Literature DB >> 21587959

3,4-Dimeth-oxy-benzaldehyde [2,8-bis-(trifluoro-meth-yl)quinolin-4-yl]hydrazone.

Waleed Fedl Ali Al-Eryani, J Shylaja Kumari, H K Arunkashi, Suresh Babu Vepuri, H C Devarajegowda.   

Abstract

In the title compound, C(20)H(15)F(6)N(3)O(2), the quinoline ring system is almost coplanar with the benzene ring; the dihedral angle between the two planes is 2.31 (8)°. The crystal structure displays an inter-molecular C-H⋯F hydrogen bond. In addition, a weak π-π inter-action is observed between the unfused benzene ring and the benzene ring of quinoline, with a centroid-centroid distance of 3.586 (1) Å.

Entities:  

Year:  2010        PMID: 21587959      PMCID: PMC3006850          DOI: 10.1107/S1600536810021616

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to quinolines, see: Mao et al. (2009 ▶); Bermudez et al.(2004 ▶); Jayaprakash et al. (2006 ▶); Andries et al. (2005 ▶). For related structures, see: Skörska et al. (2005 ▶).

Experimental

Crystal data

C20H15F6N3O2 M = 443.35 Triclinic, a = 7.0359 (6) Å b = 8.9617 (8) Å c = 15.5315 (14) Å α = 90.154 (1)° β = 93.951 (1)° γ = 96.449 (1)° V = 970.75 (15) Å3 Z = 2 Mo Kα radiation μ = 0.14 mm−1 T = 298 K 0.22 × 0.15 × 0.12 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: ψ scan (SADABS; Sheldrick, 2007 ▶) T min = 0.975, T max = 0.984 9677 measured reflections 3756 independent reflections 2951 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.060 wR(F 2) = 0.175 S = 1.03 3756 reflections 281 parameters H-atom parameters constrained Δρmax = 0.51 e Å−3 Δρmin = −0.31 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810021616/wn2391sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810021616/wn2391Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H15F6N3O2Z = 2
Mr = 443.35F(000) = 452
Triclinic, P1Dx = 1.517 Mg m3
Hall symbol: -P 1Melting point: 487 K
a = 7.0359 (6) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.9617 (8) ÅCell parameters from 3756 reflections
c = 15.5315 (14) Åθ = 2.3–25.9°
α = 90.154 (1)°µ = 0.14 mm1
β = 93.951 (1)°T = 298 K
γ = 96.449 (1)°Plate, colourless
V = 970.75 (15) Å30.22 × 0.15 × 0.12 mm
Bruker SMART CCD area-detector diffractometer3756 independent reflections
Radiation source: fine-focus sealed tube2951 reflections with I > 2σ(I)
graphiteRint = 0.023
ω and φ scansθmax = 25.9°, θmin = 2.3°
Absorption correction: ψ scan (SADABS; Sheldrick, 2007)h = −8→8
Tmin = 0.975, Tmax = 0.984k = −11→11
9677 measured reflectionsl = −19→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.060H-atom parameters constrained
wR(F2) = 0.175w = 1/[σ2(Fo2) + (0.0861P)2 + 0.4197P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3756 reflectionsΔρmax = 0.51 e Å3
281 parametersΔρmin = −0.31 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.013 (3)
Experimental. 1H NMR (300 MHz, CD3 OD): δ, 3.886 (s, 3H, OCH3), 3.930 (s, 3H, OCH3) 7.047-7.019 (d, IH, 3,4-dimethoxyphenyl, J = 8.1Hz) 7.297-7.269 (t, 1H, trifluoromethylquinoline, J = 8.4Hz), 7.46 (s, IH, trifluoromethylquinoline), 7.667-7.640 (d, 1H, 3,4-dimethoxyphenyl, J=8.1Hz), 8.138-8.114 (d, 1H, trifluoromethylquinoline, J=7.2Hz), 8.26 (s, 1H, =CH), 8.263 (s, IH, 3,4-dimethoxyphenyl), 8.527-8.498 (d, IH, trifluoromethylquinoline, J=8.7Hz), 8.52 (s, 1H, N-H).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.2412 (5)0.4438 (2)1.01640 (13)0.1566 (13)
F20.1191 (7)0.3559 (3)1.1239 (2)0.211 (2)
F30.4056 (6)0.3784 (3)1.1201 (2)0.1887 (16)
F40.1562 (3)0.5209 (2)1.39246 (11)0.0901 (5)
F50.3417 (3)0.6419 (2)1.48883 (9)0.0978 (6)
F60.4605 (3)0.5329 (2)1.38655 (10)0.0913 (6)
O10.1621 (3)1.07781 (19)0.57898 (9)0.0638 (5)
O20.1874 (3)0.83177 (18)0.65840 (10)0.0688 (5)
N10.2843 (3)0.6043 (2)1.22381 (12)0.0578 (5)
N20.2663 (3)0.98738 (19)1.07163 (10)0.0507 (5)
H20.27331.07501.09510.061*
N30.2477 (3)0.97088 (19)0.98344 (10)0.0482 (4)
C10.3304 (3)1.0213 (3)1.34583 (14)0.0580 (6)
H10.34291.11381.37420.070*
C20.3326 (3)0.8892 (3)1.39354 (14)0.0582 (6)
H2A0.34490.89431.45350.070*
C30.3169 (3)0.7533 (3)1.35271 (13)0.0525 (5)
C40.2979 (3)0.7427 (2)1.26103 (13)0.0470 (5)
C50.2936 (3)0.8770 (2)1.21338 (12)0.0436 (5)
C60.3100 (3)1.0148 (2)1.25823 (13)0.0518 (5)
H60.30691.10341.22730.062*
C70.3190 (4)0.6124 (3)1.40417 (15)0.0689 (7)
C80.2689 (4)0.6011 (2)1.13901 (14)0.0591 (6)
C90.2625 (3)0.7229 (2)1.08485 (13)0.0538 (5)
H90.25090.70991.02520.065*
C100.2736 (3)0.8634 (2)1.12140 (12)0.0444 (5)
C110.2571 (6)0.4467 (3)1.09982 (19)0.0922 (11)
C120.2377 (3)1.0891 (2)0.94007 (13)0.0506 (5)
H120.24271.18040.96920.061*
C130.2186 (3)1.0878 (2)0.84631 (12)0.0450 (5)
C140.2105 (3)0.9538 (2)0.79899 (13)0.0478 (5)
H140.21670.86360.82790.057*
C150.1934 (3)0.9543 (2)0.71040 (13)0.0492 (5)
C160.1818 (3)1.0908 (2)0.66624 (12)0.0478 (5)
C170.1917 (3)1.2227 (2)0.71299 (13)0.0521 (5)
H170.18631.31340.68450.063*
C180.2096 (3)1.2204 (2)0.80233 (13)0.0514 (5)
H180.21561.31010.83320.062*
C190.2110 (5)0.6924 (3)0.69794 (18)0.0804 (8)
H19A0.20420.61540.65440.121*
H19B0.11130.66810.73650.121*
H19C0.33350.69890.72980.121*
C200.1384 (4)1.2097 (3)0.53018 (14)0.0654 (7)
H20A0.12621.18470.46980.098*
H20B0.24801.28250.54210.098*
H20C0.02511.25060.54580.098*
U11U22U33U12U13U23
F10.342 (4)0.0590 (11)0.0692 (12)0.0322 (16)0.0014 (16)−0.0190 (9)
F20.345 (5)0.0832 (16)0.196 (3)−0.085 (2)0.128 (3)−0.0574 (17)
F30.282 (4)0.1017 (18)0.190 (3)0.103 (2)−0.062 (3)−0.0563 (18)
F40.0978 (12)0.0869 (12)0.0843 (11)0.0028 (9)0.0072 (9)0.0326 (9)
F50.1344 (16)0.1228 (15)0.0411 (8)0.0407 (12)−0.0016 (8)0.0207 (8)
F60.1058 (13)0.1033 (13)0.0741 (10)0.0536 (10)0.0027 (9)0.0238 (9)
O10.0832 (11)0.0717 (11)0.0365 (8)0.0125 (8)−0.0023 (7)0.0003 (7)
O20.1029 (13)0.0560 (9)0.0466 (9)0.0126 (9)−0.0081 (8)−0.0122 (7)
N10.0775 (13)0.0495 (10)0.0471 (10)0.0120 (9)0.0014 (9)0.0041 (8)
N20.0750 (12)0.0433 (9)0.0338 (9)0.0082 (8)0.0023 (8)−0.0030 (7)
N30.0617 (11)0.0477 (9)0.0352 (9)0.0071 (8)0.0016 (7)−0.0013 (7)
C10.0635 (14)0.0646 (14)0.0457 (12)0.0051 (11)0.0053 (10)−0.0152 (10)
C20.0559 (13)0.0826 (16)0.0356 (10)0.0082 (11)−0.0001 (9)−0.0064 (10)
C30.0480 (11)0.0712 (14)0.0388 (11)0.0114 (10)−0.0001 (8)0.0043 (10)
C40.0475 (11)0.0536 (12)0.0403 (10)0.0092 (9)−0.0003 (8)0.0019 (8)
C50.0433 (10)0.0494 (11)0.0381 (10)0.0061 (8)0.0015 (8)−0.0027 (8)
C60.0580 (12)0.0523 (12)0.0450 (11)0.0053 (9)0.0053 (9)−0.0043 (9)
C70.0754 (17)0.0861 (18)0.0475 (13)0.0230 (15)−0.0017 (11)0.0141 (12)
C80.0836 (16)0.0457 (12)0.0479 (12)0.0085 (11)0.0013 (11)−0.0017 (9)
C90.0763 (15)0.0484 (12)0.0363 (10)0.0077 (10)−0.0004 (9)−0.0035 (8)
C100.0492 (11)0.0457 (11)0.0382 (10)0.0059 (8)0.0003 (8)0.0009 (8)
C110.172 (4)0.0439 (14)0.0622 (17)0.0193 (18)0.0067 (18)0.0032 (12)
C120.0666 (13)0.0453 (11)0.0404 (11)0.0091 (9)0.0034 (9)−0.0034 (9)
C130.0497 (11)0.0479 (11)0.0376 (10)0.0065 (8)0.0027 (8)−0.0005 (8)
C140.0542 (12)0.0468 (11)0.0419 (11)0.0063 (9)−0.0002 (9)0.0019 (8)
C150.0518 (11)0.0524 (12)0.0426 (11)0.0054 (9)−0.0032 (9)−0.0067 (9)
C160.0485 (11)0.0588 (12)0.0361 (10)0.0078 (9)0.0006 (8)−0.0006 (9)
C170.0624 (13)0.0510 (12)0.0438 (11)0.0101 (10)0.0037 (9)0.0079 (9)
C180.0664 (13)0.0465 (11)0.0422 (11)0.0096 (9)0.0049 (9)−0.0031 (9)
C190.125 (3)0.0507 (14)0.0645 (16)0.0107 (14)0.0008 (15)−0.0115 (11)
C200.0732 (15)0.0844 (17)0.0398 (11)0.0141 (13)0.0027 (10)0.0113 (11)
F1—C111.293 (3)C5—C61.406 (3)
F2—C111.272 (5)C5—C101.429 (3)
F3—C111.291 (5)C6—H60.9300
F4—C71.333 (3)C8—C91.383 (3)
F5—C71.336 (3)C8—C111.502 (3)
F6—C71.330 (3)C9—C101.372 (3)
O1—C161.356 (2)C9—H90.9300
O1—C201.425 (3)C12—C131.453 (3)
O2—C151.357 (3)C12—H120.9300
O2—C191.415 (3)C13—C181.378 (3)
N1—C81.314 (3)C13—C141.399 (3)
N1—C41.358 (3)C14—C151.373 (3)
N2—C101.359 (3)C14—H140.9300
N2—N31.373 (2)C15—C161.412 (3)
N2—H20.8600C16—C171.378 (3)
N3—C121.263 (3)C17—C181.385 (3)
C1—C61.359 (3)C17—H170.9300
C1—C21.399 (3)C18—H180.9300
C1—H10.9300C19—H19A0.9600
C2—C31.362 (3)C19—H19B0.9600
C2—H2A0.9300C19—H19C0.9600
C3—C41.423 (3)C20—H20A0.9600
C3—C71.497 (3)C20—H20B0.9600
C4—C51.417 (3)C20—H20C0.9600
C16—O1—C20118.09 (18)F2—C11—F3103.2 (3)
C15—O2—C19117.76 (18)F2—C11—F1106.1 (3)
C8—N1—C4115.71 (18)F3—C11—F1104.6 (3)
C10—N2—N3119.15 (16)F2—C11—C8114.2 (3)
C10—N2—H2120.4F3—C11—C8113.4 (3)
N3—N2—H2120.4F1—C11—C8114.3 (2)
C12—N3—N2116.75 (17)N3—C12—C13122.43 (19)
C6—C1—C2120.2 (2)N3—C12—H12118.8
C6—C1—H1119.9C13—C12—H12118.8
C2—C1—H1119.9C18—C13—C14118.76 (18)
C3—C2—C1120.41 (19)C18—C13—C12119.92 (18)
C3—C2—H2A119.8C14—C13—C12121.32 (18)
C1—C2—H2A119.8C15—C14—C13120.70 (19)
C2—C3—C4120.8 (2)C15—C14—H14119.7
C2—C3—C7120.1 (2)C13—C14—H14119.7
C4—C3—C7119.0 (2)O2—C15—C14125.5 (2)
N1—C4—C5123.44 (18)O2—C15—C16114.57 (18)
N1—C4—C3118.27 (19)C14—C15—C16119.92 (19)
C5—C4—C3118.29 (19)O1—C16—C17125.84 (19)
C6—C5—C4118.94 (18)O1—C16—C15114.91 (18)
C6—C5—C10123.79 (19)C17—C16—C15119.25 (18)
C4—C5—C10117.27 (18)C16—C17—C18120.15 (19)
C1—C6—C5121.3 (2)C16—C17—H17119.9
C1—C6—H6119.3C18—C17—H17119.9
C5—C6—H6119.3C13—C18—C17121.22 (19)
F6—C7—F4107.0 (2)C13—C18—H18119.4
F6—C7—F5106.04 (19)C17—C18—H18119.4
F4—C7—F5105.7 (2)O2—C19—H19A109.5
F6—C7—C3113.2 (2)O2—C19—H19B109.5
F4—C7—C3112.9 (2)H19A—C19—H19B109.5
F5—C7—C3111.5 (2)O2—C19—H19C109.5
N1—C8—C9126.8 (2)H19A—C19—H19C109.5
N1—C8—C11114.4 (2)H19B—C19—H19C109.5
C9—C8—C11118.8 (2)O1—C20—H20A109.5
C10—C9—C8118.24 (19)O1—C20—H20B109.5
C10—C9—H9120.9H20A—C20—H20B109.5
C8—C9—H9120.9O1—C20—H20C109.5
N2—C10—C9121.02 (18)H20A—C20—H20C109.5
N2—C10—C5120.47 (18)H20B—C20—H20C109.5
C9—C10—C5118.52 (18)
C10—N2—N3—C12178.62 (19)C6—C5—C10—N2−1.1 (3)
C6—C1—C2—C30.9 (3)C4—C5—C10—N2179.28 (18)
C1—C2—C3—C40.0 (3)C6—C5—C10—C9178.8 (2)
C1—C2—C3—C7−179.9 (2)C4—C5—C10—C9−0.8 (3)
C8—N1—C4—C50.8 (3)N1—C8—C11—F257.4 (5)
C8—N1—C4—C3−179.4 (2)C9—C8—C11—F2−122.5 (4)
C2—C3—C4—N1179.5 (2)N1—C8—C11—F3−60.4 (4)
C7—C3—C4—N1−0.7 (3)C9—C8—C11—F3119.7 (3)
C2—C3—C4—C5−0.7 (3)N1—C8—C11—F1179.8 (3)
C7—C3—C4—C5179.15 (19)C9—C8—C11—F1−0.1 (5)
N1—C4—C5—C6−179.6 (2)N2—N3—C12—C13179.74 (19)
C3—C4—C5—C60.6 (3)N3—C12—C13—C18−179.6 (2)
N1—C4—C5—C100.1 (3)N3—C12—C13—C14−0.1 (3)
C3—C4—C5—C10−179.77 (18)C18—C13—C14—C15−0.2 (3)
C2—C1—C6—C5−0.9 (3)C12—C13—C14—C15−179.7 (2)
C4—C5—C6—C10.2 (3)C19—O2—C15—C14−3.6 (4)
C10—C5—C6—C1−179.4 (2)C19—O2—C15—C16175.9 (2)
C2—C3—C7—F6−120.9 (2)C13—C14—C15—O2178.9 (2)
C4—C3—C7—F659.2 (3)C13—C14—C15—C16−0.6 (3)
C2—C3—C7—F4117.4 (3)C20—O1—C16—C17−3.8 (3)
C4—C3—C7—F4−62.4 (3)C20—O1—C16—C15176.45 (19)
C2—C3—C7—F5−1.5 (3)O2—C15—C16—O11.5 (3)
C4—C3—C7—F5178.7 (2)C14—C15—C16—O1−178.97 (19)
C4—N1—C8—C9−1.0 (4)O2—C15—C16—C17−178.3 (2)
C4—N1—C8—C11179.1 (3)C14—C15—C16—C171.2 (3)
N1—C8—C9—C100.2 (4)O1—C16—C17—C18179.2 (2)
C11—C8—C9—C10−179.9 (3)C15—C16—C17—C18−1.0 (3)
N3—N2—C10—C9−0.1 (3)C14—C13—C18—C170.4 (3)
N3—N2—C10—C5179.80 (17)C12—C13—C18—C17179.9 (2)
C8—C9—C10—N2−179.4 (2)C16—C17—C18—C130.2 (3)
C8—C9—C10—C50.8 (3)
D—H···AD—HH···AD···AD—H···A
C12—H12···F1i0.932.473.387 (3)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12⋯F1i0.932.473.387 (3)168

