Literature DB >> 21582332

Diaqua-bis(2,2'-biimidazole)cobalt(II) 4,4'-dicarboxy-biphenyl-3,3'-di-car-boxylate.

Jie Kang, Chang-Cang Huang, Lai-Sheng Zhai, Xiao-Huan Qin, Zhong-Qian Liu.   

Abstract

In the title compound, [n class="Chemical">Co(C(6)H(6)N(4))(2)(H(2)O)(2)](C(16)H(8)O(8)), the Co(II) cation and the organic anion occupy different crystallographic inversion centres and, as a consequence, the asymmetric unit comprises two half-mol-ecules. The benzene groups are coplanar. The four coordinating N atoms of the two bidentate biimidazole ligands define the equatorial plane of a slightly distorted octa-hedral CoO(2)N(4) geometry, and the water O atoms lie in the axial coordination sites. Translational (a,) and inversion-related symmetry operations link the Co complex mol-ecules and the negatively charged carboxyl-ate anions via inter-molecular N-H⋯O and O-H⋯O hydrogen bonds into sheets parallel to (01). The coordinated water mol-ecules connect the sheets through O-H⋯O hydrogen bonds, forming a three-dimensional framework. In addition, two intra-molecular O-H⋯O hydrogen bonds are observed between the carboxyl and carboxyl-ate groups.

Entities:  

Year:  2009        PMID: 21582332      PMCID: PMC2968794          DOI: 10.1107/S1600536809007764

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a review on organic–inorganic hybrid materials, see: Hagrman et al. (1999 ▶). For a tetra­nuclear cobalt n class="Chemical">complex with a 1,2,4-benzene­tricarboxyl­ate linker, see: Jia et al. (2007 ▶). For a highly porous metal-organic framework with a benzene­dicarboxyl­ate linker, see: Li et al. (1999 ▶). For coordination polymers of Ag(I), Cd(II) and Zn(II) with the flexible 2-(1H-imidazole-1-yl)acetic acid linker, see: Wang et al. (2007 ▶). For the structure of 1,1′-biphenyl-2,3,3′,4′-tetra­carboxylic acid monohydrate and related structures cited therein, see: Jiang et al. (2008 ▶).

