Literature DB >> 21587826

(E)-1-Diphenyl-methyl-idene-2-[(1H-indol-3-yl)methyl-idene]hydrazine.

R Archana, R Anbazhagan, K R Sankaran, A Thiruvalluvar, R J Butcher.   

Abstract

In the title compound, C(22)H(17)N(3), the 1H-indole unit is essentially planar, with a dihedral angle of 0.95 (10)° between the pyrrole ring and the fused benzene ring. The dihedral angle between the two phenyl rings is 65.09 (10)°. In the crystal, an inter-molecular N-H⋯N hydrogen bond forms an infinite chain in the b-axis direction.

Entities:  

Year:  2010        PMID: 21587826      PMCID: PMC3006827          DOI: 10.1107/S1600536810020702

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Fleming & Harley-Mason (1961 ▶). For the crystal structures of some aromatic azines, for example, acetophenone azine, see: Glaser et al. (1995 ▶). For other heterocyclic aldehyde azines, see: Lin et al. (2001 ▶). For the crystal structure of symmetrical 1H-Indole-3-carbaldehyde azine, see: Rizal et al. (2008 ▶).

Experimental

Crystal data

C22H17N3 M = 323.39 Orthorhombic, a = 24.1594 (3) Å b = 13.8501 (2) Å c = 5.2173 (1) Å V = 1745.76 (5) Å3 Z = 4 Cu Kα radiation μ = 0.58 mm−1 T = 295 K 0.46 × 0.21 × 0.18 mm

Data collection

Oxford Diffraction Xcalibur Ruby Gemini diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.796, T max = 1.000 8042 measured reflections 2059 independent reflections 1954 reflections with I > 2σ(I) R int = 0.015

