| Literature DB >> 21583972 |
Isuru R Kumarasinghe1, Victor J Hruby, Gary S Nichol.
Abstract
The synthesis of the title compound, C(16)H(15)N(3)O, is regiospecific and single-crystal X-ray diffraction provides the only means of unambiguous structural analysis, with the benzene ring bonded to the imine C atom. The phenyl ring and the essentially planar (r.m.s. deviation 0.0354 Å) methoxy-benzene group are rotated by 29.41 (5) and 37.01 (5)°, respectively, from the central pyrazole ring. An inter-molecular N-H⋯N hydrogen bond links symmetry-related mol-ecules into a C(5) chain, which runs parallel to the b axis.Entities:
Year: 2009 PMID: 21583972 PMCID: PMC2977835 DOI: 10.1107/S1600536809015463
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H15N3O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 2475 reflections |
| θ = 2.7–28.6° | |
| µ = 0.09 mm−1 | |
| Plate, colourless | |
| 0.35 × 0.35 × 0.05 mm |
| Bruker Kappa APEXII diffractometer | 2256 reflections with |
| Radiation source: sealed tube | |
| graphite | θmax = 28.3°, θmin = 2.0° |
| φ and ω scans | |
| 11632 measured reflections | |
| 3019 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3019 reflections | (Δ/σ)max = 0.001 |
| 190 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.15 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O | 0.37170 (8) | 0.3584 (2) | 0.56552 (3) | 0.0537 (3) | |
| N1 | 0.38199 (8) | 0.10523 (19) | 0.75399 (4) | 0.0327 (3) | |
| N2 | 0.37654 (8) | 0.2595 (2) | 0.78830 (4) | 0.0357 (3) | |
| N3 | 0.39632 (11) | −0.2693 (2) | 0.74725 (6) | 0.0506 (4) | |
| H3NA | 0.3945 (12) | −0.386 (3) | 0.7646 (6) | 0.057 (6)* | |
| H3NB | 0.3982 (15) | −0.264 (4) | 0.7192 (8) | 0.083 (8)* | |
| C1 | 0.38472 (9) | 0.1542 (2) | 0.82878 (5) | 0.0334 (3) | |
| C2 | 0.39560 (10) | −0.0607 (3) | 0.82140 (5) | 0.0401 (4) | |
| H2 | 0.4031 | −0.1639 | 0.8444 | 0.048* | |
| C3 | 0.39302 (9) | −0.0890 (2) | 0.77325 (5) | 0.0359 (3) | |
| C4 | 0.37681 (9) | 0.1656 (2) | 0.70563 (4) | 0.0317 (3) | |
| C5 | 0.42957 (9) | 0.0699 (3) | 0.67137 (5) | 0.0391 (4) | |
| H5 | 0.4681 | −0.0386 | 0.6797 | 0.047* | |
| C6 | 0.42468 (10) | 0.1361 (3) | 0.62484 (5) | 0.0414 (4) | |
| H6 | 0.4586 | 0.0688 | 0.6018 | 0.050* | |
| C7 | 0.36981 (9) | 0.3015 (3) | 0.61242 (5) | 0.0379 (4) | |
| C8 | 0.31728 (9) | 0.3982 (2) | 0.64632 (5) | 0.0374 (3) | |
| H8 | 0.2803 | 0.5097 | 0.6381 | 0.045* | |
| C9 | 0.32044 (9) | 0.3268 (2) | 0.69274 (4) | 0.0347 (3) | |
| H9 | 0.2840 | 0.3887 | 0.7155 | 0.042* | |
| C10 | 0.32253 (15) | 0.5386 (4) | 0.55199 (6) | 0.0687 (6) | |
| H10A | 0.2604 | 0.5175 | 0.5591 | 0.103* | |
| H10B | 0.3296 | 0.5620 | 0.5186 | 0.103* | |
| H10C | 0.3442 | 0.6587 | 0.5691 | 0.103* | |
| C11 | 0.38252 (9) | 0.2644 (3) | 0.87483 (5) | 0.0354 (3) | |
| C12 | 0.33514 (10) | 0.4489 (3) | 0.88095 (5) | 0.0421 (4) | |
| H12 | 0.3041 | 0.5073 | 0.8556 | 0.050* | |
| C13 | 0.33371 (12) | 0.5473 (3) | 0.92489 (6) | 0.0534 (4) | |
| H13 | 0.3018 | 0.6714 | 0.9289 | 0.064* | |
| C14 | 0.37933 (12) | 0.4620 (3) | 0.96249 (6) | 0.0567 (5) | |
| H14 | 0.3784 | 0.5285 | 0.9918 | 0.068* | |
| C15 | 0.42634 (12) | 0.2785 (3) | 0.95670 (5) | 0.0550 (5) | |
| H15 | 0.4571 | 0.2207 | 0.9822 | 0.066* | |
| C16 | 0.42822 (11) | 0.1790 (3) | 0.91320 (5) | 0.0448 (4) | |
| H16 | 0.4601 | 0.0546 | 0.9096 | 0.054* |
| O | 0.0695 (8) | 0.0595 (9) | 0.0320 (5) | 0.0105 (6) | 0.0029 (5) | 0.0047 (5) |
| N1 | 0.0413 (6) | 0.0248 (8) | 0.0320 (5) | −0.0005 (5) | −0.0026 (4) | −0.0017 (4) |
| N2 | 0.0451 (7) | 0.0306 (8) | 0.0315 (5) | −0.0003 (5) | −0.0004 (5) | −0.0021 (5) |
| N3 | 0.0764 (10) | 0.0275 (9) | 0.0478 (8) | −0.0004 (7) | −0.0067 (7) | −0.0014 (7) |
| C1 | 0.0349 (7) | 0.0311 (9) | 0.0342 (6) | −0.0036 (6) | 0.0004 (5) | 0.0033 (6) |
| C2 | 0.0495 (8) | 0.0308 (10) | 0.0399 (7) | −0.0004 (7) | −0.0037 (6) | 0.0071 (6) |
| C3 | 0.0386 (7) | 0.0260 (9) | 0.0430 (7) | −0.0005 (6) | −0.0046 (5) | 0.0011 (6) |
| C4 | 0.0347 (7) | 0.0290 (9) | 0.0315 (6) | −0.0037 (6) | −0.0026 (5) | 0.0003 (5) |
| C5 | 0.0389 (7) | 0.0379 (10) | 0.0406 (7) | 0.0068 (6) | −0.0009 (6) | −0.0013 (6) |
| C6 | 0.0425 (8) | 0.0448 (11) | 0.0370 (7) | 0.0064 (7) | 0.0045 (6) | −0.0061 (6) |
| C7 | 0.0418 (7) | 0.0405 (10) | 0.0315 (6) | −0.0032 (6) | −0.0007 (5) | −0.0002 (6) |
| C8 | 0.0427 (8) | 0.0324 (9) | 0.0370 (7) | 0.0053 (6) | −0.0031 (5) | −0.0006 (6) |
| C9 | 0.0373 (7) | 0.0327 (9) | 0.0342 (6) | 0.0017 (6) | 0.0012 (5) | −0.0048 (6) |
| C10 | 0.0913 (15) | 0.0668 (16) | 0.0481 (10) | 0.0174 (12) | −0.0012 (9) | 0.0197 (9) |
| C11 | 0.0380 (7) | 0.0355 (10) | 0.0328 (6) | −0.0062 (6) | 0.0033 (5) | 0.0032 (6) |
| C12 | 0.0463 (8) | 0.0394 (10) | 0.0406 (7) | 0.0001 (7) | 0.0015 (6) | 0.0012 (7) |
| C13 | 0.0587 (10) | 0.0483 (12) | 0.0532 (9) | 0.0046 (8) | 0.0083 (7) | −0.0089 (8) |
| C14 | 0.0659 (11) | 0.0678 (15) | 0.0363 (8) | −0.0051 (10) | 0.0071 (7) | −0.0104 (8) |
| C15 | 0.0639 (11) | 0.0683 (15) | 0.0329 (7) | −0.0030 (9) | −0.0023 (7) | 0.0052 (8) |
| C16 | 0.0525 (9) | 0.0436 (11) | 0.0382 (7) | 0.0026 (8) | 0.0003 (6) | 0.0046 (7) |
| O—C7 | 1.3736 (16) | C7—C8 | 1.3834 (19) |
| O—C10 | 1.415 (2) | C8—H8 | 0.9300 |
| N1—N2 | 1.3820 (16) | C8—C9 | 1.3885 (18) |
| N1—C3 | 1.3607 (19) | C9—H9 | 0.9300 |
| N1—C4 | 1.4211 (16) | C10—H10A | 0.9600 |
| N2—C1 | 1.3307 (17) | C10—H10B | 0.9600 |
| N3—H3NA | 0.89 (2) | C10—H10C | 0.9600 |
| N3—H3NB | 0.79 (2) | C11—C12 | 1.382 (2) |
| N3—C3 | 1.363 (2) | C11—C16 | 1.392 (2) |
| C1—C2 | 1.393 (2) | C12—H12 | 0.9300 |
| C1—C11 | 1.4782 (19) | C12—C13 | 1.391 (2) |
| C2—H2 | 0.9300 | C13—H13 | 0.9300 |
| C2—C3 | 1.373 (2) | C13—C14 | 1.374 (2) |
| C4—C5 | 1.3896 (19) | C14—H14 | 0.9300 |
| C4—C9 | 1.377 (2) | C14—C15 | 1.373 (3) |
| C5—H5 | 0.9300 | C15—H15 | 0.9300 |
