| Literature DB >> 21587984 |
Mehmet Akkurt, Ismail Celik, Hasan Küçükbay, Nihat Sireci, Orhan Büyükgüngör.
Abstract
The title compound, C(18)H(23)N(2)Si(+)·Cl(-)·H(2)O, was synthesized from 1-[(trimethyl-sil-yl)meth-yl]benzimidazole and benzyl chloride in dimethyl-formamide. The benzimidazole ring system is approximately planar, with a maximum deviation of 0.022 (2) Å, and makes an angle of 74.80 (12)° with the phenyl ring. The crystal packing is stabilized by O-H⋯Cl, C-H⋯Cl, C-H⋯O and C-H⋯π inter-actions between symmetry-related mol-ecules together with π-π stacking inter-actions between the imidazolium and benzene rings [centroid-centroid distance = 3.5690 (15) Å] and between the benzene rings [centroid-centroid distance = 3.7223 (14) Å].Entities:
Year: 2010 PMID: 21587984 PMCID: PMC3007035 DOI: 10.1107/S1600536810024128
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H23N2Si+·Cl−·H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 28124 reflections | |
| θ = 2.1–28.0° | |
| µ = 0.27 mm−1 | |
| α = 117.594 (6)° | |
| β = 103.295 (6)° | Prism, colourless |
| γ = 92.094 (6)° | 0.57 × 0.50 × 0.36 mm |
| Stoe IPDS 2 diffractometer | 3987 independent reflections |
| Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus | 3241 reflections with |
| plane graphite | |
| Detector resolution: 6.67 pixels mm-1 | θmax = 26.5°, θmin = 2.1° |
| ω scans | |
| Absorption correction: integration ( | |
| 12149 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3987 reflections | (Δ/σ)max < 0.001 |
| 211 parameters | Δρmax = 0.32 e Å−3 |
| 0 restraints | Δρmin = −0.32 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement on |
| Si1 | 0.53328 (7) | 0.20172 (7) | 0.79168 (6) | 0.05705 (19) | |
| N1 | 0.72385 (17) | 0.36741 (17) | 0.52896 (17) | 0.0466 (4) | |
| N2 | 0.59349 (17) | 0.36730 (17) | 0.66907 (17) | 0.0466 (4) | |
| C1 | 0.4923 (2) | 0.33506 (19) | 0.54087 (19) | 0.0428 (4) | |
| C2 | 0.3377 (2) | 0.3101 (2) | 0.4971 (2) | 0.0521 (5) | |
| H2 | 0.2816 | 0.3104 | 0.5566 | 0.063* | |
| C3 | 0.2721 (2) | 0.2847 (2) | 0.3611 (2) | 0.0587 (5) | |
| H3 | 0.1688 | 0.2667 | 0.3276 | 0.070* | |
| C4 | 0.3560 (2) | 0.2853 (3) | 0.2717 (2) | 0.0592 (5) | |
| H4 | 0.3071 | 0.2682 | 0.1806 | 0.071* | |
| C5 | 0.5084 (2) | 0.3104 (2) | 0.3150 (2) | 0.0532 (5) | |
| H5 | 0.5641 | 0.3111 | 0.2555 | 0.064* | |
| C6 | 0.57570 (19) | 0.33479 (19) | 0.4512 (2) | 0.0432 (4) | |
| C7 | 0.7293 (2) | 0.3855 (2) | 0.6574 (2) | 0.0505 (5) | |
| H7 | 0.8165 | 0.4079 | 0.7293 | 0.061* | |
| C8 | 0.8534 (2) | 0.3833 (2) | 0.4794 (2) | 0.0547 (5) | |
| H8A | 0.9413 | 0.4273 | 0.5602 | 0.066* | |
| H8B | 0.8371 | 0.4442 | 0.4377 | 0.066* | |
| C9 | 0.8803 (2) | 0.2461 (2) | 0.3720 (2) | 0.0510 (5) | |
| C10 | 0.8520 (3) | 0.2111 (3) | 0.2308 (3) | 0.0717 (7) | |
| H10 | 0.8171 | 0.2741 | 0.2014 | 0.086* | |
| C11 | 0.8748 (3) | 0.0831 (4) | 0.1329 (3) | 0.0935 (10) | |
| H11 | 0.8546 | 0.0600 | 0.0377 | 0.112* | |
| C12 | 0.9272 (3) | −0.0100 (3) | 0.1753 (4) | 0.0947 (10) | |
| H12 | 0.9404 | −0.0970 | 0.1089 | 0.114* | |
| C13 | 0.9600 (3) | 0.0255 (3) | 0.3158 (4) | 0.0909 (10) | |
| H13 | 0.9980 | −0.0367 | 0.3451 | 0.109* | |
| C14 | 0.9372 (3) | 0.1527 (3) | 0.4141 (3) | 0.0700 (7) | |
| H14 | 0.9602 | 0.1760 | 0.5095 | 0.084* | |
| C15 | 0.5549 (3) | 0.3754 (2) | 0.7947 (2) | 0.0549 (5) | |
| H15A | 0.4625 | 0.4122 | 0.8003 | 0.066* | |
| H15B | 0.6320 | 0.4406 | 0.8796 | 0.066* | |
| C16 | 0.3837 (3) | 0.0757 (3) | 0.6328 (3) | 0.0812 (8) | |
| H16A | 0.4063 | 0.0662 | 0.5487 | 0.122* | |
| H16B | 0.2907 | 0.1090 | 0.6377 | 0.122* | |
| H16C | 0.3767 | −0.0135 | 0.6297 | 0.122* | |
| C17 | 0.4849 (4) | 0.2374 (4) | 0.9569 (3) | 0.1001 (10) | |
| H17A | 0.4744 | 0.1524 | 0.9619 | 0.150* | |
| H17B | 0.3928 | 0.2732 | 0.9569 | 0.150* | |
| H17C | 0.5624 | 0.3050 | 1.0376 | 0.150* | |
| C18 | 0.7121 (3) | 0.1391 (3) | 0.7877 (3) | 0.0899 (9) | |
| H18A | 0.7028 | 0.0478 | 0.7796 | 0.135* | |
| H18B | 0.7869 | 0.2023 | 0.8737 | 0.135* | |
| H18C | 0.7403 | 0.1344 | 0.7076 | 0.135* | |
| O1 | 0.9113 (3) | 0.6314 (2) | 0.9603 (2) | 0.1024 (7) | |
| H1A | 0.9910 | 0.6000 | 0.9420 | 0.154* | |
| H1B | 0.9090 | 0.6350 | 1.0380 | 0.154* | |
| Cl1 | 1.14370 (9) | 0.44812 (10) | 0.80296 (8) | 0.0961 (3) |
| Si1 | 0.0616 (4) | 0.0668 (4) | 0.0477 (3) | 0.0106 (3) | 0.0191 (3) | 0.0301 (3) |
| N1 | 0.0349 (8) | 0.0565 (9) | 0.0533 (9) | 0.0048 (7) | 0.0145 (7) | 0.0295 (8) |
| N2 | 0.0448 (9) | 0.0524 (9) | 0.0460 (8) | 0.0074 (7) | 0.0162 (7) | 0.0251 (7) |
