Literature DB >> 21587731

[(1S,2S)-2-(1-{[2-(2-Oxidobenzyl-idene-amino)-cyclo-hex-yl]imino}-eth-yl)phenolato-κO,N,N',O']copper(II).

Nura Suleiman Gwaram1, Hamid Khaledi, Hapipah Mohd Ali.   

Abstract

In the title compound, [Cu(C(21)H(22)N(2)O(2))], the cyclo-hexyl ring adopts a chair conformation with the two imine groups linked at equatorial positions. The Cu(II) ion is coordinated by two N atoms and two O atoms from the bis-Schiff base ligand in a slightly distorted square-planar geometry. The dihedral angle between the two benzene rings is 45.89 (9)°. The crystal structure is devoid of any classical hydrogen bonds. However, inter-molecular C-H⋯O inter-actions are present and stabilize the structure.

Entities:  

Year:  2010        PMID: 21587731      PMCID: PMC3007062          DOI: 10.1107/S1600536810022889

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of a similar symmetrical compound see: Yao et al. (1997 ▶). For metal complexes of unsymmetrical bis-Schiff bases, see: Lashanizadegan & Boghaei (2002 ▶); Rabie et al. (2008 ▶).

Experimental

Crystal data

[Cu(C21H22N2O2)] M = 397.95 Monoclinic, a = 9.6699 (3) Å b = 7.7324 (2) Å c = 12.1847 (4) Å β = 111.649 (2)° V = 846.80 (4) Å3 Z = 2 Mo Kα radiation μ = 1.31 mm−1 T = 100 K 0.20 × 0.10 × 0.03 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.780, T max = 0.962 9232 measured reflections 4573 independent reflections 3542 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.091 S = 0.97 4573 reflections 236 parameters 1 restraint H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.37 e Å−3 Absolute structure: Flack (1983 ▶), 2036 Friedel pairs Flack parameter: 0.050 (15) Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810022889/pv2290sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810022889/pv2290Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C21H22N2O2)]F(000) = 414
Mr = 397.95Dx = 1.561 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 1422 reflections
a = 9.6699 (3) Åθ = 3.2–23.5°
b = 7.7324 (2) ŵ = 1.31 mm1
c = 12.1847 (4) ÅT = 100 K
β = 111.649 (2)°Block, green
V = 846.80 (4) Å30.20 × 0.10 × 0.03 mm
Z = 2
Bruker APEXII CCD diffractometer4573 independent reflections
Radiation source: fine-focus sealed tube3542 reflections with I > 2σ(I)
graphiteRint = 0.053
φ and ω scansθmax = 29.6°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→13
Tmin = 0.780, Tmax = 0.962k = −10→10
9232 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048H-atom parameters constrained
wR(F2) = 0.091w = 1/[σ2(Fo2) + (0.0281P)2] where P = (Fo2 + 2Fc2)/3
S = 0.97(Δ/σ)max < 0.001
4573 reflectionsΔρmax = 0.39 e Å3
236 parametersΔρmin = −0.37 e Å3
1 restraintAbsolute structure: Flack (1983), 2036 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.050 (15)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.09681 (4)0.25280 (6)0.05446 (3)0.01389 (10)
O10.1603 (3)0.2029 (3)−0.0696 (2)0.0199 (7)
O20.2941 (3)0.3130 (3)0.1540 (2)0.0179 (6)
N1−0.1155 (3)0.2570 (8)−0.0484 (2)0.0158 (5)
N20.0262 (3)0.2546 (7)0.1826 (2)0.0148 (5)
C10.0826 (4)0.2231 (4)−0.1822 (3)0.0146 (8)