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.092 S = 1.06 2059 reflections 230 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.12 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810020702/nk2037sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810020702/nk2037Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H17N3Dx = 1.230 Mg m3
Mr = 323.39Melting point: 423 K
Orthorhombic, Pna21Cu Kα radiation, λ = 1.54184 Å
Hall symbol: P 2c -2nCell parameters from 6053 reflections
a = 24.1594 (3) Åθ = 4.9–77.4°
b = 13.8501 (2) ŵ = 0.57 mm1
c = 5.2173 (1) ÅT = 295 K
V = 1745.76 (5) Å3Needle, pale yellow
Z = 40.46 × 0.21 × 0.18 mm
F(000) = 680
Oxford Diffraction Xcalibur Ruby Gemini diffractometer2059 independent reflections
Radiation source: Enhance (Cu) X-ray Source1954 reflections with I > 2σ(I)
graphiteRint = 0.015
Detector resolution: 10.5081 pixels mm-1θmax = 77.6°, θmin = 4.9°
ω scansh = −30→27
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −17→17
Tmin = 0.796, Tmax = 1.000l = −5→6
8042 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.092H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0712P)2 + 0.0189P] where P = (Fo2 + 2Fc2)/3
2059 reflections(Δ/σ)max = 0.001
230 parametersΔρmax = 0.12 e Å3
1 restraintΔρmin = −0.17 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.25795 (6)0.62655 (10)0.3007 (4)0.0689 (4)
N20.15647 (5)0.26575 (8)0.6043 (3)0.0551 (3)
N30.16478 (5)0.36551 (8)0.6361 (3)0.0550 (4)
C10.20416 (6)0.39405 (10)0.4934 (4)0.0582 (4)
C20.25644 (7)0.52898 (11)0.2923 (4)0.0692 (5)
C30.21904 (6)0.49427 (10)0.4681 (4)0.0578 (4)
C40.15783 (6)0.59044 (12)0.7935 (4)0.0636 (5)
C50.14574 (8)0.68387 (14)0.8692 (5)0.0778 (6)
C60.17085 (8)0.76319 (13)0.7519 (5)0.0794 (7)
C70.20847 (8)0.75255 (11)0.5582 (5)0.0711 (6)
C80.22152 (6)0.65856 (11)0.4834 (4)0.0587 (4)
C90.19622 (5)0.57731 (10)0.5974 (3)0.0540 (4)
C100.11010 (6)0.23275 (9)0.6904 (3)0.0510 (3)
C110.09878 (6)0.12935 (10)0.6271 (3)0.0576 (4)
C120.12405 (8)0.08728 (13)0.4155 (4)0.0715 (6)
C130.11502 (10)−0.00994 (14)0.3603 (5)0.0890 (8)
C140.08040 (10)−0.06415 (13)0.5133 (6)0.0945 (9)
C150.05508 (10)−0.02335 (13)0.7208 (6)0.0891 (8)
C160.06379 (8)0.07414 (11)0.7795 (5)0.0710 (5)
C210.06955 (6)0.28877 (10)0.8444 (3)0.0513 (4)
C220.01336 (6)0.28961 (11)0.7848 (4)0.0609 (4)
C23−0.02317 (7)0.34404 (14)0.9306 (5)0.0728 (6)
C24−0.00457 (8)0.39643 (14)1.1386 (4)0.0735 (6)
C250.05106 (8)0.39457 (13)1.2010 (4)0.0686 (5)
C260.08756 (6)0.34155 (11)1.0559 (3)0.0593 (4)
H10.2797 (10)0.6616 (17)0.204 (6)0.089 (7)*
H1A0.224190.348320.401600.0698*
H20.277650.490870.183220.0830*
H40.140800.537870.871520.0764*
H50.120390.694011.000590.0933*
H60.161730.825020.807200.0953*
H70.224680.805750.479480.0853*
H120.146990.124000.310710.0858*
H130.13237−0.038260.220010.1067*
H140.07425−0.128850.475040.1133*
H150.03194−0.060490.823600.1069*
H160.046220.101850.920010.0852*
H220.000290.253610.647070.0731*
H23−0.060540.345250.887810.0873*
H24−0.029240.432661.235950.0882*
H250.063820.429301.341650.0823*
H260.124880.340911.099550.0711*
U11U22U33U12U13U23
N10.0668 (7)0.0567 (7)0.0833 (9)−0.0144 (6)0.0116 (8)0.0021 (8)
N20.0562 (6)0.0416 (5)0.0675 (7)0.0010 (4)−0.0022 (6)0.0012 (6)
N30.0535 (5)0.0425 (5)0.0689 (8)−0.0018 (4)0.0006 (5)0.0014 (6)
C10.0501 (6)0.0493 (6)0.0751 (10)0.0016 (5)0.0050 (7)−0.0012 (7)
C20.0642 (8)0.0578 (8)0.0856 (11)−0.0070 (6)0.0161 (9)−0.0013 (9)
C30.0483 (6)0.0514 (7)0.0737 (9)−0.0034 (5)0.0032 (7)0.0006 (7)
C40.0556 (7)0.0622 (8)0.0731 (10)−0.0023 (6)0.0038 (8)−0.0011 (8)
C50.0673 (9)0.0766 (10)0.0894 (14)0.0047 (8)0.0079 (9)−0.0178 (10)
C60.0784 (10)0.0573 (8)0.1025 (16)0.0033 (7)−0.0065 (11)−0.0201 (10)
C70.0747 (9)0.0509 (7)0.0877 (12)−0.0090 (7)−0.0107 (10)−0.0036 (8)
C80.0535 (6)0.0529 (7)0.0697 (9)−0.0084 (5)−0.0072 (7)0.0002 (7)
C90.0445 (6)0.0507 (6)0.0668 (9)−0.0037 (5)−0.0064 (6)−0.0003 (7)
C100.0535 (6)0.0432 (5)0.0562 (7)−0.0007 (5)−0.0090 (6)0.0058 (6)
C110.0620 (7)0.0449 (6)0.0660 (8)−0.0027 (5)−0.0177 (7)0.0019 (7)
C120.0800 (10)0.0593 (8)0.0752 (11)0.0023 (7)−0.0156 (9)−0.0079 (8)
C130.1040 (14)0.0647 (10)0.0982 (16)0.0089 (9)−0.0288 (13)−0.0240 (11)
C140.1079 (15)0.0465 (8)0.129 (2)−0.0049 (9)−0.0440 (16)−0.0108 (11)
C150.1001 (14)0.0516 (9)0.1155 (19)−0.0200 (9)−0.0224 (13)0.0108 (11)
C160.0786 (10)0.0512 (7)0.0833 (11)−0.0120 (7)−0.0120 (10)0.0077 (8)
C210.0551 (7)0.0453 (6)0.0535 (7)−0.0041 (5)−0.0037 (6)0.0089 (5)
C220.0557 (7)0.0612 (7)0.0658 (8)−0.0039 (6)−0.0070 (7)0.0032 (8)
C230.0559 (7)0.0787 (10)0.0837 (12)0.0040 (7)−0.0001 (9)0.0088 (10)
C240.0738 (10)0.0731 (9)0.0737 (11)0.0080 (8)0.0134 (9)0.0029 (9)
C250.0808 (10)0.0693 (9)0.0557 (8)−0.0044 (8)0.0030 (8)−0.0016 (8)
C260.0596 (7)0.0627 (8)0.0556 (7)−0.0049 (6)−0.0055 (6)0.0036 (7)
N1—C21.353 (2)C21—C261.393 (2)
N1—C81.371 (3)C21—C221.393 (2)
N2—N31.4060 (16)C22—C231.388 (3)
N2—C101.2906 (19)C23—C241.381 (3)
N3—C11.271 (2)C24—C251.383 (3)
N1—H10.88 (3)C25—C261.375 (2)
C1—C31.440 (2)C1—H1A0.9300
C2—C31.374 (3)C2—H20.9300
C3—C91.443 (2)C4—H40.9300
C4—C51.384 (3)C5—H50.9300
C4—C91.393 (2)C6—H60.9300
C5—C61.396 (3)C7—H70.9300
C6—C71.367 (3)C12—H120.9300
C7—C81.395 (2)C13—H130.9300
C8—C91.412 (2)C14—H140.9300
C10—C211.486 (2)C15—H150.9300
C10—C111.4949 (19)C16—H160.9300
C11—C121.390 (3)C22—H220.9300
C11—C161.390 (3)C23—H230.9300
C12—C131.394 (3)C24—H240.9300
C13—C141.379 (3)C25—H250.9300
C14—C151.366 (4)C26—H260.9300
C15—C161.400 (2)
N1···N2i3.0069 (19)C12···H2ii3.0600
N2···N1ii3.0069 (19)C13···H2ii3.0900
N3···C43.226 (2)C14···H6v2.9300
N3···C262.896 (2)C16···H223.0000
N2···H26iii2.9300C21···H162.6800
N2···H1ii2.18 (2)C22···H162.8100
N2···H262.8900H1···N2i2.18 (2)
N2···H122.5000H1···C10i2.84 (2)
N3···H42.7500H1···C11i3.00 (2)
N3···H262.6300H1···C12i2.96 (3)
C2···C12i3.585 (3)H1A···C6viii2.9000
C4···N33.226 (2)H1A···C7viii2.7600
C6···C14iv3.470 (3)H1A···H7viii2.5900
C12···C2ii3.585 (3)H2···C12i3.0600
C13···C16iii3.474 (4)H2···C13i3.0900
C14···C6v3.470 (3)H4···N32.7500
C16···C223.224 (2)H5···H23ix2.5400
C16···C13vi3.474 (4)H6···C14iv2.9300
C22···C25iii3.496 (3)H7···H1Avii2.5900
C22···C163.224 (2)H12···N22.5000
C25···C22vi3.496 (3)H16···C212.6800
C26···N32.896 (2)H16···C222.8100
C1···H26iii2.9000H22···C112.9400
C6···H1Avii2.9000H22···C163.0000
C7···H1Avii2.7600H23···H5x2.5400
C10···H1ii2.84 (2)H26···N22.8900
C11···H222.9400H26···N2vi2.9300
C11···H1ii3.00 (2)H26···N32.6300
