| Literature DB >> 21583561 |
Dong Dong Li1, Gui Hong Tang, Xiang Chao Zeng, Gang Huang, Xing Yan Xu.
Abstract
The title compound, C(10)H(14)N(2)O(3)·H(2)O, was synthesized by alkyl-ation of methyl 3-(1H-pyrrole-2-carboxamido)-propion-ate with ethyl bromide, followed by saponification and acidification. In the crystal structure, inter-molecular O-H⋯O and N-H⋯O hydrogen bonds link the mol-ecules, forming layers parallel to the ac plane.Entities:
Year: 2009 PMID: 21583561 PMCID: PMC2977448 DOI: 10.1107/S1600536809026749
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H14N2O3·H2O | |
| Monoclinic, | Melting point: 320 K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 2595 reflections | |
| θ = 2.6–28.0° | |
| µ = 0.10 mm−1 | |
| β = 106.392 (4)° | |
| Plate, pale yellow | |
| 0.47 × 0.44 × 0.15 mm |
| Bruker SMART 1K CCD area-detector diffractometer | 2215 independent reflections |
| Radiation source: fine-focus sealed tube | 1772 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.0°, θmin = 1.3° |
| Absorption correction: multi-scan ( | |
| 5260 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2215 reflections | (Δ/σ)max = 0.001 |
| 155 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O2 | −0.2174 (3) | 0.48016 (5) | 0.1312 (3) | 0.0377 (4) | |
| O1 | 0.4540 (3) | 0.36651 (5) | 0.1693 (2) | 0.0350 (4) | |
| N1 | 0.9087 (4) | 0.32234 (6) | 0.4136 (3) | 0.0281 (5) | |
| O3 | 0.0271 (4) | 0.53444 (5) | 0.2775 (3) | 0.0370 (5) | |
| H3 | −0.1105 | 0.5479 | 0.2213 | 0.055* | |
| N2 | 0.3901 (4) | 0.39704 (6) | 0.4423 (3) | 0.0307 (5) | |
| H2 | 0.4458 | 0.3994 | 0.5723 | 0.037* | |
| C4 | 0.7462 (4) | 0.34863 (6) | 0.4836 (3) | 0.0254 (5) | |
| C6 | 0.1614 (4) | 0.42138 (7) | 0.3356 (3) | 0.0295 (5) | |
| H6A | 0.0205 | 0.4183 | 0.4023 | 0.035* | |
| H6B | 0.0936 | 0.4103 | 0.1990 | 0.035* | |
| C5 | 0.5200 (4) | 0.37122 (6) | 0.3528 (3) | 0.0250 (5) | |
| C7 | 0.2283 (4) | 0.46754 (7) | 0.3265 (3) | 0.0277 (5) | |
| H7A | 0.3132 | 0.4778 | 0.4627 | 0.033* | |
| H7B | 0.3567 | 0.4707 | 0.2485 | 0.033* | |
| C8 | −0.0108 (5) | 0.49402 (7) | 0.2343 (3) | 0.0267 (5) | |
| C3 | 0.8518 (5) | 0.35132 (7) | 0.6881 (3) | 0.0319 (6) | |
| H3A | 0.7824 | 0.3673 | 0.7761 | 0.038* | |
| C9 | 0.8797 (5) | 0.30933 (8) | 0.2082 (3) | 0.0361 (6) | |
| H9A | 1.0516 | 0.2987 | 0.1980 | 0.043* | |
| H9B | 0.8319 | 0.3342 | 0.1206 | 0.043* | |
| C1 | 1.1074 (5) | 0.30880 (8) | 0.5705 (4) | 0.0350 (6) | |