| C5—C6 | 1.3823 (19) | C15—C16 | 1.383 (2) |
| C6—H6 | 0.9300 | C16—H16 | 0.9300 |
| C6—C7 | 1.380 (2) | ||
| C7—O—C10 | 117.63 (13) | C7—C8—C9 | 119.26 (14) |
| N2—N1—C3 | 111.85 (11) | H8—C8—C9 | 120.4 |
| N2—N1—C4 | 118.61 (12) | C4—C9—C8 | 120.95 (13) |
| C3—N1—C4 | 129.54 (12) | C4—C9—H9 | 119.5 |
| N1—N2—C1 | 103.86 (12) | C8—C9—H9 | 119.5 |
| H3NA—N3—H3NB | 126 (2) | O—C10—H10A | 109.5 |
| H3NA—N3—C3 | 113.9 (12) | O—C10—H10B | 109.5 |
| H3NB—N3—C3 | 120.3 (18) | O—C10—H10C | 109.5 |
| N2—C1—C2 | 112.11 (12) | H10A—C10—H10B | 109.5 |
| N2—C1—C11 | 121.01 (14) | H10A—C10—H10C | 109.5 |
| C2—C1—C11 | 126.87 (13) | H10B—C10—H10C | 109.5 |
| C1—C2—H2 | 127.1 | C1—C11—C12 | 121.62 (13) |
| C1—C2—C3 | 105.89 (13) | C1—C11—C16 | 119.26 (14) |
| H2—C2—C3 | 127.1 | C12—C11—C16 | 119.10 (14) |
| N1—C3—N3 | 123.63 (13) | C11—C12—H12 | 119.9 |
| N1—C3—C2 | 106.28 (13) | C11—C12—C13 | 120.14 (15) |
| N3—C3—C2 | 130.03 (15) | H12—C12—C13 | 119.9 |
| N1—C4—C5 | 121.32 (13) | C12—C13—H13 | 119.9 |
| N1—C4—C9 | 119.27 (12) | C12—C13—C14 | 120.28 (17) |
| C5—C4—C9 | 119.38 (12) | H13—C13—C14 | 119.9 |
| C4—C5—H5 | 120.1 | C13—C14—H14 | 120.1 |
| C4—C5—C6 | 119.90 (14) | C13—C14—C15 | 119.89 (15) |
| H5—C5—C6 | 120.1 | H14—C14—C15 | 120.1 |
| C5—C6—H6 | 119.8 | C14—C15—H15 | 119.8 |
| C5—C6—C7 | 120.38 (13) | C14—C15—C16 | 120.38 (15) |
| H6—C6—C7 | 119.8 | H15—C15—C16 | 119.8 |
| O—C7—C6 | 115.73 (13) | C11—C16—C15 | 120.20 (16) |
| O—C7—C8 | 124.18 (14) | C11—C16—H16 | 119.9 |
| C6—C7—C8 | 120.09 (13) | C15—C16—H16 | 119.9 |
| C7—C8—H8 | 120.4 | ||
| C3—N1—N2—C1 | 0.13 (14) | C10—O—C7—C8 | 5.6 (2) |
| C4—N1—N2—C1 | −179.13 (11) | C5—C6—C7—O | 178.30 (14) |
| N1—N2—C1—C2 | 0.31 (15) | C5—C6—C7—C8 | −1.9 (2) |
| N1—N2—C1—C11 | 179.87 (11) | O—C7—C8—C9 | 179.71 (14) |
| N2—C1—C2—C3 | −0.62 (17) | C6—C7—C8—C9 | −0.1 (2) |
| C11—C1—C2—C3 | 179.85 (13) | N1—C4—C9—C8 | 176.33 (13) |
| N2—N1—C3—N3 | 176.99 (14) | C5—C4—C9—C8 | −1.6 (2) |
| N2—N1—C3—C2 | −0.51 (16) | C7—C8—C9—C4 | 1.8 (2) |
| C4—N1—C3—N3 | −3.9 (2) | N2—C1—C11—C12 | 29.1 (2) |
| C4—N1—C3—C2 | 178.65 (12) | N2—C1—C11—C16 | −151.79 (14) |
| C1—C2—C3—N1 | 0.65 (16) | C2—C1—C11—C12 | −151.35 (15) |
| C1—C2—C3—N3 | −176.62 (16) | C2—C1—C11—C16 | 27.7 (2) |
| N2—N1—C4—C5 | 141.21 (14) | C1—C11—C12—C13 | 179.32 (14) |
| N2—N1—C4—C9 | −36.72 (18) | C16—C11—C12—C13 | 0.3 (2) |
| C3—N1—C4—C5 | −37.9 (2) | C11—C12—C13—C14 | 0.0 (3) |
| C3—N1—C4—C9 | 144.17 (15) | C12—C13—C14—C15 | −0.2 (3) |
| N1—C4—C5—C6 | −178.27 (13) | C13—C14—C15—C16 | 0.1 (3) |
| C9—C4—C5—C6 | −0.3 (2) | C14—C15—C16—C11 | 0.1 (3) |
| C4—C5—C6—C7 | 2.1 (2) | C1—C11—C16—C15 | −179.39 (15) |
| C10—O—C7—C6 | −174.60 (16) | C12—C11—C16—C15 | −0.3 (2) |
| H··· | ||||
| N3—H3NA···N2i | 0.89 (2) | 2.37 (2) | 3.228 (2) | 162.5 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3 | 0.89 (2) | 2.37 (2) | 3.228 (2) | 162.5 (16) |
Symmetry code: (i) .