Literature DB >> 21583972

1-(4-Methoxy-phen-yl)-3-phenyl-1H-pyrazol-5-amine.

Isuru R Kumarasinghe1, Victor J Hruby, Gary S Nichol.   

Abstract

The synthesis of the title compound, C(16)H(15)N(3)O, is regiospecific and single-crystal X-ray diffraction provides the only means of unambiguous structural analysis, with the benzene ring bonded to the imine C atom. The phenyl ring and the essentially planar (r.m.s. deviation 0.0354 Å) methoxy-benzene group are rotated by 29.41 (5) and 37.01 (5)°, respectively, from the central pyrazole ring. An inter-molecular N-H⋯N hydrogen bond links symmetry-related mol-ecules into a C(5) chain, which runs parallel to the b axis.

Entities:  

Year:  2009        PMID: 21583972      PMCID: PMC2977835          DOI: 10.1107/S1600536809015463

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to this study, see: Gavrin et al. (2007 ▶); Joshi et al. (1979 ▶); Michaux & Charlier (2004 ▶); Ossipov et al. (2004 ▶); Raffa (2001 ▶).

Experimental

Crystal data

C16H15N3O M = 265.31 Orthorhombic, a = 14.9638 (6) Å b = 6.3639 (2) Å c = 28.2466 (12) Å V = 2689.87 (18) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.35 × 0.35 × 0.05 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: none 11632 measured reflections 3019 independent reflections 2256 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.111 S = 1.02 3019 reflections 190 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.15 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXTL and local programs. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809015463/lh2810sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809015463/lh2810Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report Enhanced figure: interactive version of Fig. 1
C16H15N3OF(000) = 1120
Mr = 265.31Dx = 1.310 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 2475 reflections
a = 14.9638 (6) Åθ = 2.7–28.6°
b = 6.3639 (2) ŵ = 0.09 mm1
c = 28.2466 (12) ÅT = 296 K
V = 2689.87 (18) Å3Plate, colourless
Z = 80.35 × 0.35 × 0.05 mm
Bruker Kappa APEXII diffractometer2256 reflections with I > 2σ(I)
Radiation source: sealed tubeRint = 0.031
graphiteθmax = 28.3°, θmin = 2.0°
φ and ω scansh = −19→16
11632 measured reflectionsk = −7→6
3019 independent reflectionsl = −36→37
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: difference Fourier map
wR(F2) = 0.111H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.048P)2 + 0.671P] where P = (Fo2 + 2Fc2)/3
3019 reflections(Δ/σ)max = 0.001
190 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.15 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O0.37170 (8)0.3584 (2)0.56552 (3)0.0537 (3)
N10.38199 (8)0.10523 (19)0.75399 (4)0.0327 (3)
