯O2ii0.961.972.789 (4)142
O6—H6A⋯O3iii0.961.842.676 (4)144
O6—H6C⋯O1ii0.961.792.708 (4)159
O7—H7A⋯O1iv0.961.832.749 (5)159
O7—H7C⋯O30.961.992.822 (5)144

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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2.  Diaqua-bis(2,2'-biimidazole)cobalt(II) 4,4'-dicarboxy-biphenyl-3,3'-di-car-boxylate.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-11

3.  Diaqua-bis(2,2'-biimidazole)zinc(II) 4,4'-di-carboxybiphenyl-3,3'-di-carboxyl-ate.

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