Literature DB >> 21582388

Diaqua-bis(2,2'-biimidazole)zinc(II) 4,4'-di-carboxybiphenyl-3,3'-di-carboxyl-ate.

Jie Kang, Chang-Cang Huang, Zhi-Qing Jiang, Sheng Huang, Shuang-Lu Huang.   

Abstract

In the title compound, [Zn(C(6)H(6)N(4))(2)(H(2)O)(2)](C(16)H(8)O(8)), the Zn(II) atom, located on an inversion centre, is coordinated by two aqua and two bidentate biimidizole ligands, resulting in a slightly distorted octa-hedral ZnO(2)N(4) geometry. The four N atoms from the two biimidizole ligands lie in the equatorial plane and the two aqua O atoms lie in the axial sites. The biphenyl-tetra-carboxyl-ate anion also lies on an inversion centre. The Zn(II) complex cation and the anion are held together by N-H⋯O hydrogen bonds, forming a zigzag chain along [21]. The chains are further connected by water mol-ecules via O-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21582388      PMCID: PMC2969031          DOI: 10.1107/S1600536809008022

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Hagrman et al. (1999 ▶); Jia et al. (2007 ▶); Kortz et al. (2003 ▶).

Experimental

Crystal data

[Zn(C6H6N4)2(H2O)2](C16H8O8) M = 697.92 Triclinic, a = 8.2133 (16) Å b = 9.810 (2) Å c = 10.498 (2) Å α = 63.72 (3)° β = 68.00 (3)° γ = 83.85 (3)° V = 701.4 (2) Å3 Z = 1 Mo Kα radiation μ = 0.95 mm−1 T = 293 K 0.12 × 0.10 × 0.08 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (; Bruker, 2001 ▶) T min = 0.894, T max = 0.928 5074 measured reflections 2674 independent reflections 2579 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.096 S = 1.00 2674 reflections 218 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809008022/is2385sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809008022/is2385Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C6H6N4)2(H2O)2](C16H8O8)Z = 1
Mr = 697.92F(000) = 358
Triclinic, P1Dx = 1.652 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.2133 (16) ÅCell parameters from 2674 reflections
b = 9.810 (2) Åθ = 3.4–26.0°
c = 10.498 (2) ŵ = 0.95 mm1
α = 63.72 (3)°T = 293 K
β = 68.00 (3)°Block, colorless
γ = 83.85 (3)°0.12 × 0.10 × 0.08 mm
V = 701.4 (2) Å3
Bruker APEXII CCD diffractometer2674 independent reflections
Radiation source: fine-focus sealed tube2579 reflections with I > 2σ(I)
graphiteRint = 0.022
φ and ω scansθmax = 26.0°, θmin = 3.4°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −9→10
Tmin = 0.894, Tmax = 0.928k = −12→12
5074 measured reflectionsl = −12→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.052P)2 + 0.4235P] where P = (Fo2 + 2Fc2)/3
2674 reflections(Δ/σ)max = 0.018
218 parametersΔρmax = 0.28 e Å3
1 restraintΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.50000.50000.00000.03706 (14)
C10.8917 (3)−0.0165 (3)0.6897 (3)0.0359 (5)
C20.7565 (3)0.0726 (2)0.6220 (2)0.0299 (4)