C20.1533 (4)0.1917 (5)−0.2626 (4)0.0210 (9)
H20.25280.1501−0.23300.025*
C30.0850 (4)0.2184 (5)−0.3815 (3)0.0239 (10)
H30.13550.1914−0.43310.029*
C4−0.0588 (4)0.2855 (5)−0.4267 (3)0.0250 (11)
H4−0.10560.3099−0.50850.030*
C5−0.1319 (4)0.3158 (5)−0.3509 (3)0.0206 (8)
H5−0.23060.3595−0.38250.025*
C6−0.0671 (4)0.2850 (4)−0.2290 (3)0.0142 (9)
C7−0.1594 (4)0.3112 (4)−0.1567 (3)0.0143 (7)
C8−0.3037 (4)0.4067 (5)−0.2152 (4)0.0250 (10)
H8A−0.37880.3272−0.26640.038*
H8B−0.28860.5021−0.26250.038*
H8C−0.33780.4531−0.15460.038*
C9−0.2129 (3)0.2699 (6)0.0225 (3)0.0135 (7)
H9−0.22980.39430.03630.016*
C10−0.3627 (4)0.1763 (5)−0.0305 (3)0.0185 (8)
H10A−0.42220.2286−0.10780.022*
H10B−0.34570.0531−0.04380.022*
C11−0.4481 (4)0.1894 (5)0.0520 (3)0.0198 (8)
H11A−0.46790.31250.06310.024*
H11B−0.54500.12960.01620.024*
C12−0.3605 (4)0.1086 (5)0.1712 (4)0.0223 (9)
H12A−0.3504−0.01720.16110.027*
H12B−0.41560.12500.22470.027*
C13−0.2067 (4)0.1891 (5)0.2264 (3)0.0189 (8)
H13A−0.14870.12610.29980.023*
H13B−0.21630.31100.24740.023*
C14−0.1252 (4)0.1816 (5)0.1409 (3)0.0164 (8)
H14−0.11620.05660.12340.020*
C150.0955 (4)0.3110 (4)0.2870 (3)0.0174 (8)
H150.04410.30940.34010.021*
C160.2456 (4)0.3770 (4)0.3309 (3)0.0155 (8)
C170.3008 (4)0.4505 (5)0.4447 (3)0.0206 (9)
H170.24030.44920.49080.025*
C180.4390 (4)0.5235 (5)0.4905 (4)0.0221 (9)
H180.47360.57390.56700.026*
C190.5288 (4)0.5227 (5)0.4230 (4)0.0222 (9)
H190.62500.57340.45390.027*
C200.4793 (4)0.4495 (5)0.3123 (3)0.0187 (8)
H200.54370.44740.26940.022*
C210.3353 (4)0.3770 (5)0.2605 (3)0.0174 (8)
U11U22U33U12U13U23
Cu10.01095 (17)0.01506 (18)0.0154 (2)0.0002 (3)0.00449 (14)0.0004 (3)
O10.0160 (13)0.0234 (17)0.0211 (15)0.0011 (10)0.0077 (12)−0.0015 (10)
O20.0134 (12)0.0244 (14)0.0159 (14)−0.0023 (11)0.0054 (11)−0.0004 (10)
N10.0127 (13)0.0195 (13)0.0160 (13)0.000 (2)0.0061 (11)−0.002 (2)
N20.0099 (12)0.0176 (12)0.0156 (13)0.002 (2)0.0033 (10)0.000 (2)
C10.0217 (17)0.004 (2)0.0186 (18)−0.0023 (14)0.0084 (15)−0.0016 (13)
C20.0205 (19)0.0154 (18)0.030 (2)0.0004 (15)0.0132 (18)−0.0034 (16)
C30.033 (2)0.020 (3)0.025 (2)−0.0004 (17)0.0173 (18)−0.0067 (16)
C40.033 (2)0.024 (3)0.0184 (19)−0.0016 (18)0.0100 (17)−0.0004 (16)
C50.0200 (19)0.0220 (18)0.019 (2)−0.0013 (16)0.0060 (16)0.0010 (15)
C60.0173 (17)0.007 (2)0.0190 (18)−0.0004 (14)0.0078 (14)−0.0013 (13)
C70.0124 (17)0.0111 (16)0.0185 (19)−0.0032 (13)0.0045 (15)−0.0039 (14)
C80.019 (2)0.028 (2)0.024 (2)−0.0011 (18)0.0031 (18)−0.0012 (17)
C90.0119 (14)0.0145 (19)0.0157 (16)0.0038 (18)0.0071 (12)0.0025 (18)
C100.0129 (18)0.0211 (19)0.021 (2)−0.0027 (16)0.0060 (16)−0.0062 (16)
C110.0145 (18)0.0249 (19)0.021 (2)−0.0025 (15)0.0072 (17)−0.0032 (15)
C120.017 (2)0.021 (2)0.032 (3)−0.0038 (17)0.0125 (19)0.0007 (17)
C130.0188 (19)0.0209 (18)0.019 (2)0.0016 (15)0.0094 (16)0.0028 (15)
C140.0138 (18)0.0137 (17)0.022 (2)0.0013 (15)0.0071 (16)0.0000 (15)
C150.0136 (18)0.0157 (18)0.023 (2)0.0034 (14)0.0070 (16)0.0025 (15)
C160.0151 (19)0.0120 (17)0.016 (2)−0.0011 (15)0.0023 (15)0.0047 (14)
C170.019 (2)0.0207 (19)0.018 (2)0.0039 (16)0.0023 (17)0.0016 (16)
C180.021 (2)0.021 (2)0.019 (2)−0.0014 (17)0.0010 (17)−0.0038 (17)
C190.013 (2)0.017 (2)0.028 (2)−0.0020 (16)−0.0015 (17)0.0030 (17)
C200.0131 (19)0.0179 (19)0.024 (2)0.0001 (15)0.0049 (17)0.0045 (16)
C210.0160 (19)0.0141 (18)0.020 (2)−0.0014 (15)0.0049 (16)0.0050 (15)
Cu1—O11.870 (2)C9—H91.0000
Cu1—O21.903 (2)C10—C111.522 (5)
Cu1—N21.921 (2)C10—H10A0.9900
Cu1—N11.972 (3)C10—H10B0.9900
O1—C11.307 (4)C11—C121.519 (5)
O2—C211.306 (4)C11—H11A0.9900
N1—C71.298 (5)C11—H11B0.9900
N1—C91.498 (4)C12—C131.521 (5)
N2—C151.277 (4)C12—H12A0.9900
N2—C141.474 (4)C12—H12B0.9900
C1—C21.407 (5)C13—C141.522 (5)
C1—C61.429 (5)C13—H13A0.9900
C2—C31.368 (5)C13—H13B0.9900
C2—H20.9500C14—H141.0000
C3—C41.394 (5)C15—C161.443 (5)
C3—H30.9500C15—H150.9500
C4—C51.374 (5)C16—C171.409 (5)
C4—H40.9500C16—C211.427 (5)
C5—C61.403 (5)C17—C181.366 (5)
C5—H50.9500C17—H170.9500
C6—C71.481 (5)C18—C191.400 (6)
C7—C81.506 (5)C18—H180.9500
C8—H8A0.9800C19—C201.376 (5)
C8—H8B0.9800C19—H190.9500
C8—H8C0.9800C20—C211.415 (5)
C9—C101.533 (5)C20—H200.9500
C9—C141.538 (5)
O1—Cu1—O290.86 (11)C9—C10—H10A109.6
O1—Cu1—N2168.46 (17)C11—C10—H10B109.6
O2—Cu1—N293.06 (11)C9—C10—H10B109.6
O1—Cu1—N193.73 (11)H10A—C10—H10B108.1
O2—Cu1—N1164.81 (18)C12—C11—C10111.0 (3)
N2—Cu1—N185.27 (10)C12—C11—H11A109.4
C1—O1—Cu1126.2 (2)C10—C11—H11A109.4
C21—O2—Cu1126.4 (2)C12—C11—H11B109.4
C7—N1—C9121.7 (3)C10—C11—H11B109.4
C7—N1—Cu1121.6 (2)H11A—C11—H11B108.0
C9—N1—Cu1111.31 (19)C11—C12—C13111.4 (3)
C15—N2—C14124.3 (3)C11—C12—H12A109.4
C15—N2—Cu1126.9 (3)C13—C12—H12A109.4
C14—N2—Cu1108.9 (2)C11—C12—H12B109.4
O1—C1—C2118.1 (3)C13—C12—H12B109.4
O1—C1—C6124.3 (3)H12A—C12—H12B108.0
C2—C1—C6117.4 (3)C12—C13—C14110.5 (3)
C3—C2—C1122.9 (4)C12—C13—H13A109.6
C3—C2—H2118.6C14—C13—H13A109.6
C1—C2—H2118.6C12—C13—H13B109.6
C2—C3—C4119.7 (3)C14—C13—H13B109.6
C2—C3—H3120.1H13A—C13—H13B108.1
C4—C3—H3120.1N2—C14—C13116.7 (3)
C5—C4—C3118.9 (4)N2—C14—C9106.7 (3)
C5—C4—H4120.5C13—C14—C9112.3 (3)
C3—C4—H4120.5N2—C14—H14106.9
C4—C5—C6122.9 (4)C13—C14—H14106.9
C4—C5—H5118.5C9—C14—H14106.9
C6—C5—H5118.5N2—C15—C16125.2 (3)
C5—C6—C1118.0 (3)N2—C15—H15117.4
C5—C6—C7118.4 (3)C16—C15—H15117.4
C1—C6—C7123.5 (3)C17—C16—C21119.9 (3)
N1—C7—C6121.2 (3)C17—C16—C15118.1 (4)
N1—C7—C8122.5 (3)C21—C16—C15122.0 (3)
C6—C7—C8116.3 (3)C18—C17—C16121.9 (4)
C7—C8—H8A109.5C18—C17—H17119.1
C7—C8—H8B109.5C16—C17—H17119.1
H8A—C8—H8B109.5C17—C18—C19118.9 (4)
C7—C8—H8C109.5C17—C18—H18120.6
H8A—C8—H8C109.5C19—C18—H18120.6
H8B—C8—H8C109.5C20—C19—C18120.7 (4)
N1—C9—C10115.0 (3)C20—C19—H19119.6
N1—C9—C14105.4 (3)C18—C19—H19119.6
C10—C9—C14107.1 (3)C19—C20—C21122.0 (4)
N1—C9—H9109.7C19—C20—H20119.0
C10—C9—H9109.7C21—C20—H20119.0
C14—C9—H9109.7O2—C21—C20118.9 (4)
C11—C10—C9110.4 (3)O2—C21—C16124.5 (3)
C11—C10—H10A109.6C20—C21—C16116.6 (3)
D—H···AD—HH···AD···AD—H···A
C9—H9···O1i1.002.473.403 (6)155
C10—H10B···O2ii0.992.453.366 (4)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9⋯O1i1.002.473.403 (6)155
C10—H10B⋯O2ii0.992.453.366 (4)154

Symmetry codes: (i) ; (ii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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