| Literature DB >> 21588849 |
Abstract
The Cu(II) atom in the title complex, [Cu(C(19)H(17)N(5)O(5))], is coordinated by two N atoms and two O atoms of one 2,2'-dihy-droxy-N(2),N(2)'-(3-hy-droxy-imino-pentane-2,4-di-yl)dibenzo-hydrazidate ligand, exhibiting a distorted square-planar geometry. The dihedral angle between the two benzene rings in the oxime hydrazone is 7.62 (15)°. The molecular configuration is stabilized by intramolecular O-H⋯N hydrogen bonds. Pairs of centrosymmetrically related molecules are linked into dimers by two inter-molecular C-H⋯O hydrogen bonds. Each dimer is further connected to four neighboring dimers via four O-H⋯O hydrogen bonds, forming an extended two-dimensional structure. The oxime O atom is disordered over two orientations in a 2:1 ratio.Entities:
Year: 2010 PMID: 21588849 PMCID: PMC3008999 DOI: 10.1107/S1600536810040754
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C19H17N5O5)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 4577 reflections |
| θ = 2.1–27.5° | |
| µ = 1.17 mm−1 | |
| β = 91.437 (2)° | Prism, blue |
| 0.52 × 0.22 × 0.15 mm | |
| Rigaku Weissenberg IP diffractometer | 4436 independent reflections |
| Radiation source: fine-focus sealed tube | 3065 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 17167 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4436 reflections | (Δ/σ)max = 0.002 |
| 282 parameters | Δρmax = 0.39 e Å−3 |
| 0 restraints | Δρmin = −0.40 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| Cu1 | 0.24832 (3) | 0.508624 (12) | 0.47601 (2) | 0.03770 (9) | |
| N1 | 0.46486 (19) | 0.53298 (9) | 0.64875 (15) | 0.0428 (4) | |
| N2 | 0.36561 (18) | 0.48024 (9) | 0.61023 (14) | 0.0380 (4) | |
| N3 | 0.2905 (3) | 0.30306 (12) | 0.6725 (2) | 0.0735 (7) | |
| N4 | 0.13118 (18) | 0.42316 (8) | 0.47217 (14) | 0.0364 (4) | |
| N5 | 0.01862 (18) | 0.42494 (9) | 0.38607 (15) | 0.0401 (4) | |
| O1 | 0.6627 (2) | 0.59621 (11) | 0.78120 (17) | 0.0805 (6) | |
| H1A | 0.6074 | 0.5640 | 0.7587 | 0.097* | |
| O2 | 0.34881 (15) | 0.59685 (7) | 0.50147 (13) | 0.0414 (3) | |
| O3A | 0.2209 (4) | 0.24814 (15) | 0.6492 (3) | 0.0749 (8) | 0.67 |