C30.6742 (3)−0.0082 (2)0.5790 (2)0.0317 (4)
H30.7113−0.10400.58870.038*
C40.5400 (3)0.0464 (2)0.5224 (2)0.0300 (4)
C50.4858 (3)0.1890 (3)0.5114 (3)0.0399 (5)
H50.39410.22880.47710.048*
C60.5668 (3)0.2719 (2)0.5509 (3)0.0392 (5)
H60.52800.36730.54150.047*
C70.7037 (3)0.2197 (2)0.6041 (2)0.0305 (4)
C80.7779 (3)0.3350 (3)0.6322 (3)0.0375 (5)
C90.7614 (3)0.3778 (2)0.1372 (2)0.0328 (4)
C100.7227 (3)0.2594 (2)0.1042 (2)0.0336 (5)
C110.5985 (3)0.1497 (3)0.0235 (3)0.0436 (6)
H190.52630.1307−0.01790.052*
C120.7149 (4)0.0538 (3)0.0759 (3)0.0473 (6)
H200.7368−0.04160.07710.057*
C130.8671 (3)0.5175 (3)0.2050 (3)0.0440 (6)
H210.93290.55240.24140.053*
C140.7403 (3)0.5901 (3)0.1520 (3)0.0436 (6)
H220.70410.68530.14560.052*
N10.7933 (3)0.1248 (2)0.1265 (2)0.0406 (4)
H1A0.86590.08210.17420.049*
N20.6044 (3)0.2788 (2)0.0414 (2)0.0366 (4)
N30.6732 (2)0.5025 (2)0.1091 (2)0.0372 (4)
N40.8794 (3)0.3831 (2)0.1946 (2)0.0402 (4)
H4A0.95380.31100.22110.048*
O10.9901 (3)0.0489 (2)0.7164 (3)0.0592 (5)
O20.9025 (2)−0.15120 (19)0.7137 (2)0.0528 (5)
O30.9163 (3)0.3100 (2)0.6670 (3)0.0576 (5)
O40.7063 (3)0.4532 (2)0.6186 (2)0.0536 (5)
O1W0.2826 (2)0.4101 (2)0.2126 (2)0.0517 (5)
H1W0.26800.43780.27820.078*
H2W0.23670.32770.24770.078*
H3A0.962 (5)0.217 (2)0.673 (5)0.100 (13)*
U11U22U33U12U13U23
Zn10.0416 (2)0.0294 (2)0.0549 (3)0.00961 (15)−0.03317 (18)−0.01971 (17)
C10.0359 (11)0.0351 (11)0.0469 (12)0.0071 (9)−0.0249 (10)−0.0197 (10)
C20.0321 (10)0.0270 (10)0.0351 (10)0.0038 (8)−0.0184 (9)−0.0129 (8)
C30.0346 (11)0.0260 (10)0.0424 (11)0.0073 (8)−0.0229 (9)−0.0155 (9)
C40.0355 (11)0.0254 (10)0.0351 (10)0.0042 (8)−0.0201 (9)−0.0130 (8)
C50.0489 (13)0.0323 (11)0.0604 (14)0.0156 (10)−0.0411 (12)−0.0242 (11)
C60.0502 (13)0.0280 (11)0.0542 (13)0.0122 (10)−0.0320 (11)−0.0220 (10)
C70.0349 (11)0.0284 (10)0.0343 (10)0.0029 (8)−0.0174 (9)−0.0152 (8)
C80.0452 (13)0.0319 (11)0.0446 (12)0.0026 (9)−0.0226 (10)−0.0195 (10)
C90.0317 (10)0.0327 (11)0.0402 (11)0.0070 (8)−0.0200 (9)−0.0166 (9)
C100.0349 (11)0.0291 (10)0.0396 (11)0.0059 (8)−0.0182 (9)−0.0145 (9)
C110.0566 (15)0.0321 (11)0.0559 (14)0.0036 (10)−0.0337 (12)−0.0201 (11)
C120.0608 (16)0.0309 (12)0.0636 (16)0.0106 (11)−0.0330 (13)−0.0253 (11)
C130.0460 (13)0.0461 (14)0.0579 (15)0.0050 (11)−0.0316 (12)−0.0281 (12)
C140.0490 (14)0.0380 (12)0.0640 (15)0.0105 (10)−0.0332 (12)−0.0308 (12)
N10.0456 (11)0.0326 (10)0.0545 (12)0.0137 (8)−0.0324 (10)−0.0192 (9)
N20.0418 (10)0.0300 (9)0.0489 (11)0.0083 (8)−0.0282 (9)−0.0181 (8)
N30.0394 (10)0.0347 (10)0.0532 (11)0.0105 (8)−0.0302 (9)−0.0233 (9)
N40.0394 (10)0.0393 (10)0.0552 (12)0.0115 (8)−0.0315 (9)−0.0223 (9)
O10.0659 (12)0.0518 (11)0.1051 (16)0.0251 (9)−0.0670 (12)−0.0479 (11)
O20.0539 (11)0.0330 (9)0.0920 (14)0.0141 (8)−0.0539 (11)−0.0248 (9)