N20.37654 (8)0.2595 (2)0.78830 (4)0.0357 (3)
N30.39632 (11)−0.2693 (2)0.74725 (6)0.0506 (4)
H3NA0.3945 (12)−0.386 (3)0.7646 (6)0.057 (6)*
H3NB0.3982 (15)−0.264 (4)0.7192 (8)0.083 (8)*
C10.38472 (9)0.1542 (2)0.82878 (5)0.0334 (3)
C20.39560 (10)−0.0607 (3)0.82140 (5)0.0401 (4)
H20.4031−0.16390.84440.048*
C30.39302 (9)−0.0890 (2)0.77325 (5)0.0359 (3)
C40.37681 (9)0.1656 (2)0.70563 (4)0.0317 (3)
C50.42957 (9)0.0699 (3)0.67137 (5)0.0391 (4)
H50.4681−0.03860.67970.047*
C60.42468 (10)0.1361 (3)0.62484 (5)0.0414 (4)
H60.45860.06880.60180.050*
C70.36981 (9)0.3015 (3)0.61242 (5)0.0379 (4)
C80.31728 (9)0.3982 (2)0.64632 (5)0.0374 (3)
H80.28030.50970.63810.045*
C90.32044 (9)0.3268 (2)0.69274 (4)0.0347 (3)
H90.28400.38870.71550.042*
C100.32253 (15)0.5386 (4)0.55199 (6)0.0687 (6)
H10A0.26040.51750.55910.103*
H10B0.32960.56200.51860.103*
H10C0.34420.65870.56910.103*
C110.38252 (9)0.2644 (3)0.87483 (5)0.0354 (3)
C120.33514 (10)0.4489 (3)0.88095 (5)0.0421 (4)
H120.30410.50730.85560.050*
C130.33371 (12)0.5473 (3)0.92489 (6)0.0534 (4)
H130.30180.67140.92890.064*
C140.37933 (12)0.4620 (3)0.96249 (6)0.0567 (5)
H140.37840.52850.99180.068*
C150.42634 (12)0.2785 (3)0.95670 (5)0.0550 (5)
H150.45710.22070.98220.066*
C160.42822 (11)0.1790 (3)0.91320 (5)0.0448 (4)
H160.46010.05460.90960.054*
U11U22U33U12U13U23
O0.0695 (8)0.0595 (9)0.0320 (5)0.0105 (6)0.0029 (5)0.0047 (5)
N10.0413 (6)0.0248 (8)0.0320 (5)−0.0005 (5)−0.0026 (4)−0.0017 (4)
N20.0451 (7)0.0306 (8)0.0315 (5)−0.0003 (5)−0.0004 (5)−0.0021 (5)
N30.0764 (10)0.0275 (9)0.0478 (8)−0.0004 (7)−0.0067 (7)−0.0014 (7)
C10.0349 (7)0.0311 (9)0.0342 (6)−0.0036 (6)0.0004 (5)0.0033 (6)
C20.0495 (8)0.0308 (10)0.0399 (7)−0.0004 (7)−0.0037 (6)0.0071 (6)
C30.0386 (7)0.0260 (9)0.0430 (7)−0.0005 (6)−0.0046 (5)0.0011 (6)
C40.0347 (7)0.0290 (9)0.0315 (6)−0.0037 (6)−0.0026 (5)0.0003 (5)
C50.0389 (7)0.0379 (10)0.0406 (7)0.0068 (6)−0.0009 (6)−0.0013 (6)
C60.0425 (8)0.0448 (11)0.0370 (7)0.0064 (7)0.0045 (6)−0.0061 (6)
C70.0418 (7)0.0405 (10)0.0315 (6)−0.0032 (6)−0.0007 (5)−0.0002 (6)
C80.0427 (8)0.0324 (9)0.0370 (7)0.0053 (6)−0.0031 (5)−0.0006 (6)
C90.0373 (7)0.0327 (9)0.0342 (6)0.0017 (6)0.0012 (5)−0.0048 (6)
C100.0913 (15)0.0668 (16)0.0481 (10)0.0174 (12)−0.0012 (9)0.0197 (9)
C110.0380 (7)0.0355 (10)0.0328 (6)−0.0062 (6)0.0033 (5)0.0032 (6)
C120.0463 (8)0.0394 (10)0.0406 (7)0.0001 (7)0.0015 (6)0.0012 (7)
C130.0587 (10)0.0483 (12)0.0532 (9)0.0046 (8)0.0083 (7)−0.0089 (8)
C140.0659 (11)0.0678 (15)0.0363 (8)−0.0051 (10)0.0071 (7)−0.0104 (8)
C150.0639 (11)0.0683 (15)0.0329 (7)−0.0030 (9)−0.0023 (7)0.0052 (8)
C160.0525 (9)0.0436 (11)0.0382 (7)0.0026 (8)0.0003 (6)0.0046 (7)
O—C71.3736 (16)C7—C81.3834 (19)
O—C101.415 (2)C8—H80.9300