| C1 | 0.0401 (9) | 0.0458 (9) | 0.0466 (9) | 0.0086 (7) | 0.0162 (8) | 0.0238 (8) |
| C2 | 0.0404 (10) | 0.0611 (12) | 0.0632 (12) | 0.0110 (9) | 0.0240 (9) | 0.0324 (10) |
| C3 | 0.0358 (10) | 0.0717 (14) | 0.0673 (13) | 0.0081 (9) | 0.0120 (9) | 0.0339 (11) |
| C4 | 0.0471 (12) | 0.0770 (14) | 0.0527 (11) | 0.0088 (10) | 0.0087 (9) | 0.0333 (11) |
| C5 | 0.0486 (11) | 0.0686 (13) | 0.0516 (11) | 0.0106 (9) | 0.0193 (9) | 0.0340 (10) |
| C6 | 0.0343 (9) | 0.0484 (10) | 0.0507 (10) | 0.0068 (7) | 0.0145 (8) | 0.0260 (8) |
| C7 | 0.0418 (10) | 0.0554 (11) | 0.0511 (11) | 0.0031 (8) | 0.0079 (8) | 0.0260 (9) |
| C8 | 0.0360 (10) | 0.0667 (13) | 0.0736 (13) | 0.0050 (9) | 0.0216 (9) | 0.0412 (11) |
| C9 | 0.0311 (9) | 0.0671 (12) | 0.0673 (12) | 0.0090 (8) | 0.0197 (9) | 0.0400 (10) |
| C10 | 0.0529 (13) | 0.1023 (19) | 0.0737 (15) | 0.0312 (13) | 0.0236 (12) | 0.0498 (15) |
| C11 | 0.0647 (17) | 0.126 (3) | 0.0702 (17) | 0.0308 (17) | 0.0212 (14) | 0.0299 (17) |
| C12 | 0.0684 (18) | 0.0793 (19) | 0.120 (3) | 0.0195 (15) | 0.0432 (18) | 0.0266 (18) |
| C13 | 0.087 (2) | 0.088 (2) | 0.146 (3) | 0.0402 (16) | 0.069 (2) | 0.077 (2) |
| C14 | 0.0671 (15) | 0.0864 (17) | 0.0943 (18) | 0.0279 (13) | 0.0444 (14) | 0.0631 (15) |
| C15 | 0.0599 (12) | 0.0622 (12) | 0.0420 (10) | 0.0129 (10) | 0.0203 (9) | 0.0217 (9) |
| C16 | 0.0781 (18) | 0.0771 (17) | 0.0790 (17) | −0.0077 (13) | 0.0151 (14) | 0.0347 (14) |
| C17 | 0.142 (3) | 0.111 (2) | 0.0703 (17) | 0.022 (2) | 0.0513 (19) | 0.0526 (17) |
| C18 | 0.0818 (19) | 0.093 (2) | 0.088 (2) | 0.0247 (16) | 0.0135 (16) | 0.0423 (17) |
| O1 | 0.1114 (17) | 0.0974 (15) | 0.0822 (13) | 0.0288 (13) | 0.0144 (12) | 0.0355 (12) |
| Cl1 | 0.0818 (5) | 0.1278 (7) | 0.0780 (5) | 0.0348 (4) | 0.0259 (4) | 0.0465 (4) |
| Si1—C18 | 1.834 (3) | C9—C10 | 1.378 (3) |
| Si1—C17 | 1.850 (3) | C9—C14 | 1.383 (3) |
| Si1—C16 | 1.852 (3) | C10—C11 | 1.380 (4) |
| Si1—C15 | 1.890 (2) | C10—H10 | 0.9300 |
| N1—C7 | 1.328 (3) | C11—C12 | 1.368 (5) |
| N1—C6 | 1.386 (2) | C11—H11 | 0.9300 |
| N1—C8 | 1.476 (2) | C12—C13 | 1.367 (5) |
| N2—C7 | 1.324 (2) | C12—H12 | 0.9300 |
| N2—C1 | 1.387 (2) | C13—C14 | 1.376 (4) |
| N2—C15 | 1.478 (2) | C13—H13 | 0.9300 |