Experimental

Crystal data

[Co(C6n class="Species">H6N4)2(H2O)2](C16H8O8) M = 691.48 Triclinic, a = 8.2272 (16) Å b = 9.772 (2) Å c = 10.484 (2) Å α = 63.81 (3)° β = 67.93 (3)° γ = 84.03 (3)° V = 699.0 (2) Å3 Z = 1 Mo Kα radiation μ = 0.69 mm−1 T = 293 K 0.42 × 0.26 × 0.20 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.760, T max = 0.874 4982 measured reflections 2603 independent reflections 2527 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.087 S = 1.01 2603 reflections 227 parameters 5 restraints H atoms treated by a mixture of independent and n class="Chemical">constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinen class="Species">ment: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809007764/si2153sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007764/si2153Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C6H6N4)2(H2O)2](C16H8O8)Z = 1
Mr = 691.48F(000) = 355
Triclinic, P1Dx = 1.643 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.2272 (16) ÅCell parameters from 2603 reflections
b = 9.772 (2) Åθ = 3.1–25.8°
c = 10.484 (2) ŵ = 0.69 mm1
α = 63.81 (3)°T = 293 K
β = 67.93 (3)°Block, colorless
γ = 84.03 (3)°0.42 × 0.26 × 0.20 mm
V = 699.0 (2) Å3
Bruker APEXII CCD area-detector diffractometer2603 independent reflections
Radiation source: fine-focus sealed tube2527 reflections with I > 2σ(I)
graphiteRint = 0.022
φ and ω scansθmax = 25.8°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −10→9
Tmin = 0.760, Tmax = 0.874k = −11→11
4982 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.045P)2 + 0.376P] where P = (Fo2 + 2Fc2)/3
2603 reflections(Δ/σ)max = 0.001
227 parametersΔρmax = 0.31 e Å3
5 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.50000.50000.50000.03059 (13)
C10.7400 (3)0.5910 (2)0.6513 (3)0.0388 (5)
H10.70360.68650.64460.047*
C20.8671 (3)0.5187 (2)0.7049 (3)0.0403 (5)
H20.93230.55420.74150.048*
C30.7617 (2)0.3779 (2)0.6368 (2)0.0303 (4)
C40.7231 (2)0.2591 (2)0.6037 (2)0.0305 (4)
C50.5986 (3)0.1500 (2)0.5229 (3)0.0396 (5)
H50.52660.13110.48120.047*
C60.7143 (3)0.0532 (2)0.5751 (3)0.0428 (5)
H60.7355−0.04250.57620.051*
C70.2215 (3)0.6649 (2)0.8670 (2)0.0355 (4)
C80.2957 (2)0.7806 (2)0.8950 (2)0.0300 (4)
C90.4327 (3)0.7276 (2)0.9485 (2)0.0372 (5)
H90.47100.63190.95770.045*
C100.5135 (3)0.8106 (2)0.9882 (3)0.0383 (5)
H100.60510.77081.02220.046*
C110.4595 (2)0.9535 (2)0.9779 (2)0.0289 (4)
C120.3260 (2)1.0084 (2)0.9211 (2)0.0301 (4)
H120.28941.10460.91160.036*
C130.2436 (2)0.9278 (2)0.8777 (2)0.0279 (4)
C140.1084 (2)1.0170 (2)0.8107 (2)0.0330 (4)
N10.6735 (2)0.50249 (18)0.60857 (19)0.0340 (4)
N20.8799 (2)0.3839 (2)0.6943 (2)0.0365 (4)
H2A0.951 (3)0.307 (2)0.726 (2)0.044*