Symmetry code: (i) .

  6 in total

1.  A diarylquinoline drug active on the ATP synthase of Mycobacterium tuberculosis.

Authors:  Koen Andries; Peter Verhasselt; Jerome Guillemont; Hinrich W H Göhlmann; Jean-Marc Neefs; Hans Winkler; Jef Van Gestel; Philip Timmerman; Min Zhu; Ennis Lee; Peter Williams; Didier de Chaffoy; Emma Huitric; Sven Hoffner; Emmanuelle Cambau; Chantal Truffot-Pernot; Nacer Lounis; Vincent Jarlier
Journal:  Science       Date:  2004-12-09       Impact factor: 47.728

2.  Design, synthesis, and SAR studies of mefloquine-based ligands as potential antituberculosis agents.

Authors:  Sarva Jayaprakash; Yasuyoshi Iso; Baojie Wan; Scott G Franzblau; Alan P Kozikowski
Journal:  ChemMedChem       Date:  2006-06       Impact factor: 3.466

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Conformation stability and organization of mefloquine molecules in different environments.

Authors:  Agnieszka Skórska; Jan Sliwiński; Barbara J Oleksyn
Journal:  Bioorg Med Chem Lett       Date:  2005-11-21       Impact factor: 2.823

5.  SRI-286, a thiosemicarbazole, in combination with mefloquine and moxifloxacin for treatment of murine Mycobacterium avium complex disease.

Authors:  Luiz E Bermudez; Peter Kolonoski; Lianne E Seitz; Mary Petrofsky; Robert Reynolds; Martin Wu; Lowell S Young
Journal:  Antimicrob Agents Chemother       Date:  2004-09       Impact factor: 5.191

6.  From serendipity to rational antituberculosis drug discovery of mefloquine-isoxazole carboxylic acid esters.

Authors:  Jialin Mao; Hai Yuan; Yuehong Wang; Baojie Wan; Marco Pieroni; Qingqing Huang; Richard B van Breemen; Alan P Kozikowski; Scott G Franzblau
Journal:  J Med Chem       Date:  2009-11-26       Impact factor: 7.446

  6 in total
  2 in total

1.  1-{1-[2,8-Bis(trifluoro-meth-yl)-4-quin-olyl]-5-methyl-1H-1,2,3-triazol-4-yl}ethanone.

Authors:  H C Devarajegowda; S Jeyaseelan; V Sumangala; Suresh P Nayak
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-08

2.  Nicotinaldehyde [2,8-bis-(trifluoro-meth-yl)quinolin-4-yl]hydrazone monohydrate.

Authors:  H C Devarajegowda; Suresh Babu Vepuri; M Vinduvahini; H D Kavitha; H K Arunkashi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-11
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.