| Literature DB >> 21587651 |
Hadi D Arman, Trupta Kaulgud, Edward R T Tiekink.
Abstract
The asymmetric unit of the title 1:1 adduct, C(10)H(8)N(2)S·C(6)F(4)I(2), comprises a half-mol-ecule of 1,2,4,5-tetra-fluoro-3,6-diiodo-benzene, and half a 4-(pyridin-4-ylsulfan-yl)pyridine mol-ecule. The former is completed by crystallographic inversion symmetry, the latter by twofold symmetry, with the S atom lying on the rotation axis. The almost planar 1,2,4,5-tetra-fluoro-3,6-diiodo-benzene mol-ecule (r.m.s. deviation of all 12 atoms = 0.016 Å) and twisted 4-(pyridin-4-ylsulfan-yl)pyridine mol-ecule [dihedral angle between pyridyl rings = 54.88 (13)°] are connected by N⋯I inter-actions [2.838 (4) Å], generating a supra-molecular chain with a step-ladder topology. These chains are connected in the crystal by C-H⋯F and C-H⋯π(pyrid-yl) inter-actions.Entities:
Year: 2010 PMID: 21587651 PMCID: PMC2983392 DOI: 10.1107/S1600536810038316
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H8N2S·C6F4I2 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3043 reflections |
| θ = 3.0–40.2° | |
| µ = 3.72 mm−1 | |
| β = 97.989 (7)° | Block, yellow |
| 0.30 × 0.20 × 0.05 mm | |
| Rigaku AFC12K/SATURN724 diffractometer | 1823 independent reflections |
| Radiation source: fine-focus sealed tube | 1733 reflections with |
| graphite | |
| ω scans | θmax = 26.5°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 5209 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1823 reflections | (Δ/σ)max = 0.001 |
| 114 parameters | Δρmax = 1.34 e Å−3 |
| 0 restraints | Δρmin = −0.63 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| I1 | 0.33988 (2) | 0.75767 (5) | 0.089898 (12) | 0.02060 (11) | |
| F1 | 0.4107 (2) | 0.9003 (5) | −0.03751 (12) | 0.0253 (6) | |
| F2 | 0.5292 (2) | 0.6993 (5) | −0.10663 (12) | 0.0257 (6) | |
| C1 | 0.4356 (3) | 0.6036 (8) | 0.0360 (2) | 0.0186 (9) | |
| C2 | 0.4540 (3) | 0.6999 (7) | −0.0181 (2) | 0.0180 (9) | |
| C3 | 0.5168 (3) | 0.5980 (8) | −0.0534 (2) | 0.0205 (9) | |
| S1 | 0.0000 | 0.4266 (3) | 0.2500 | 0.0201 (3) | |
| N1 | 0.2103 (3) | −0.0202 (7) | 0.15987 (18) | 0.0248 (9) | |
| C4 | 0.1787 (3) | 0.1842 (9) | 0.1379 (2) | 0.0239 (10) | |
| H4 | 0.2032 | 0.2404 | 0.1028 | 0.029* | |
| C5 | 0.1121 (3) | 0.3192 (8) | 0.1635 (2) | 0.0215 (9) | |
| H5 | 0.0905 | 0.4616 | 0.1455 | 0.026* | |
| C6 | 0.0779 (3) | 0.2417 (8) | 0.2158 (2) | 0.0191 (9) | |
| C7 | 0.1112 (3) | 0.0326 (8) | 0.2401 (2) | 0.0193 (9) | |
| H7 | 0.0900 | −0.0242 | 0.2763 | 0.023* | |
| C8 | 0.1762 (3) | −0.0926 (8) | 0.2104 (2) | 0.0203 (9) | |
| H8 | 0.1977 | −0.2373 | 0.2268 | 0.024* |
| I1 | 0.01922 (17) | 0.02358 (17) | 0.01968 (17) | 0.00034 (12) | 0.00505 (11) | −0.00148 (11) |
| F1 | 0.0271 (15) | 0.0212 (14) | 0.0285 (15) | 0.0061 (12) | 0.0072 (12) | 0.0045 (11) |
| F2 | 0.0288 (16) | 0.0283 (14) | 0.0218 (14) | 0.0026 (12) | 0.0099 (11) | 0.0084 (11) |
| C1 | 0.013 (2) | 0.023 (2) | 0.020 (2) | −0.0024 (17) | 0.0021 (16) | −0.0062 (17) |
| C2 | 0.015 (2) | 0.017 (2) | 0.021 (2) | −0.0005 (17) | −0.0009 (16) | 0.0016 (16) |
| C3 | 0.021 (2) | 0.023 (2) | 0.018 (2) | −0.0036 (19) | 0.0029 (17) | 0.0006 (17) |
| S1 | 0.0203 (8) | 0.0166 (7) | 0.0245 (8) | 0.000 | 0.0068 (6) | 0.000 |
| N1 | 0.020 (2) | 0.026 (2) | 0.028 (2) | 0.0012 (17) | 0.0057 (16) | −0.0018 (17) |
| C4 | 0.017 (2) | 0.031 (3) | 0.023 (2) | −0.0047 (19) | 0.0040 (18) | 0.0002 (19) |
| C5 | 0.022 (2) | 0.020 (2) | 0.022 (2) | −0.0007 (18) | 0.0005 (18) | 0.0007 (17) |
| C6 | 0.015 (2) | 0.020 (2) | 0.023 (2) | −0.0012 (17) | 0.0041 (17) | −0.0043 (17) |
| C7 | 0.014 (2) | 0.019 (2) | 0.024 (2) | −0.0025 (17) | 0.0003 (17) | −0.0017 (17) |
| C8 | 0.016 (2) | 0.018 (2) | 0.026 (2) | −0.0010 (17) | −0.0013 (17) | −0.0009 (17) |
| I1—C1 | 2.101 (4) | N1—C4 | 1.337 (6) |
| F1—C2 | 1.355 (5) | C4—C5 | 1.389 (7) |
| F2—C3 | 1.352 (5) | C4—H4 | 0.9500 |
| C1—C2 | 1.379 (6) | C5—C6 | 1.387 (6) |
| C1—C3i | 1.375 (6) | C5—H5 | 0.9500 |
| C2—C3 | 1.381 (6) | C6—C7 | 1.385 (6) |
| C3—C1i | 1.375 (6) | C7—C8 | 1.392 (6) |
| S1—C6ii | 1.766 (4) | C7—H7 | 0.9500 |
| S1—C6 | 1.766 (4) | C8—H8 | 0.9500 |
| N1—C8 | 1.342 (6) | ||
| C2—C1—C3i | 116.9 (4) | C5—C4—H4 | 118.0 |
| C2—C1—I1 | 121.8 (3) | C6—C5—C4 | 118.5 (4) |
| C3i—C1—I1 | 121.3 (3) | C6—C5—H5 | 120.7 |
| C1—C2—F1 | 120.0 (4) | C4—C5—H5 | 120.7 |
| C1—C2—C3 | 121.6 (4) | C7—C6—C5 | 118.6 (4) |
| F1—C2—C3 | 118.4 (4) | C7—C6—S1 | 124.0 (4) |
| F2—C3—C1i | 120.3 (4) | C5—C6—S1 | 117.3 (3) |
| F2—C3—C2 | 118.2 (4) | C6—C7—C8 | 118.6 (4) |
| C1i—C3—C2 | 121.5 (4) | C6—C7—H7 | 120.7 |
| C6ii—S1—C6 | 104.8 (3) | C8—C7—H7 | 120.7 |
| C8—N1—C4 | 116.7 (4) | N1—C8—C7 | 123.7 (4) |
| N1—C4—C5 | 123.9 (4) | N1—C8—H8 | 118.2 |
| N1—C4—H4 | 118.0 | C7—C8—H8 | 118.2 |
| C3i—C1—C2—F1 | −179.1 (4) | N1—C4—C5—C6 | 1.7 (7) |
| I1—C1—C2—F1 | 0.6 (6) | C4—C5—C6—C7 | −0.3 (7) |
| C3i—C1—C2—C3 | 0.4 (7) | C4—C5—C6—S1 | 175.7 (4) |
| I1—C1—C2—C3 | −179.9 (3) | C6ii—S1—C6—C7 | −34.9 (3) |
| C1—C2—C3—F2 | 178.2 (4) | C6ii—S1—C6—C5 | 149.3 (4) |
| F1—C2—C3—F2 | −2.3 (6) | C5—C6—C7—C8 | −1.1 (6) |
| C1—C2—C3—C1i | −0.4 (8) | S1—C6—C7—C8 | −176.8 (3) |
| F1—C2—C3—C1i | 179.0 (4) | C4—N1—C8—C7 | 0.0 (7) |
| C8—N1—C4—C5 | −1.5 (7) | C6—C7—C8—N1 | 1.3 (7) |
| Cg1 is the centroid of the N1,C4–C8 ring. |
| H··· | ||||
| C5—H5···F1iii | 0.95 | 2.52 | 3.213 (5) | 130 |
| C8—H8···Cg1iv | 0.95 | 2.82 | 3.557 (5) | 135 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the N1,C4–C8 ring.
| H⋯ | ||||
|---|---|---|---|---|
| C5—H5⋯F1i | 0.95 | 2.52 | 3.213 (5) | 130 |
| C8—H8⋯ | 0.95 | 2.82 | 3.557 (5) | 135 |
Symmetry codes: (i) ; (ii) .