N1—N21.3820 (16)C8—C91.3885 (18)
N1—C31.3607 (19)C9—H90.9300
N1—C41.4211 (16)C10—H10A0.9600
N2—C11.3307 (17)C10—H10B0.9600
N3—H3NA0.89 (2)C10—H10C0.9600
N3—H3NB0.79 (2)C11—C121.382 (2)
N3—C31.363 (2)C11—C161.392 (2)
C1—C21.393 (2)C12—H120.9300
C1—C111.4782 (19)C12—C131.391 (2)
C2—H20.9300C13—H130.9300
C2—C31.373 (2)C13—C141.374 (2)
C4—C51.3896 (19)C14—H140.9300
C4—C91.377 (2)C14—C151.373 (3)
C5—H50.9300C15—H150.9300
C5—C61.3823 (19)C15—C161.383 (2)
C6—H60.9300C16—H160.9300
C6—C71.380 (2)
C7—O—C10117.63 (13)C7—C8—C9119.26 (14)
N2—N1—C3111.85 (11)H8—C8—C9120.4
N2—N1—C4118.61 (12)C4—C9—C8120.95 (13)
C3—N1—C4129.54 (12)C4—C9—H9119.5
N1—N2—C1103.86 (12)C8—C9—H9119.5
H3NA—N3—H3NB126 (2)O—C10—H10A109.5
H3NA—N3—C3113.9 (12)O—C10—H10B109.5
H3NB—N3—C3120.3 (18)O—C10—H10C109.5
N2—C1—C2112.11 (12)H10A—C10—H10B109.5
N2—C1—C11121.01 (14)H10A—C10—H10C109.5
C2—C1—C11126.87 (13)H10B—C10—H10C109.5
C1—C2—H2127.1C1—C11—C12121.62 (13)
C1—C2—C3105.89 (13)C1—C11—C16119.26 (14)
H2—C2—C3127.1C12—C11—C16119.10 (14)
N1—C3—N3123.63 (13)C11—C12—H12119.9
N1—C3—C2106.28 (13)C11—C12—C13120.14 (15)
N3—C3—C2130.03 (15)H12—C12—C13119.9
N1—C4—C5121.32 (13)C12—C13—H13119.9
N1—C4—C9119.27 (12)C12—C13—C14120.28 (17)
C5—C4—C9119.38 (12)H13—C13—C14119.9
C4—C5—H5120.1C13—C14—H14120.1
C4—C5—C6119.90 (14)C13—C14—C15119.89 (15)
H5—C5—C6120.1H14—C14—C15120.1
C5—C6—H6119.8C14—C15—H15119.8
C5—C6—C7120.38 (13)C14—C15—C16120.38 (15)
H6—C6—C7119.8H15—C15—C16119.8
O—C7—C6115.73 (13)C11—C16—C15120.20 (16)
O—C7—C8124.18 (14)C11—C16—H16119.9
C6—C7—C8120.09 (13)C15—C16—H16119.9
C7—C8—H8120.4
C3—N1—N2—C10.13 (14)C10—O—C7—C85.6 (2)
C4—N1—N2—C1−179.13 (11)C5—C6—C7—O178.30 (14)
N1—N2—C1—C20.31 (15)C5—C6—C7—C8−1.9 (2)
N1—N2—C1—C11179.87 (11)O—C7—C8—C9179.71 (14)
N2—C1—C2—C3−0.62 (17)C6—C7—C8—C9−0.1 (2)
C11—C1—C2—C3179.85 (13)N1—C4—C9—C8176.33 (13)
N2—N1—C3—N3176.99 (14)C5—C4—C9—C8−1.6 (2)
N2—N1—C3—C2−0.51 (16)C7—C8—C9—C41.8 (2)
C4—N1—C3—N3−3.9 (2)N2—C1—C11—C1229.1 (2)
C4—N1—C3—C2178.65 (12)N2—C1—C11—C16−151.79 (14)
C1—C2—C3—N10.65 (16)C2—C1—C11—C12−151.35 (15)
C1—C2—C3—N3−176.62 (16)C2—C1—C11—C1627.7 (2)
N2—N1—C4—C5141.21 (14)C1—C11—C12—C13179.32 (14)
N2—N1—C4—C9−36.72 (18)C16—C11—C12—C130.3 (2)
C3—N1—C4—C5−37.9 (2)C11—C12—C13—C140.0 (3)
C3—N1—C4—C9144.17 (15)C12—C13—C14—C15−0.2 (3)
N1—C4—C5—C6−178.27 (13)C13—C14—C15—C160.1 (3)
C9—C4—C5—C6−0.3 (2)C14—C15—C16—C110.1 (3)
C4—C5—C6—C72.1 (2)C1—C11—C16—C15−179.39 (15)
C10—O—C7—C6−174.60 (16)C12—C11—C16—C15−0.3 (2)
D—H···AD—HH···AD···AD—H···A
N3—H3NA···N2i0.89 (2)2.37 (2)3.228 (2)162.5 (16)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3NA⋯N2i0.89 (2)2.37 (2)3.228 (2)162.5 (16)

Symmetry code: (i) .

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