N30.6043 (2)0.27901 (17)0.54115 (19)0.0335 (4)
N40.7934 (2)0.12422 (19)0.6258 (2)0.0371 (4)
H4A0.869 (2)0.078 (2)0.676 (2)0.045*
O10.0983 (2)1.15279 (16)0.7860 (2)0.0492 (4)
O20.0097 (2)0.95144 (19)0.7838 (2)0.0552 (5)
O30.0823 (2)0.68970 (19)0.8329 (2)0.0546 (4)
H30.05130.77490.82410.082*
O40.2931 (2)0.54625 (18)0.8800 (2)0.0500 (4)
O50.7116 (2)0.58986 (18)0.29083 (18)0.0469 (4)
H1W0.763 (3)0.6721 (18)0.259 (3)0.056*
H2W0.730 (3)0.557 (2)0.228 (2)0.056*
U11U22U33U12U13U23
Co10.0353 (2)0.0244 (2)0.0457 (2)0.00797 (14)−0.02832 (17)−0.01710 (17)
C10.0454 (11)0.0331 (11)0.0579 (13)0.0098 (9)−0.0324 (10)−0.0271 (10)
C20.0445 (11)0.0408 (12)0.0564 (13)0.0074 (9)−0.0326 (10)−0.0281 (10)
C30.0306 (9)0.0293 (10)0.0390 (10)0.0070 (7)−0.0211 (8)−0.0158 (8)
C40.0343 (10)0.0251 (9)0.0380 (10)0.0072 (7)−0.0206 (8)−0.0140 (8)
C50.0514 (12)0.0301 (10)0.0528 (12)0.0054 (9)−0.0327 (10)−0.0206 (9)
C60.0559 (13)0.0272 (10)0.0599 (13)0.0106 (9)−0.0321 (11)−0.0240 (10)
C70.0417 (11)0.0327 (11)0.0414 (11)0.0038 (8)−0.0214 (9)−0.0194 (9)
C80.0341 (9)0.0292 (10)0.0327 (9)0.0033 (7)−0.0170 (8)−0.0150 (8)
C90.0479 (11)0.0277 (10)0.0519 (12)0.0141 (8)−0.0317 (10)−0.0222 (9)
C100.0468 (11)0.0320 (10)0.0561 (12)0.0159 (9)−0.0388 (10)−0.0227 (9)
C110.0341 (9)0.0250 (9)0.0348 (9)0.0058 (7)−0.0202 (8)−0.0139 (8)
C120.0337 (9)0.0254 (9)0.0389 (10)0.0071 (7)−0.0210 (8)−0.0153 (8)
C130.0286 (9)0.0276 (9)0.0326 (9)0.0043 (7)−0.0176 (7)−0.0126 (8)
C140.0321 (10)0.0332 (11)0.0443 (11)0.0072 (8)−0.0229 (8)−0.0197 (9)
N10.0382 (9)0.0291 (9)0.0491 (10)0.0093 (7)−0.0287 (8)−0.0205 (8)
N20.0371 (9)0.0364 (9)0.0505 (10)0.0116 (7)−0.0303 (8)−0.0215 (8)
N30.0399 (9)0.0260 (8)0.0451 (9)0.0066 (7)−0.0273 (8)−0.0159 (7)
N40.0416 (9)0.0299 (9)0.0503 (10)0.0115 (7)−0.0286 (8)−0.0187 (8)
O10.0495 (9)0.0308 (8)0.0865 (12)0.0132 (7)−0.0501 (9)−0.0234 (8)
O20.0614 (10)0.0485 (9)0.0989 (13)0.0239 (8)−0.0639 (10)−0.0445 (9)
O30.0583 (10)0.0429 (9)0.0953 (13)0.0131 (7)−0.0519 (10)−0.0402 (10)
O40.0654 (10)0.0392 (9)0.0746 (11)0.0165 (7)−0.0444 (9)−0.0368 (8)
O50.0579 (10)0.0382 (9)0.0516 (9)−0.0085 (7)−0.0184 (8)−0.0244 (7)
Co1—O5i2.0882 (19)C7—O41.220 (3)
Co1—O52.0882 (19)C7—O31.293 (2)
Co1—N12.1412 (16)C7—C81.519 (3)
Co1—N1i2.1412 (16)C8—C91.397 (3)
Co1—N3i2.1579 (16)C8—C131.410 (3)
Co1—N32.1579 (16)C9—C101.375 (3)
C1—C21.359 (3)C9—H90.9300
C1—N11.369 (2)C10—C111.390 (3)
C1—H10.9300C10—H100.9300
C2—N21.360 (3)C11—C121.391 (3)
C2—H20.9300C11—C11ii1.490 (3)
C3—N11.325 (2)C12—C131.395 (3)
C3—N21.340 (2)C12—H120.9300
C3—C41.444 (3)C13—C141.528 (3)
C4—N31.324 (2)C14—O11.235 (2)
C4—N41.341 (2)C14—O21.261 (2)
C5—C61.360 (3)N2—H2A0.921 (10)
C5—N31.364 (2)N4—H4A0.918 (10)
C5—H50.9300O3—H30.8200
C6—N41.366 (3)O5—H1W0.82 (2)
C6—H60.9300O5—H2W0.81 (2)
O5i—Co1—O5180C13—C8—C7129.44 (17)
O5i—Co1—N191.68 (7)C10—C9—C8122.91 (18)
O5—Co1—N188.32 (7)C10—C9—H9118.5
O5i—Co1—N1i88.32 (7)C8—C9—H9118.5
N1—Co1—N1i180C9—C10—C11120.56 (18)
O5i—Co1—N3i87.82 (7)C9—C10—H10119.7
O5—Co1—N3i92.18 (7)C11—C10—H10119.7
N1—Co1—N3i100.77 (6)C10—C11—C12116.73 (17)
N1i—Co1—N3i79.23 (6)C10—C11—C11ii122.6 (2)
O5i—Co1—N392.18 (7)C12—C11—C11ii120.7 (2)
O5—Co1—N387.82 (7)C11—C12—C13123.93 (17)
N1—Co1—N379.23 (6)C11—C12—H12118.0
N3i—Co1—N3180C13—C12—H12118.0
C2—C1—N1109.90 (17)C12—C13—C8118.32 (16)
C2—C1—H1125.0C12—C13—C14113.67 (16)
N1—C1—H1125.0C8—C13—C14127.98 (16)
N2—C2—C1106.11 (17)O1—C14—O2121.81 (18)
N2—C2—H2126.9O1—C14—C13118.10 (17)
C1—C2—H2126.9O2—C14—C13120.09 (17)
N1—C3—N2111.51 (17)C3—N1—C1105.05 (16)
N1—C3—C4119.29 (16)C3—N1—Co1111.21 (12)
N2—C3—C4129.20 (17)C1—N1—Co1143.48 (13)
N3—C4—N4111.61 (17)C3—N2—C2107.42 (17)
N3—C4—C3119.34 (16)C3—N2—H2A125.3 (15)
N4—C4—C3129.05 (17)C2—N2—H2A127.2 (15)
C6—C5—N3109.48 (18)C4—N3—C5105.57 (16)
C6—C5—H5125.3C4—N3—Co1110.75 (12)
N3—C5—H5125.3C5—N3—Co1143.64 (14)
C5—C6—N4106.57 (17)C4—N4—C6106.77 (17)
C5—C6—H6126.7C4—N4—H4A129.4 (15)
N4—C6—H6126.7C6—N4—H4A123.4 (15)
O4—C7—O3120.13 (18)C7—O3—H3109.5
O4—C7—C8119.10 (18)Co1—O5—H1W121.0 (16)
O3—C7—C8120.75 (17)Co1—O5—H2W121.0 (16)
C9—C8—C13117.47 (17)H1W—O5—H2W116.1 (17)
C9—C8—C7113.08 (16)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O1iii0.92 (2)1.87 (2)2.791 (3)179 (2)
N4—H4A···O2iii0.92 (2)1.90 (2)2.808 (3)170 (2)
O5—H1W···O1iv0.82 (2)1.93 (2)2.739 (3)169 (2)
O5—H2W···O4i0.81 (2)1.88 (2)2.673 (3)163 (2)
O3—H3···O20.821.622.432 (3)172
Co1—O52.0882 (19)
Co1—N12.1412 (16)
Co1—N32.1579 (16)
O5—Co1—N188.32 (7)
N1—Co1—N3i100.77 (6)
O5—Co1—N387.82 (7)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O1ii0.92 (2)1.87 (2)2.791 (3)178.8 (18)
N4—H4A⋯O2ii0.920 (18)1.897 (19)2.808 (3)170.3 (19)
O5—H1W⋯O1iii0.82 (2)1.93 (2)2.739 (3)169 (2)
O5—H2W⋯O4i0.81 (2)1.88 (2)2.673 (3)163 (2)
O3—H3⋯O20.821.622.432 (3)172

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Organic-Inorganic Hybrid Materials: From "Simple" Coordination Polymers to Organodiamine-Templated Molybdenum Oxides.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  1999-09       Impact factor: 15.336

3.  1,1'-Biphenyl-2,3,3',4'-tetra-carboxylic acid monohydrate.

Authors:  Yan Jiang; Jian Men; Chong-Yi Liu; Yan Zhang; Guo-Wei Gao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-16
  3 in total
  1 in total

1.  Hexaaqua-cobalt(II) 3,3'-dicarb-oxy-biphenyl-4,4'-dicarboxyl-ate.

Authors:  Yu-Hua Zhang; Jin-Mei Han; Zong-Ze Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-24
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.