| O3B | 0.3899 (6) | 0.2757 (2) | 0.7190 (5) | 0.0635 (15) | 0.33 |
| O4 | 0.12933 (16) | 0.53067 (7) | 0.33856 (12) | 0.0414 (3) | |
| O5 | −0.16592 (19) | 0.36688 (8) | 0.24617 (14) | 0.0604 (5) | |
| H5B | −0.1070 | 0.3703 | 0.3019 | 0.072* | |
| C1 | 0.6346 (3) | 0.65344 (14) | 0.7173 (2) | 0.0581 (7) | |
| C2 | 0.5294 (2) | 0.65449 (12) | 0.6241 (2) | 0.0461 (5) | |
| C3 | 0.5081 (3) | 0.71686 (12) | 0.5633 (2) | 0.0594 (7) | |
| H3A | 0.4376 | 0.7182 | 0.5022 | 0.071* | |
| C4 | 0.5894 (3) | 0.77687 (15) | 0.5916 (3) | 0.0784 (9) | |
| H4A | 0.5743 | 0.8181 | 0.5498 | 0.094* | |
| C5 | 0.6921 (4) | 0.77491 (18) | 0.6816 (3) | 0.0911 (11) | |
| H5A | 0.7467 | 0.8153 | 0.7011 | 0.109* | |
| C6 | 0.7166 (3) | 0.71460 (19) | 0.7439 (3) | 0.0849 (10) | |
| H6A | 0.7882 | 0.7144 | 0.8044 | 0.102* | |
| C7 | 0.4416 (2) | 0.59175 (11) | 0.58840 (18) | 0.0386 (5) | |
| C8 | 0.3669 (2) | 0.42120 (11) | 0.66539 (18) | 0.0409 (5) | |
| C9 | 0.2605 (2) | 0.36376 (11) | 0.62829 (19) | 0.0405 (5) | |
| C10 | 0.1317 (2) | 0.37065 (10) | 0.54304 (19) | 0.0394 (5) | |
| C11 | 0.0336 (2) | 0.48128 (10) | 0.31893 (17) | 0.0355 (4) | |
| C12 | −0.0688 (2) | 0.48412 (11) | 0.21619 (17) | 0.0402 (5) | |
| C13 | −0.1615 (3) | 0.42678 (13) | 0.1830 (2) | 0.0485 (5) | |
| C14 | −0.2529 (3) | 0.43151 (16) | 0.0835 (2) | 0.0647 (7) | |
| H14A | −0.3146 | 0.3939 | 0.0613 | 0.078* | |
| C15 | −0.2519 (3) | 0.49149 (17) | 0.0182 (2) | 0.0718 (8) | |
| H15A | −0.3126 | 0.4939 | −0.0485 | 0.086* | |
| C16 | −0.1628 (3) | 0.54807 (16) | 0.0496 (2) | 0.0679 (7) | |
| H16A | −0.1637 | 0.5886 | 0.0047 | 0.082* | |
| C17 | −0.0720 (3) | 0.54442 (13) | 0.14814 (19) | 0.0510 (6) | |
| H17A | −0.0120 | 0.5828 | 0.1695 | 0.061* | |
| C18 | 0.4736 (3) | 0.41084 (14) | 0.7671 (2) | 0.0635 (7) | |
| H18A | 0.4647 | 0.4498 | 0.8190 | 0.095* | |
| H18B | 0.5765 | 0.4079 | 0.7412 | 0.095* | |
| H18C | 0.4478 | 0.3682 | 0.8062 | 0.095* | |
| C19 | 0.0055 (3) | 0.31770 (13) | 0.5377 (3) | 0.0628 (7) | |
| H19A | −0.0886 | 0.3407 | 0.5167 | 0.094* | |
| H19B | −0.0038 | 0.2958 | 0.6117 | 0.094* | |
| H19C | 0.0278 | 0.2826 | 0.4812 | 0.094* |
| Cu1 | 0.03850 (14) | 0.03025 (14) | 0.04393 (15) | −0.00304 (11) | −0.00734 (9) | 0.00278 (11) |
| N1 | 0.0401 (9) | 0.0385 (10) | 0.0495 (11) | −0.0008 (8) | −0.0091 (8) | −0.0045 (8) |
| N2 | 0.0340 (8) | 0.0354 (10) | 0.0443 (10) | 0.0032 (7) | −0.0031 (7) | −0.0007 (8) |
| N3 | 0.0906 (18) | 0.0425 (13) | 0.0885 (18) | 0.0125 (12) | 0.0220 (14) | 0.0210 (12) |
| N4 | 0.0365 (9) | 0.0305 (9) | 0.0418 (10) | 0.0005 (7) | −0.0045 (7) | −0.0002 (7) |
| N5 | 0.0402 (9) | 0.0339 (9) | 0.0459 (10) | −0.0028 (7) | −0.0059 (8) | −0.0011 (8) |
| O1 | 0.0776 (13) | 0.0845 (15) | 0.0776 (14) | −0.0080 (11) | −0.0329 (11) | −0.0108 (11) |
| O2 | 0.0395 (8) | 0.0317 (8) | 0.0527 (9) | −0.0020 (6) | −0.0074 (7) | 0.0017 (6) |
| O3A | 0.093 (2) | 0.0467 (17) | 0.084 (2) | 0.0043 (15) | −0.0252 (17) | 0.0092 (14) |
| O3B | 0.072 (3) | 0.037 (3) | 0.079 (4) | 0.012 (2) | −0.045 (3) | 0.014 (2) |
| O4 | 0.0468 (8) | 0.0340 (8) | 0.0430 (8) | −0.0071 (7) | −0.0071 (6) | 0.0029 (6) |
| O5 | 0.0683 (11) | 0.0463 (10) | 0.0655 (11) | −0.0133 (8) | −0.0179 (9) | −0.0114 (8) |
| C1 | 0.0483 (14) | 0.0602 (17) | 0.0656 (17) | −0.0051 (12) | −0.0011 (12) | −0.0208 (13) |
| C2 | 0.0377 (11) | 0.0423 (13) | 0.0586 (14) | −0.0036 (10) | 0.0049 (10) | −0.0157 (11) |
| C3 | 0.0614 (16) | 0.0400 (14) | 0.0772 (18) | −0.0083 (12) | 0.0089 (13) | −0.0106 (12) |
| C4 | 0.083 (2) | 0.0457 (16) | 0.107 (3) | −0.0180 (15) | 0.0168 (19) | −0.0154 (16) |
| C5 | 0.083 (2) | 0.068 (2) | 0.123 (3) | −0.0347 (18) | 0.013 (2) | −0.040 (2) |
| C6 | 0.0618 (19) | 0.094 (3) | 0.098 (2) | −0.0187 (18) | −0.0068 (17) | −0.044 (2) |
| C7 | 0.0328 (10) | 0.0360 (11) | 0.0471 (13) | 0.0016 (8) | 0.0023 (9) | −0.0067 (9) |
| C8 | 0.0383 (11) | 0.0382 (11) | 0.0461 (13) | 0.0094 (9) | −0.0020 (9) | 0.0026 (9) |
| C9 | 0.0414 (11) | 0.0332 (11) | 0.0468 (12) | 0.0057 (9) | 0.0012 (9) | 0.0072 (9) |
| C10 | 0.0377 (11) | 0.0288 (10) | 0.0517 (13) | 0.0036 (8) | 0.0040 (9) | 0.0010 (9) |
| C11 | 0.0362 (10) | 0.0325 (10) | 0.0377 (11) | 0.0030 (8) | −0.0009 (8) | −0.0051 (8) |
| C12 | 0.0394 (11) | 0.0439 (12) | 0.0370 (11) | 0.0012 (9) | −0.0011 (8) | −0.0068 (9) |
| C13 | 0.0475 (13) | 0.0499 (14) | 0.0479 (13) | −0.0009 (10) | −0.0040 (10) | −0.0118 (11) |
| C14 | 0.0592 (15) | 0.076 (2) | 0.0583 (16) | −0.0082 (14) | −0.0143 (12) | −0.0202 (15) |
| C15 | 0.0670 (17) | 0.098 (2) | 0.0495 (14) | −0.0008 (17) | −0.0213 (12) | −0.0039 (16) |
| C16 | 0.0711 (17) | 0.082 (2) | 0.0497 (15) | 0.0027 (16) | −0.0104 (13) | 0.0140 (14) |
| C17 | 0.0506 (13) | 0.0555 (15) | 0.0466 (13) | −0.0031 (11) | −0.0061 (10) | 0.0035 (11) |
| C18 | 0.0716 (17) | 0.0571 (16) | 0.0605 (16) | 0.0002 (13) | −0.0220 (13) | 0.0119 (13) |
| C19 | 0.0526 (14) | 0.0424 (14) | 0.093 (2) | −0.0080 (11) | −0.0113 (14) | 0.0233 (13) |
| Cu1—O2 | 1.9153 (13) | C4—C5 | 1.362 (4) |
| Cu1—N2 | 1.9230 (16) | C4—H4A | 0.9300 |
| Cu1—N4 | 1.9231 (16) | C5—C6 | 1.371 (5) |
| Cu1—O4 | 1.9308 (14) | C5—H5A | 0.9300 |
| N1—C7 | 1.333 (3) | C6—H6A | 0.9300 |
| N1—N2 | 1.395 (2) | C8—C9 | 1.493 (3) |
| N2—C8 | 1.293 (3) | C8—C18 | 1.501 (3) |
| N3—O3B | 1.140 (4) | C9—C10 | 1.489 (3) |
| N3—O3A | 1.236 (3) | C10—C19 | 1.497 (3) |
| N3—C9 | 1.288 (3) | C11—C12 | 1.476 (3) |
| N4—C10 | 1.294 (3) | C12—C17 | 1.393 (3) |
| N4—N5 | 1.388 (2) | C12—C13 | 1.408 (3) |
| N5—C11 | 1.334 (3) | C13—C14 | 1.392 (3) |
| O1—C1 | 1.337 (3) | C14—C15 | 1.370 (4) |
| O1—H1A | 0.8200 | C14—H14A | 0.9300 |
| O2—C7 | 1.284 (2) | C15—C16 | 1.374 (4) |
| O3A—O3B | 1.752 (5) | C15—H15A | 0.9300 |
| O4—C11 | 1.277 (2) | C16—C17 | 1.379 (3) |
| O5—C13 | 1.356 (3) | C16—H16A | 0.9300 |
| O5—H5B | 0.8200 | C17—H17A | 0.9300 |
| C1—C6 | 1.398 (4) | C18—H18A | 0.9600 |
| C1—C2 | 1.404 (3) | C18—H18B | 0.9600 |
| C2—C3 | 1.391 (3) | C18—H18C | 0.9600 |
| C2—C7 | 1.474 (3) | C19—H19A | 0.9600 |
| C3—C4 | 1.381 (3) | C19—H19B | 0.9600 |
| C3—H3A | 0.9300 | C19—H19C | 0.9600 |
| O2—Cu1—N2 | 83.48 (6) | N2—C8—C9 | 119.70 (18) |
| O2—Cu1—N4 | 171.09 (7) | N2—C8—C18 | 120.1 (2) |
| N2—Cu1—N4 | 93.19 (7) | C9—C8—C18 | 120.22 (19) |
| O2—Cu1—O4 | 100.02 (6) | N3—C9—C10 | 119.2 (2) |
| N2—Cu1—O4 | 176.23 (6) | N3—C9—C8 | 114.9 (2) |
| N4—Cu1—O4 | 83.54 (6) | C10—C9—C8 | 125.81 (18) |
| C7—N1—N2 | 110.44 (16) | N4—C10—C9 | 118.78 (18) |
| C8—N2—N1 | 117.96 (17) | N4—C10—C19 | 120.15 (19) |
| C8—N2—Cu1 | 130.03 (15) | C9—C10—C19 | 121.07 (19) |
| N1—N2—Cu1 | 111.99 (13) | O4—C11—N5 | 124.12 (18) |
| O3B—N3—O3A | 94.9 (3) | O4—C11—C12 | 120.09 (18) |
| O3B—N3—C9 | 138.1 (4) | N5—C11—C12 | 115.79 (18) |
| O3A—N3—C9 | 125.1 (3) | C17—C12—C13 | 118.7 (2) |
| C10—N4—N5 | 117.91 (17) | C17—C12—C11 | 119.46 (19) |
| C10—N4—Cu1 | 130.13 (14) | C13—C12—C11 | 121.9 (2) |
| N5—N4—Cu1 | 111.46 (12) | O5—C13—C14 | 118.6 (2) |
| C11—N5—N4 | 111.23 (16) | O5—C13—C12 | 121.8 (2) |
| C1—O1—H1A | 109.5 | C14—C13—C12 | 119.5 (2) |
| C7—O2—Cu1 | 109.58 (13) | C15—C14—C13 | 120.1 (2) |
| C11—O4—Cu1 | 109.08 (13) | C15—C14—H14A | 119.9 |
| C13—O5—H5B | 109.5 | C13—C14—H14A | 119.9 |
| O1—C1—C6 | 117.9 (3) | C14—C15—C16 | 121.1 (2) |
| O1—C1—C2 | 123.2 (2) | C14—C15—H15A | 119.4 |
| C6—C1—C2 | 118.9 (3) | C16—C15—H15A | 119.4 |
| C3—C2—C1 | 118.7 (2) | C15—C16—C17 | 119.6 (3) |
| C3—C2—C7 | 119.0 (2) | C15—C16—H16A | 120.2 |
| C1—C2—C7 | 122.2 (2) | C17—C16—H16A | 120.2 |
| C4—C3—C2 | 121.5 (3) | C16—C17—C12 | 121.0 (2) |
| C4—C3—H3A | 119.2 | C16—C17—H17A | 119.5 |
| C2—C3—H3A | 119.2 | C12—C17—H17A | 119.5 |
| C5—C4—C3 | 119.1 (3) | C8—C18—H18A | 109.5 |
| C5—C4—H4A | 120.4 | C8—C18—H18B | 109.5 |
| C3—C4—H4A | 120.4 | H18A—C18—H18B | 109.5 |
| C4—C5—C6 | 121.3 (3) | C8—C18—H18C | 109.5 |
| C4—C5—H5A | 119.3 | H18A—C18—H18C | 109.5 |
| C6—C5—H5A | 119.3 | H18B—C18—H18C | 109.5 |
| C5—C6—C1 | 120.5 (3) | C10—C19—H19A | 109.5 |
| C5—C6—H6A | 119.8 | C10—C19—H19B | 109.5 |
| C1—C6—H6A | 119.8 | H19A—C19—H19B | 109.5 |
| O2—C7—N1 | 124.22 (19) | C10—C19—H19C | 109.5 |
| O2—C7—C2 | 118.43 (19) | H19A—C19—H19C | 109.5 |
| N1—C7—C2 | 117.36 (19) | H19B—C19—H19C | 109.5 |
| C7—N1—N2—C8 | −175.43 (18) | Cu1—N2—C8—C9 | −2.6 (3) |
| C7—N1—N2—Cu1 | 5.9 (2) | N1—N2—C8—C18 | −0.3 (3) |
| O2—Cu1—N2—C8 | 177.17 (19) | Cu1—N2—C8—C18 | 178.08 (16) |
| N4—Cu1—N2—C8 | 5.46 (19) | O3B—N3—C9—C10 | 160.8 (5) |
| O2—Cu1—N2—N1 | −4.33 (12) | O3A—N3—C9—C10 | 0.8 (4) |
| N4—Cu1—N2—N1 | −176.04 (13) | O3B—N3—C9—C8 | −16.5 (6) |
| N2—Cu1—N4—C10 | 4.20 (19) | O3A—N3—C9—C8 | −176.5 (3) |
| O4—Cu1—N4—C10 | −177.69 (19) | N2—C8—C9—N3 | 166.7 (2) |
| N2—Cu1—N4—N5 | 175.78 (13) | C18—C8—C9—N3 | −14.0 (3) |
| O4—Cu1—N4—N5 | −6.10 (12) | N2—C8—C9—C10 | −10.4 (3) |
| C10—N4—N5—C11 | −179.12 (18) | C18—C8—C9—C10 | 168.9 (2) |
| Cu1—N4—N5—C11 | 8.1 (2) | N5—N4—C10—C9 | 173.72 (17) |
| N2—Cu1—O2—C7 | 1.81 (13) | Cu1—N4—C10—C9 | −15.1 (3) |
| O4—Cu1—O2—C7 | −176.79 (13) | N5—N4—C10—C19 | −5.6 (3) |
| C9—N3—O3A—O3B | 166.8 (5) | Cu1—N4—C10—C19 | 165.55 (17) |
| C9—N3—O3B—O3A | −163.7 (6) | N3—C9—C10—N4 | −157.7 (2) |
| O2—Cu1—O4—C11 | −169.01 (12) | C8—C9—C10—N4 | 19.3 (3) |
| N4—Cu1—O4—C11 | 2.74 (13) | N3—C9—C10—C19 | 21.6 (3) |
| O1—C1—C2—C3 | 179.8 (2) | C8—C9—C10—C19 | −161.4 (2) |
| C6—C1—C2—C3 | −1.4 (4) | Cu1—O4—C11—N5 | 1.5 (2) |
| O1—C1—C2—C7 | −0.6 (4) | Cu1—O4—C11—C12 | −178.11 (14) |
| C6—C1—C2—C7 | 178.3 (2) | N4—N5—C11—O4 | −6.6 (3) |
| C1—C2—C3—C4 | 0.9 (4) | N4—N5—C11—C12 | 172.98 (16) |
| C7—C2—C3—C4 | −178.7 (2) | O4—C11—C12—C17 | −7.1 (3) |
| C2—C3—C4—C5 | −0.4 (4) | N5—C11—C12—C17 | 173.30 (19) |
| C3—C4—C5—C6 | 0.3 (5) | O4—C11—C12—C13 | 171.42 (19) |
| C4—C5—C6—C1 | −0.8 (5) | N5—C11—C12—C13 | −8.2 (3) |
| O1—C1—C6—C5 | −179.8 (3) | C17—C12—C13—O5 | −178.9 (2) |
| C2—C1—C6—C5 | 1.3 (4) | C11—C12—C13—O5 | 2.6 (3) |
| Cu1—O2—C7—N1 | 1.3 (2) | C17—C12—C13—C14 | 0.3 (3) |
| Cu1—O2—C7—C2 | −179.02 (15) | C11—C12—C13—C14 | −178.2 (2) |
| N2—N1—C7—O2 | −4.9 (3) | O5—C13—C14—C15 | 179.5 (2) |
| N2—N1—C7—C2 | 175.42 (17) | C12—C13—C14—C15 | 0.3 (4) |
| C3—C2—C7—O2 | 0.4 (3) | C13—C14—C15—C16 | −0.6 (4) |
| C1—C2—C7—O2 | −179.2 (2) | C14—C15—C16—C17 | 0.4 (4) |
| C3—C2—C7—N1 | −179.9 (2) | C15—C16—C17—C12 | 0.2 (4) |
| C1—C2—C7—N1 | 0.4 (3) | C13—C12—C17—C16 | −0.5 (3) |
| N1—N2—C8—C9 | 178.94 (17) | C11—C12—C17—C16 | 178.0 (2) |
| H··· | ||||
| O1—H1A···N1 | 0.82 | 1.86 | 2.586 (2) | 147 |
| O5—H5B···N5 | 0.82 | 1.79 | 2.519 (2) | 148 |
| C19—H19A···O2i | 0.96 | 2.58 | 3.525 (3) | 170 |
| O3A—H···O5ii | . | . | 2.643 (3) | . |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.82 | 1.86 | 2.586 (2) | 147 |
| O5—H5 | 0.82 | 1.79 | 2.519 (2) | 148 |
| C19—H19 | 0.96 | 2.58 | 3.525 (3) | 170 |
| O3 | 2.643 (3) |
Symmetry codes: (i) ; (ii) .