O30.0620 (12)0.0441 (10)0.1003 (15)0.0128 (9)−0.0549 (12)−0.0412 (11)
O40.0706 (12)0.0399 (10)0.0807 (13)0.0161 (9)−0.0472 (11)−0.0387 (9)
O1W0.0637 (12)0.0427 (9)0.0564 (11)−0.0089 (8)−0.0204 (9)−0.0268 (8)
Zn1—O1W2.135 (2)C8—O31.288 (3)
Zn1—O1Wi2.135 (2)C9—N31.326 (3)
Zn1—N3i2.1419 (18)C9—N41.334 (3)
Zn1—N32.1419 (18)C9—C101.445 (3)
Zn1—N2i2.1625 (19)C10—N21.321 (3)
Zn1—N22.1625 (19)C10—N11.341 (3)
C1—O21.231 (3)C11—C121.358 (4)
C1—O11.258 (3)C11—N21.368 (3)
C1—C21.528 (3)C11—H190.9300
C2—C31.395 (3)C12—N11.364 (3)
C2—C71.411 (3)C12—H200.9300
C3—C41.392 (3)C13—C141.351 (4)
C3—H30.9300C13—N41.361 (3)
C4—C51.390 (3)C13—H210.9300
C4—C4ii1.490 (4)C14—N31.370 (3)
C5—C61.376 (3)C14—H220.9300
C5—H50.9300N1—H1A0.8755
C6—C71.391 (3)N4—H4A0.9008
C6—H60.9300O3—H3A0.93 (3)
C7—C81.522 (3)O1W—H1W0.8119
C8—O41.217 (3)O1W—H2W0.7930
O1W—Zn1—O1Wi180.00 (10)O4—C8—C7119.0 (2)
O1W—Zn1—N3i88.19 (8)O3—C8—C7120.8 (2)
O1Wi—Zn1—N3i91.81 (8)N3—C9—N4111.41 (19)
O1W—Zn1—N391.81 (8)N3—C9—C10119.57 (19)
O1Wi—Zn1—N388.19 (8)N4—C9—C10129.0 (2)
N3i—Zn1—N3180.0N2—C10—N1111.27 (19)
O1W—Zn1—N2i87.51 (8)N2—C10—C9119.67 (19)
O1Wi—Zn1—N2i92.49 (8)N1—C10—C9129.1 (2)
N3i—Zn1—N2i79.56 (7)C12—C11—N2109.2 (2)
N3—Zn1—N2i100.44 (7)C12—C11—H19125.4
O1W—Zn1—N292.49 (8)N2—C11—H19125.4
O1Wi—Zn1—N287.51 (8)C11—C12—N1106.6 (2)
N3i—Zn1—N2100.44 (7)C11—C12—H20126.7
N3—Zn1—N279.56 (7)N1—C12—H20126.7
N2i—Zn1—N2180.0C14—C13—N4106.3 (2)
O2—C1—O1122.0 (2)C14—C13—H21126.8
O2—C1—C2117.98 (19)N4—C13—H21126.8
O1—C1—C2120.0 (2)C13—C14—N3109.8 (2)
C3—C2—C7118.34 (19)C13—C14—H22125.1
C3—C2—C1113.56 (18)N3—C14—H22125.1
C7—C2—C1128.06 (18)C10—N1—C12107.05 (19)
C4—C3—C2123.86 (19)C10—N1—H1A128.5
C4—C3—H3118.1C12—N1—H1A124.1
C2—C3—H3118.1C10—N2—C11105.86 (19)
C5—C4—C3116.66 (19)C10—N2—Zn1110.26 (14)
C5—C4—C4ii122.8 (2)C11—N2—Zn1143.84 (16)
C3—C4—C4ii120.6 (2)C9—N3—C14105.05 (18)
C6—C5—C4120.6 (2)C9—N3—Zn1110.75 (14)
C6—C5—H5119.7C14—N3—Zn1143.92 (16)
C4—C5—H5119.7C9—N4—C13107.4 (2)
C5—C6—C7123.1 (2)C9—N4—H4A126.2
C5—C6—H6118.5C13—N4—H4A126.4
C7—C6—H6118.5C8—O3—H3A113 (3)
C6—C7—C2117.43 (18)Zn1—O1W—H1W121.7
C6—C7—C8113.31 (18)Zn1—O1W—H2W121.9
C2—C7—C8129.25 (19)H1W—O1W—H2W111.7
O4—C8—O3120.1 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1iii0.881.942.802 (3)169
N4—H4A···O2iii0.901.892.791 (3)176
O1W—H1W···O4iv0.811.902.683 (2)162
O1W—H2W···O2ii0.791.982.751 (3)164
O3—H3A···O10.93 (3)1.52 (3)2.434 (3)165 (4)
Table 1

Selected bond lengths (Å)

Zn1—O1W2.135 (2)
Zn1—N32.1419 (18)
Zn1—N22.1625 (19)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1i0.881.942.802 (3)169
N4—H4A⋯O2i0.901.892.791 (3)176
O1W—H1W⋯O4ii0.811.902.683 (2)162
O1W—H2W⋯O2iii0.791.982.751 (3)164
O3—H3A⋯O10.93 (3)1.52 (3)2.434 (3)165 (4)

Symmetry codes: (i) ; (ii) ; (iii) .

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