| H1 | 1.2446 | 0.2901 | 0.5629 | 0.042* | |
| C10 | 0.6725 (6) | 0.27552 (8) | 0.1358 (4) | 0.0407 (6) | |
| H10A | 0.7317 | 0.2493 | 0.2084 | 0.061* | |
| H10B | 0.6457 | 0.2708 | −0.0065 | 0.061* | |
| H10C | 0.5060 | 0.2846 | 0.1585 | 0.061* | |
| C2 | 1.0782 (5) | 0.32635 (8) | 0.7411 (4) | 0.0366 (6) | |
| H2A | 1.1912 | 0.3223 | 0.8715 | 0.044* | |
| O4 | 0.5768 (4) | 0.57638 (6) | 0.1280 (3) | 0.0343 (4) | |
| H4A | 0.584 (6) | 0.5980 (10) | 0.034 (5) | 0.057 (9)* | |
| H4B | 0.465 (7) | 0.5596 (10) | 0.074 (5) | 0.051 (9)* |
| O2 | 0.0288 (9) | 0.0372 (9) | 0.0415 (10) | 0.0021 (7) | 0.0009 (8) | −0.0031 (7) |
| O1 | 0.0450 (10) | 0.0355 (9) | 0.0196 (8) | 0.0068 (8) | 0.0013 (7) | −0.0001 (6) |
| N1 | 0.0253 (10) | 0.0322 (10) | 0.0270 (10) | −0.0003 (8) | 0.0077 (8) | 0.0016 (7) |
| O3 | 0.0413 (11) | 0.0273 (8) | 0.0404 (10) | 0.0022 (7) | 0.0087 (8) | −0.0014 (7) |
| N2 | 0.0350 (11) | 0.0324 (10) | 0.0220 (9) | 0.0048 (8) | 0.0038 (8) | 0.0004 (8) |
| C4 | 0.0285 (12) | 0.0239 (10) | 0.0227 (11) | −0.0027 (9) | 0.0057 (9) | 0.0011 (8) |
| C6 | 0.0255 (12) | 0.0301 (12) | 0.0309 (12) | 0.0011 (9) | 0.0048 (9) | −0.0013 (9) |
| C5 | 0.0290 (11) | 0.0225 (10) | 0.0222 (11) | −0.0043 (9) | 0.0049 (9) | 0.0010 (8) |
| C7 | 0.0255 (11) | 0.0311 (12) | 0.0265 (11) | −0.0032 (9) | 0.0076 (9) | −0.0026 (9) |
| C8 | 0.0311 (12) | 0.0292 (11) | 0.0219 (10) | −0.0009 (9) | 0.0110 (9) | −0.0003 (8) |
| C3 | 0.0376 (13) | 0.0312 (12) | 0.0235 (11) | −0.0002 (10) | 0.0029 (10) | 0.0005 (9) |
| C9 | 0.0368 (14) | 0.0459 (14) | 0.0306 (12) | 0.0049 (11) | 0.0179 (11) | 0.0016 (10) |
| C1 | 0.0258 (12) | 0.0371 (13) | 0.0393 (13) | 0.0020 (10) | 0.0044 (10) | 0.0052 (10) |
| C10 | 0.0506 (16) | 0.0392 (14) | 0.0304 (13) | 0.0054 (12) | 0.0082 (12) | −0.0061 (10) |
| C2 | 0.0341 (13) | 0.0394 (14) | 0.0282 (12) | −0.0038 (11) | −0.0044 (10) | 0.0039 (10) |
| O4 | 0.0431 (11) | 0.0282 (9) | 0.0289 (9) | −0.0011 (8) | 0.0058 (8) | 0.0009 (7) |
| O2—C8 | 1.210 (3) | C7—H7A | 0.9900 |
| O1—C5 | 1.245 (3) | C7—H7B | 0.9900 |
| N1—C1 | 1.359 (3) | C3—C2 | 1.395 (4) |
| N1—C4 | 1.384 (3) | C3—H3A | 0.9500 |
| N1—C9 | 1.466 (3) | C9—C10 | 1.516 (4) |
| O3—C8 | 1.323 (3) | C9—H9A | 0.9900 |
| O3—H3 | 0.8400 | C9—H9B | 0.9900 |
| N2—C5 | 1.335 (3) | C1—C2 | 1.370 (4) |
| N2—C6 | 1.452 (3) | C1—H1 | 0.9500 |
| N2—H2 | 0.8800 | C10—H10A | 0.9800 |
| C4—C3 | 1.388 (3) | C10—H10B | 0.9800 |