| C1—C2 | 1.389 (3) | C14—H14 | 0.9300 |
| C1—C6 | 1.394 (2) | C15—H15A | 0.9700 |
| C2—C3 | 1.374 (3) | C15—H15B | 0.9700 |
| C2—H2 | 0.9300 | C16—H16A | 0.9600 |
| C3—C4 | 1.398 (3) | C16—H16B | 0.9600 |
| C3—H3 | 0.9300 | C16—H16C | 0.9600 |
| C4—C5 | 1.369 (3) | C17—H17A | 0.9600 |
| C4—H4 | 0.9300 | C17—H17B | 0.9600 |
| C5—C6 | 1.384 (3) | C17—H17C | 0.9600 |
| C5—H5 | 0.9300 | C18—H18A | 0.9600 |
| C7—H7 | 0.9300 | C18—H18B | 0.9600 |
| C8—C9 | 1.497 (3) | C18—H18C | 0.9600 |
| C8—H8A | 0.9700 | O1—H1A | 0.8598 |
| C8—H8B | 0.9700 | O1—H1B | 0.8466 |
| C18—Si1—C17 | 111.82 (16) | C14—C9—C8 | 120.0 (2) |
| C18—Si1—C16 | 110.58 (15) | C9—C10—C11 | 120.5 (3) |
| C17—Si1—C16 | 110.93 (16) | C9—C10—H10 | 119.8 |
| C18—Si1—C15 | 107.44 (14) | C11—C10—H10 | 119.8 |
| C17—Si1—C15 | 105.86 (13) | C12—C11—C10 | 120.2 (3) |
| C16—Si1—C15 | 110.04 (12) | C12—C11—H11 | 119.9 |
| C7—N1—C6 | 108.20 (15) | C10—C11—H11 | 119.9 |
| C7—N1—C8 | 125.70 (17) | C13—C12—C11 | 119.7 (3) |
| C6—N1—C8 | 126.08 (16) | C13—C12—H12 | 120.1 |
| C7—N2—C1 | 108.16 (15) | C11—C12—H12 | 120.1 |
| C7—N2—C15 | 126.39 (17) | C12—C13—C14 | 120.4 (3) |
| C1—N2—C15 | 125.43 (16) | C12—C13—H13 | 119.8 |
| N2—C1—C2 | 131.97 (17) | C14—C13—H13 | 119.8 |
| N2—C1—C6 | 106.56 (16) | C13—C14—C9 | 120.4 (3) |
| C2—C1—C6 | 121.45 (18) | C13—C14—H14 | 119.8 |
| C3—C2—C1 | 116.40 (18) | C9—C14—H14 | 119.8 |
| C3—C2—H2 | 121.8 | N2—C15—Si1 | 113.64 (13) |
| C1—C2—H2 | 121.8 | N2—C15—H15A | 108.8 |
| C2—C3—C4 | 122.03 (19) | Si1—C15—H15A | 108.8 |
| C2—C3—H3 | 119.0 | N2—C15—H15B | 108.8 |
| C4—C3—H3 | 119.0 | Si1—C15—H15B | 108.8 |
| C5—C4—C3 | 121.6 (2) | H15A—C15—H15B | 107.7 |
| C5—C4—H4 | 119.2 | Si1—C16—H16A | 109.5 |
| C3—C4—H4 | 119.2 | Si1—C16—H16B | 109.5 |
| C4—C5—C6 | 116.92 (18) | H16A—C16—H16B | 109.5 |
| C4—C5—H5 | 121.5 | Si1—C16—H16C | 109.5 |
| C6—C5—H5 | 121.5 | H16A—C16—H16C | 109.5 |
| C5—C6—N1 | 131.92 (17) | H16B—C16—H16C | 109.5 |
| C5—C6—C1 | 121.62 (17) | Si1—C17—H17A | 109.5 |
| N1—C6—C1 | 106.41 (16) | Si1—C17—H17B | 109.5 |
| N2—C7—N1 | 110.68 (17) | H17A—C17—H17B | 109.5 |
| N2—C7—H7 | 124.7 | Si1—C17—H17C | 109.5 |
| N1—C7—H7 | 124.7 | H17A—C17—H17C | 109.5 |
| N1—C8—C9 | 112.22 (16) | H17B—C17—H17C | 109.5 |
| N1—C8—H8A | 109.2 | Si1—C18—H18A | 109.5 |
| C9—C8—H8A | 109.2 | Si1—C18—H18B | 109.5 |
| N1—C8—H8B | 109.2 | H18A—C18—H18B | 109.5 |
| C9—C8—H8B | 109.2 | Si1—C18—H18C | 109.5 |
| H8A—C8—H8B | 107.9 | H18A—C18—H18C | 109.5 |
| C10—C9—C14 | 118.7 (2) | H18B—C18—H18C | 109.5 |
| C10—C9—C8 | 121.3 (2) | H1A—O1—H1B | 107.0 |
| C7—N2—C1—C2 | −178.0 (2) | C15—N2—C7—N1 | 178.44 (17) |
| C15—N2—C1—C2 | 3.6 (3) | C6—N1—C7—N2 | −0.3 (2) |
| C7—N2—C1—C6 | 0.1 (2) | C8—N1—C7—N2 | 178.18 (18) |
| C15—N2—C1—C6 | −178.27 (17) | C7—N1—C8—C9 | 109.6 (2) |
| N2—C1—C2—C3 | 178.1 (2) | C6—N1—C8—C9 | −72.2 (2) |
| C6—C1—C2—C3 | 0.2 (3) | N1—C8—C9—C10 | 108.7 (2) |
| C1—C2—C3—C4 | −0.6 (3) | N1—C8—C9—C14 | −72.5 (2) |
| C2—C3—C4—C5 | 0.4 (4) | C14—C9—C10—C11 | 2.3 (4) |
| C3—C4—C5—C6 | 0.2 (3) | C8—C9—C10—C11 | −178.8 (2) |
| C4—C5—C6—N1 | −177.7 (2) | C9—C10—C11—C12 | −0.5 (4) |
| C4—C5—C6—C1 | −0.6 (3) | C10—C11—C12—C13 | −1.5 (5) |
| C7—N1—C6—C5 | 177.7 (2) | C11—C12—C13—C14 | 1.7 (5) |
| C8—N1—C6—C5 | −0.7 (3) | C12—C13—C14—C9 | 0.2 (4) |
| C7—N1—C6—C1 | 0.3 (2) | C10—C9—C14—C13 | −2.2 (3) |
| C8—N1—C6—C1 | −178.13 (17) | C8—C9—C14—C13 | 179.0 (2) |
| N2—C1—C6—C5 | −177.97 (18) | C7—N2—C15—Si1 | −91.7 (2) |
| C2—C1—C6—C5 | 0.4 (3) | C1—N2—C15—Si1 | 86.4 (2) |
| N2—C1—C6—N1 | −0.2 (2) | C18—Si1—C15—N2 | 60.61 (19) |
| C2—C1—C6—N1 | 178.10 (18) | C17—Si1—C15—N2 | −179.77 (18) |
| C1—N2—C7—N1 | 0.1 (2) | C16—Si1—C15—N2 | −59.84 (19) |
| Cg3 is the centroid of the C9–C14 ring. |
| H··· | ||||
| O1—H1A···Cl1 | 0.86 | 2.45 | 3.257 (2) | 157 |
| O1—H1B···Cl1i | 0.85 | 2.45 | 3.250 (3) | 158 |
| C7—H7···O1 | 0.93 | 2.51 | 3.170 (3) | 128 |
| C8—H8A···Cl1 | 0.97 | 2.81 | 3.703 (2) | 153 |
| C3—H3···Cg3ii | 0.93 | 2.69 | 3.526 (2) | 151 |
| Centroid–centroid | plane–plane | offset | |
| Cg1···Cg2i | 3.5690 (15) | 3.430 (1) | 16.0 |
| Cg2···Cg2i | 3.7223 (14) | 3.446 (1) | 22.2 |
Hydrogen-bond geometry (Å, °)
Cg3 is the centroid of the C9–C14 ring.
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.86 | 2.45 | 3.257 (2) | 157 |
| O1—H1 | 0.85 | 2.45 | 3.250 (3) | 158 |
| C7—H7⋯O1 | 0.93 | 2.51 | 3.170 (3) | 128 |
| C8—H8 | 0.97 | 2.81 | 3.703 (2) | 153 |
| C3—H3⋯ | 0.93 | 2.69 | 3.526 (2) | 151 |
Symmetry codes: (i) ; (ii) .