C12···H1ii2.96 (3)H26···C1vi2.9000
C2—N1—C8109.17 (15)C23—C24—C25119.44 (18)
N3—N2—C10115.52 (12)C24—C25—C26120.24 (18)
N2—N3—C1110.08 (13)C21—C26—C25121.07 (15)
C2—N1—H1123.5 (16)N3—C1—H1A119.00
C8—N1—H1127.4 (17)C3—C1—H1A119.00
N3—C1—C3122.71 (15)N1—C2—H2125.00
N1—C2—C3110.22 (16)C3—C2—H2125.00
C1—C3—C2124.23 (16)C5—C4—H4121.00
C2—C3—C9106.52 (13)C9—C4—H4121.00
C1—C3—C9129.06 (15)C4—C5—H5119.00
C5—C4—C9118.18 (16)C6—C5—H5119.00
C4—C5—C6121.3 (2)C5—C6—H6119.00
C5—C6—C7121.87 (18)C7—C6—H6119.00
C6—C7—C8117.23 (17)C6—C7—H7121.00
C7—C8—C9121.87 (17)C8—C7—H7121.00
N1—C8—C7129.89 (17)C11—C12—H12120.00
N1—C8—C9108.24 (13)C13—C12—H12120.00
C4—C9—C8119.58 (14)C12—C13—H13120.00
C3—C9—C4134.58 (14)C14—C13—H13120.00
C3—C9—C8105.84 (13)C13—C14—H14120.00
N2—C10—C11114.91 (13)C15—C14—H14120.00
N2—C10—C21125.15 (12)C14—C15—H15120.00
C11—C10—C21119.94 (12)C16—C15—H15120.00
C10—C11—C12119.79 (14)C11—C16—H16120.00
C12—C11—C16119.41 (15)C15—C16—H16120.00
C10—C11—C16120.80 (15)C21—C22—H22120.00
C11—C12—C13120.02 (18)C23—C22—H22120.00
C12—C13—C14120.1 (2)C22—C23—H23120.00
C13—C14—C15120.36 (19)C24—C23—H23120.00
C14—C15—C16120.3 (2)C23—C24—H24120.00
C11—C16—C15119.8 (2)C25—C24—H24120.00
C10—C21—C22121.76 (14)C24—C25—H25120.00
C22—C21—C26118.48 (14)C26—C25—H25120.00
C10—C21—C26119.76 (13)C21—C26—H26119.00
C21—C22—C23120.14 (17)C25—C26—H26119.00
C22—C23—C24120.62 (17)
C8—N1—C2—C30.1 (2)C7—C8—C9—C4−1.2 (3)
C2—N1—C8—C7−179.2 (2)N2—C10—C11—C12−24.1 (2)
C2—N1—C8—C90.6 (2)N2—C10—C11—C16155.04 (17)
C10—N2—N3—C1−164.25 (15)C21—C10—C11—C12156.63 (16)
N3—N2—C10—C11172.86 (13)C21—C10—C11—C16−24.3 (2)
N3—N2—C10—C21−7.9 (2)N2—C10—C21—C22131.69 (18)
N2—N3—C1—C3174.46 (16)N2—C10—C21—C26−48.9 (2)
N3—C1—C3—C2−171.37 (18)C11—C10—C21—C22−49.1 (2)
N3—C1—C3—C93.0 (3)C11—C10—C21—C26130.34 (15)
N1—C2—C3—C1174.67 (17)C10—C11—C12—C13177.96 (18)
N1—C2—C3—C9−0.8 (2)C16—C11—C12—C13−1.2 (3)
C1—C3—C9—C46.0 (3)C10—C11—C16—C15−178.12 (19)
C1—C3—C9—C8−174.06 (18)C12—C11—C16—C151.0 (3)
C2—C3—C9—C4−178.90 (18)C11—C12—C13—C140.9 (3)
C2—C3—C9—C81.10 (19)C12—C13—C14—C15−0.5 (4)
C9—C4—C5—C60.5 (3)C13—C14—C15—C160.4 (4)
C5—C4—C9—C3−179.81 (19)C14—C15—C16—C11−0.6 (4)
C5—C4—C9—C80.2 (2)C10—C21—C22—C23−178.96 (16)
C4—C5—C6—C7−0.2 (4)C26—C21—C22—C231.6 (2)
C5—C6—C7—C8−0.8 (3)C10—C21—C26—C25179.57 (15)
C6—C7—C8—N1−178.7 (2)C22—C21—C26—C25−1.0 (2)
C6—C7—C8—C91.5 (3)C21—C22—C23—C24−1.2 (3)
N1—C8—C9—C3−1.04 (19)C22—C23—C24—C250.2 (3)
N1—C8—C9—C4178.96 (15)C23—C24—C25—C260.5 (3)
C7—C8—C9—C3178.80 (18)C24—C25—C26—C21−0.1 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···N2i0.88 (3)2.18 (2)3.0069 (19)159 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯N2i0.88 (3)2.18 (2)3.0069 (19)159 (3)

Symmetry code: (i) .

  3 in total

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1H-Indole-3-carbaldehyde azine.

Authors:  Mohd Razali Rizal; Hapipah M Ali; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-02-06

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total
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1.  Thio-phene-2-carbaldehyde azine.

Authors:  David K Geiger; H Cristina Geiger; Laura M Szczesniak
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