| C4—C5 | 1.473 (3) | C10—H10C | 0.9800 |
| C6—C7 | 1.515 (3) | C2—H2A | 0.9500 |
| C6—H6A | 0.9900 | O4—H4A | 0.96 (3) |
| C6—H6B | 0.9900 | O4—H4B | 0.81 (3) |
| C7—C8 | 1.504 (3) | ||
| C1—N1—C4 | 108.54 (19) | O2—C8—O3 | 123.0 (2) |
| C1—N1—C9 | 123.4 (2) | O2—C8—C7 | 124.0 (2) |
| C4—N1—C9 | 128.08 (19) | O3—C8—C7 | 113.00 (19) |
| C8—O3—H3 | 109.5 | C4—C3—C2 | 107.7 (2) |
| C5—N2—C6 | 123.23 (18) | C4—C3—H3A | 126.1 |
| C5—N2—H2 | 118.4 | C2—C3—H3A | 126.1 |
| C6—N2—H2 | 118.4 | N1—C9—C10 | 113.3 (2) |
| N1—C4—C3 | 107.2 (2) | N1—C9—H9A | 108.9 |
| N1—C4—C5 | 123.25 (19) | C10—C9—H9A | 108.9 |
| C3—C4—C5 | 129.3 (2) | N1—C9—H9B | 108.9 |
| N2—C6—C7 | 111.60 (19) | C10—C9—H9B | 108.9 |
| N2—C6—H6A | 109.3 | H9A—C9—H9B | 107.7 |
| C7—C6—H6A | 109.3 | N1—C1—C2 | 109.2 (2) |
| N2—C6—H6B | 109.3 | N1—C1—H1 | 125.4 |
| C7—C6—H6B | 109.3 | C2—C1—H1 | 125.4 |
| H6A—C6—H6B | 108.0 | C9—C10—H10A | 109.5 |
| O1—C5—N2 | 122.0 (2) | C9—C10—H10B | 109.5 |
| O1—C5—C4 | 121.9 (2) | H10A—C10—H10B | 109.5 |
| N2—C5—C4 | 116.13 (18) | C9—C10—H10C | 109.5 |
| C8—C7—C6 | 112.51 (19) | H10A—C10—H10C | 109.5 |
| C8—C7—H7A | 109.1 | H10B—C10—H10C | 109.5 |
| C6—C7—H7A | 109.1 | C1—C2—C3 | 107.3 (2) |
| C8—C7—H7B | 109.1 | C1—C2—H2A | 126.3 |
| C6—C7—H7B | 109.1 | C3—C2—H2A | 126.3 |
| H7A—C7—H7B | 107.8 | H4A—O4—H4B | 108 (3) |
| C1—N1—C4—C3 | 0.7 (2) | N2—C6—C7—C8 | −174.39 (18) |
| C9—N1—C4—C3 | 179.4 (2) | C6—C7—C8—O2 | −19.0 (3) |
| C1—N1—C4—C5 | 175.90 (19) | C6—C7—C8—O3 | 161.00 (19) |
| C9—N1—C4—C5 | −5.3 (3) | N1—C4—C3—C2 | −0.3 (3) |
| C5—N2—C6—C7 | −106.2 (2) | C5—C4—C3—C2 | −175.1 (2) |
| C6—N2—C5—O1 | 0.6 (3) | C1—N1—C9—C10 | 101.2 (3) |
| C6—N2—C5—C4 | −179.44 (19) | C4—N1—C9—C10 | −77.4 (3) |
| N1—C4—C5—O1 | 3.2 (3) | C4—N1—C1—C2 | −0.8 (3) |
| C3—C4—C5—O1 | 177.3 (2) | C9—N1—C1—C2 | −179.6 (2) |
| N1—C4—C5—N2 | −176.8 (2) | N1—C1—C2—C3 | 0.6 (3) |
| C3—C4—C5—N2 | −2.6 (3) | C4—C3—C2—C1 | −0.2 (3) |
| H··· | ||||
| O3—H3···O4i | 0.84 | 1.83 | 2.669 (3) | 173 |
| N2—H2···O4ii | 0.88 | 2.28 | 3.091 (3) | 154 |
| O4—H4A···O1iii | 0.96 (3) | 1.79 (3) | 2.737 (2) | 170 (3) |
| O4—H4B···O2iv | 0.81 (3) | 2.08 (4) | 2.863 (3) | 164 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯O4i | 0.84 | 1.83 | 2.669 (3) | 173 |
| N2—H2⋯O4ii | 0.88 | 2.28 | 3.091 (3) | 154 |
| O4—H4 | 0.96 (3) | 1.79 (3) | 2.737 (2) | 170 (3) |
| O4—H4 | 0.81 (3) | 2.08 (4) | 2.863 (3) | 164 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .