| Literature DB >> 21583429 |
Bing-Yu Zhang1, Jing-Jing Nie, Duan-Jun Xu.
Abstract
In the mol-ecule of the title Co(II) complex, [Co(C(6)H(4)NO(3))(2)(C(3)H(4)N(2))(2)], the Co(II) atom is located on a twofold rotation axis and chelated by two oxidopyridiniumcarboxyl-ate anions and further cis-coordinated by two imidazole ligands in a distorted octa-hedral geometry. The shorter C-O bond distance of 1.260 (2) Å suggests electron delocalization between the oxido group and the pyridinium ring. The uncoordinated carboxyl-ate O atom links with the imidazole and pyridinium rings of adjacent mol-ecules via N-H⋯O hydrogen bonding. Weak C-H⋯O hydrogen bonding is also present in the crystal structure.Entities:
Year: 2009 PMID: 21583429 PMCID: PMC2977295 DOI: 10.1107/S1600536809028694
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C6H4NO3)2(C3H4N2)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 4226 reflections |
| θ = 2.5–25.2° | |
| µ = 0.91 mm−1 | |
| β = 111.407 (4)° | Block, pink |
| 0.40 × 0.30 × 0.26 mm | |
| Rigaku R-AXIS RAPID IP diffractometer | 1824 independent reflections |
| Radiation source: fine-focus sealed tube | 1527 reflections with |
| graphite | |
| Detector resolution: 10.00 pixels mm-1 | θmax = 25.4°, θmin = 2.4° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 10627 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1824 reflections | (Δ/σ)max < 0.001 |
| 141 parameters | Δρmax = 0.24 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co | 0.5000 | 0.24771 (3) | 0.2500 | 0.02958 (13) | |
| N1 | 0.61270 (11) | −0.12644 (16) | 0.30331 (13) | 0.0369 (4) | |
| H1 | 0.6138 | −0.1391 | 0.2376 | 0.044* | |
| N2 | 0.58362 (11) | 0.39282 (16) | 0.22623 (13) | 0.0348 (4) | |
| N3 | 0.62322 (13) | 0.56271 (17) | 0.14899 (16) | 0.0468 (5) | |
| H3 | 0.6198 | 0.6308 | 0.1070 | 0.056* | |
| O1 | 0.56130 (10) | 0.24739 (13) | 0.42230 (11) | 0.0392 (4) | |
| O2 | 0.62213 (10) | 0.16732 (14) | 0.59300 (10) | 0.0410 (4) | |
| O3 | 0.58952 (9) | 0.09062 (13) | 0.25972 (10) | 0.0352 (3) | |
| C1 | 0.59989 (12) | 0.00073 (18) | 0.33196 (15) | 0.0293 (4) | |
| C2 | 0.60117 (12) | 0.01700 (18) | 0.44393 (15) | 0.0288 (4) | |
| C3 | 0.61152 (14) | −0.0923 (2) | 0.51100 (17) | 0.0375 (5) | |
| H3A | 0.6115 | −0.0814 | 0.5830 | 0.045* | |
| C4 | 0.62211 (16) | −0.2203 (2) | 0.47472 (18) | 0.0454 (6) | |
| H4 | 0.6278 | −0.2938 | 0.5209 | 0.055* | |
| C5 | 0.62375 (16) | −0.2340 (2) | 0.37099 (19) | 0.0449 (6) | |
| H5 | 0.6325 | −0.3175 | 0.3457 | 0.054* | |
| C6 | 0.59387 (12) | 0.15307 (19) | 0.48875 (15) | 0.0299 (4) | |
| C7 | 0.55679 (15) | 0.4904 (2) | 0.15344 (18) | 0.0396 (5) | |
| H7 | 0.4990 | 0.5071 | 0.1105 | 0.048* | |
| C8 | 0.67219 (15) | 0.4046 (2) | 0.27010 (19) | 0.0458 (6) | |
| H8 | 0.7094 | 0.3488 | 0.3242 | 0.055* | |
| C9 | 0.69703 (16) | 0.5089 (2) | 0.2231 (2) | 0.0510 (6) | |
| H9 | 0.7533 | 0.5381 | 0.2383 | 0.061* |
| Co | 0.0402 (2) | 0.02722 (19) | 0.0222 (2) | 0.000 | 0.01241 (16) | 0.000 |
| N1 | 0.0554 (12) | 0.0342 (9) | 0.0257 (9) | 0.0042 (8) | 0.0204 (8) | −0.0020 (7) |
| N2 | 0.0400 (11) | 0.0327 (9) | 0.0318 (9) | 0.0006 (8) | 0.0132 (8) | 0.0052 (7) |
| N3 | 0.0641 (14) | 0.0341 (10) | 0.0528 (12) | −0.0039 (9) | 0.0340 (11) | 0.0065 (9) |
| O1 | 0.0589 (10) | 0.0309 (7) | 0.0245 (7) | 0.0071 (7) | 0.0115 (7) | −0.0005 (6) |
| O2 | 0.0612 (10) | 0.0410 (8) | 0.0201 (7) | 0.0046 (7) | 0.0142 (7) | −0.0032 (6) |
| O3 | 0.0529 (9) | 0.0334 (7) | 0.0254 (7) | 0.0071 (6) | 0.0214 (7) | 0.0040 (6) |
| C1 | 0.0330 (11) | 0.0313 (10) | 0.0254 (10) | 0.0008 (8) | 0.0129 (8) | −0.0023 (8) |
| C2 | 0.0332 (11) | 0.0319 (10) | 0.0227 (10) | 0.0011 (8) | 0.0118 (8) | −0.0005 (8) |
| C3 | 0.0507 (14) | 0.0394 (11) | 0.0271 (10) | 0.0019 (10) | 0.0196 (10) | 0.0012 (9) |
| C4 | 0.0715 (17) | 0.0337 (11) | 0.0357 (12) | 0.0057 (11) | 0.0250 (12) | 0.0072 (9) |
| C5 | 0.0686 (16) | 0.0295 (11) | 0.0415 (13) | 0.0051 (10) | 0.0259 (12) | 0.0002 (9) |
| C6 | 0.0332 (11) | 0.0354 (10) | 0.0243 (10) | −0.0003 (9) | 0.0142 (8) | −0.0014 (8) |
| C7 | 0.0446 (13) | 0.0367 (11) | 0.0375 (12) | 0.0002 (10) | 0.0149 (10) | 0.0041 (9) |
| C8 | 0.0411 (14) | 0.0475 (13) | 0.0471 (14) | 0.0035 (10) | 0.0141 (11) | 0.0018 (10) |
| C9 | 0.0435 (15) | 0.0493 (14) | 0.0666 (17) | −0.0068 (11) | 0.0278 (13) | −0.0092 (12) |
| Co—O1i | 2.0684 (13) | O2—C6 | 1.253 (2) |
| Co—O1 | 2.0684 (13) | O3—C1 | 1.260 (2) |
| Co—O3i | 2.1402 (13) | C1—C2 | 1.438 (3) |
| Co—O3 | 2.1402 (13) | C2—C3 | 1.367 (3) |
| Co—N2 | 2.1107 (16) | C2—C6 | 1.506 (3) |
| Co—N2i | 2.1107 (16) | C3—C4 | 1.401 (3) |
| N1—C5 | 1.357 (3) | C3—H3A | 0.9300 |
| N1—C1 | 1.368 (2) | C4—C5 | 1.348 (3) |
| N1—H1 | 0.8600 | C4—H4 | 0.9300 |
| N2—C7 | 1.315 (2) | C5—H5 | 0.9300 |
| N2—C8 | 1.374 (3) | C7—H7 | 0.9300 |
| N3—C7 | 1.339 (3) | C8—C9 | 1.347 (3) |
| N3—C9 | 1.359 (3) | C8—H8 | 0.9300 |
| N3—H3 | 0.8600 | C9—H9 | 0.9300 |
| O1—C6 | 1.258 (2) | ||
| O1i—Co—O1 | 179.82 (7) | O3—C1—C2 | 126.95 (17) |
| O1i—Co—N2 | 86.54 (6) | N1—C1—C2 | 115.31 (16) |
| O1—Co—N2 | 93.59 (6) | C3—C2—C1 | 119.33 (17) |
| O1i—Co—N2i | 93.59 (6) | C3—C2—C6 | 119.94 (16) |
| O1—Co—N2i | 86.54 (6) | C1—C2—C6 | 120.71 (16) |
| N2—Co—N2i | 92.57 (9) | C2—C3—C4 | 122.10 (18) |
| O1i—Co—O3i | 82.90 (5) | C2—C3—H3A | 119.0 |
| O1—Co—O3i | 96.97 (5) | C4—C3—H3A | 119.0 |
| N2—Co—O3i | 168.64 (5) | C5—C4—C3 | 118.14 (19) |
| N2i—Co—O3i | 92.26 (6) | C5—C4—H4 | 120.9 |
| O1i—Co—O3 | 96.97 (5) | C3—C4—H4 | 120.9 |
| O1—Co—O3 | 82.90 (5) | C4—C5—N1 | 120.26 (19) |
| N2—Co—O3 | 92.26 (6) | C4—C5—H5 | 119.9 |
| N2i—Co—O3 | 168.64 (5) | N1—C5—H5 | 119.9 |
| O3i—Co—O3 | 84.91 (8) | O2—C6—O1 | 122.54 (17) |
| C5—N1—C1 | 124.81 (17) | O2—C6—C2 | 117.41 (17) |
| C5—N1—H1 | 117.6 | O1—C6—C2 | 120.05 (16) |
| C1—N1—H1 | 117.6 | N2—C7—N3 | 111.4 (2) |
| C7—N2—C8 | 105.13 (18) | N2—C7—H7 | 124.3 |
| C7—N2—Co | 123.24 (15) | N3—C7—H7 | 124.3 |
| C8—N2—Co | 131.44 (14) | C9—C8—N2 | 109.9 (2) |
| C7—N3—C9 | 107.46 (18) | C9—C8—H8 | 125.1 |
| C7—N3—H3 | 126.3 | N2—C8—H8 | 125.1 |
| C9—N3—H3 | 126.3 | C8—C9—N3 | 106.1 (2) |
| C6—O1—Co | 130.35 (12) | C8—C9—H9 | 126.9 |
| C1—O3—Co | 118.52 (12) | N3—C9—H9 | 126.9 |
| O3—C1—N1 | 117.74 (16) |
| H··· | ||||
| N1—H1···O2ii | 0.86 | 1.93 | 2.789 (2) | 177 |
| N3—H3···O2iii | 0.86 | 2.04 | 2.806 (2) | 148 |
| C3—H3A···O3iv | 0.93 | 2.43 | 3.341 (3) | 168 |
Selected bond lengths (Å)
| Co—O1 | 2.0684 (13) |
| Co—O3 | 2.1402 (13) |
| Co—N2 | 2.1107 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O2i | 0.86 | 1.93 | 2.789 (2) | 177 |
| N3—H3⋯O2ii | 0.86 | 2.04 | 2.806 (2) | 148 |
| C3—H3 | 0.93 | 2.43 | 3.341 (3) | 168 |
Symmetry codes: (i) ; (ii) ; (iii) .