| Literature DB >> 21583420 |
Bing-Yu Zhang1, Jing-Jing Nie, Duan-Jun Xu.
Abstract
In the crystal structure of the title Ni(II) complex, [Ni(C(6)H(4)NO(3))(2)(C(3)H(4)N(2))(2)], the Ni(II) atom is located on a twofold rotation axis and is chelated by two oxidopyridiniumcarboxyl-ate anions and further cis-coordinated by two imidazole ligands in a distorted cis-N(2)O(4) octa-hedral geometry. The C-O bond distance of 1.2573 (19) Å found for the non-coordinating O atom of the carboxyl-ate group indicates significant delocalization of π-electron density over this residue. Similarly, the C-O bond distance of 1.260 (2) Å in the heteroaromatic ring indicates delocalization between the deprotonated hydr-oxy group and the pyridinium ring. The uncoordinated carboxyl-ate O atom links with the imidazole and pyridinium rings of adjacent mol-ecules via N-H⋯O and C-H⋯O hydrogen bonding, leading to a two-dimensional array parallel to (100).Entities:
Year: 2009 PMID: 21583420 PMCID: PMC2977237 DOI: 10.1107/S1600536809028347
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C6H4NO3)2(C3H4N2)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3268 reflections |
| θ = 2.5–25.0° | |
| µ = 1.04 mm−1 | |
| β = 111.203 (2)° | Block, green |
| 0.28 × 0.22 × 0.18 mm | |
| Rigaku R-AXIS RAPID IP diffractometer | 1934 independent reflections |
| Radiation source: fine-focus sealed tube | 1690 reflections with |
| graphite | |
| Detector resolution: 10.00 pixels mm-1 | θmax = 26.0°, θmin = 2.4° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 10787 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1934 reflections | (Δ/σ)max = 0.001 |
| 141 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ni | 0.5000 | 0.24819 (3) | 0.2500 | 0.02609 (11) | |
| N1 | 0.61183 (10) | −0.12600 (15) | 0.30054 (12) | 0.0340 (4) | |
| H1 | 0.6130 | −0.1389 | 0.2346 | 0.041* | |
| N2 | 0.58315 (9) | 0.39012 (14) | 0.22850 (12) | 0.0307 (3) | |
| N3 | 0.62487 (11) | 0.55962 (16) | 0.15138 (14) | 0.0413 (4) | |
| H3 | 0.6224 | 0.6275 | 0.1088 | 0.050* | |
| O1 | 0.55981 (9) | 0.25034 (11) | 0.42031 (10) | 0.0345 (3) | |
| O2 | 0.62229 (8) | 0.17047 (12) | 0.59099 (9) | 0.0370 (3) | |
| O3 | 0.58766 (8) | 0.09254 (12) | 0.25646 (9) | 0.0320 (3) | |
| C1 | 0.59865 (11) | 0.00219 (17) | 0.32922 (13) | 0.0269 (4) | |
| C2 | 0.60022 (10) | 0.01871 (17) | 0.44182 (13) | 0.0270 (4) | |
| C3 | 0.61083 (12) | −0.09161 (18) | 0.50917 (14) | 0.0347 (4) | |
| H3A | 0.6108 | −0.0806 | 0.5813 | 0.042* | |
| C4 | 0.62173 (15) | −0.22061 (19) | 0.47285 (16) | 0.0429 (5) | |
| H4 | 0.6278 | −0.2947 | 0.5192 | 0.051* | |
| C5 | 0.62318 (15) | −0.23420 (18) | 0.36860 (17) | 0.0418 (5) | |
| H5 | 0.6320 | −0.3184 | 0.3433 | 0.050* | |
| C6 | 0.59302 (11) | 0.15609 (17) | 0.48631 (13) | 0.0273 (4) | |
| C7 | 0.55757 (13) | 0.48832 (18) | 0.15514 (15) | 0.0362 (4) | |
| H7 | 0.5001 | 0.5059 | 0.1115 | 0.043* | |
| C8 | 0.67175 (12) | 0.4006 (2) | 0.27398 (16) | 0.0404 (4) | |
| H8 | 0.7082 | 0.3442 | 0.3287 | 0.049* | |
| C9 | 0.69804 (13) | 0.5053 (2) | 0.22712 (18) | 0.0456 (5) | |
| H9 | 0.7547 | 0.5343 | 0.2434 | 0.055* |
| Ni | 0.03550 (19) | 0.02420 (17) | 0.01909 (17) | 0.000 | 0.01048 (13) | 0.000 |
| N1 | 0.0520 (9) | 0.0317 (8) | 0.0228 (7) | 0.0040 (7) | 0.0192 (7) | −0.0015 (6) |
| N2 | 0.0348 (8) | 0.0290 (8) | 0.0276 (7) | −0.0003 (6) | 0.0106 (6) | 0.0026 (6) |
| N3 | 0.0577 (11) | 0.0309 (8) | 0.0428 (9) | −0.0040 (7) | 0.0272 (8) | 0.0049 (7) |
| O1 | 0.0514 (8) | 0.0281 (6) | 0.0213 (6) | 0.0057 (5) | 0.0098 (6) | 0.0002 (5) |
| O2 | 0.0551 (8) | 0.0371 (7) | 0.0175 (6) | 0.0040 (6) | 0.0117 (5) | −0.0025 (5) |
| O3 | 0.0475 (7) | 0.0306 (6) | 0.0229 (6) | 0.0056 (5) | 0.0190 (5) | 0.0040 (5) |
| C1 | 0.0297 (8) | 0.0290 (9) | 0.0234 (8) | 0.0004 (7) | 0.0114 (7) | −0.0011 (7) |
| C2 | 0.0313 (9) | 0.0301 (9) | 0.0207 (8) | 0.0008 (7) | 0.0109 (7) | −0.0010 (7) |
| C3 | 0.0479 (11) | 0.0357 (10) | 0.0230 (9) | 0.0020 (8) | 0.0156 (8) | 0.0016 (7) |
| C4 | 0.0682 (14) | 0.0303 (10) | 0.0339 (10) | 0.0057 (9) | 0.0229 (10) | 0.0069 (8) |
| C5 | 0.0647 (14) | 0.0268 (10) | 0.0370 (11) | 0.0057 (9) | 0.0222 (10) | −0.0012 (8) |
| C6 | 0.0309 (9) | 0.0317 (9) | 0.0220 (8) | −0.0007 (7) | 0.0127 (7) | −0.0021 (7) |
| C7 | 0.0415 (10) | 0.0335 (10) | 0.0335 (10) | −0.0003 (8) | 0.0134 (8) | 0.0034 (8) |
| C8 | 0.0371 (10) | 0.0394 (11) | 0.0419 (11) | 0.0031 (8) | 0.0108 (8) | 0.0026 (8) |
| C9 | 0.0393 (11) | 0.0432 (11) | 0.0589 (13) | −0.0039 (9) | 0.0233 (10) | −0.0059 (10) |
| Ni—O1i | 2.0422 (12) | O2—C6 | 1.2573 (19) |
| Ni—O1 | 2.0422 (12) | O3—C1 | 1.260 (2) |
| Ni—O3i | 2.1059 (12) | C1—C2 | 1.441 (2) |
| Ni—O3 | 2.1058 (12) | C2—C3 | 1.369 (2) |
| Ni—N2 | 2.0610 (14) | C2—C6 | 1.504 (2) |
| Ni—N2i | 2.0610 (14) | C3—C4 | 1.401 (3) |
| N1—C5 | 1.356 (2) | C3—H3A | 0.9300 |
| N1—C1 | 1.369 (2) | C4—C5 | 1.350 (3) |
| N1—H1 | 0.8600 | C4—H4 | 0.9300 |
| N2—C7 | 1.316 (2) | C5—H5 | 0.9300 |
| N2—C8 | 1.373 (2) | C7—H7 | 0.9300 |
| N3—C7 | 1.337 (2) | C8—C9 | 1.352 (3) |
| N3—C9 | 1.361 (3) | C8—H8 | 0.9300 |
| N3—H3 | 0.8600 | C9—H9 | 0.9300 |
| O1—C6 | 1.250 (2) | ||
| O1i—Ni—O1 | 178.80 (6) | O3—C1—C2 | 127.05 (15) |
| O1i—Ni—N2 | 86.55 (5) | N1—C1—C2 | 115.33 (14) |
| O1—Ni—N2 | 92.62 (5) | C3—C2—C1 | 119.31 (15) |
| O1i—Ni—N2i | 92.62 (5) | C3—C2—C6 | 120.19 (14) |
| O1—Ni—N2i | 86.55 (5) | C1—C2—C6 | 120.47 (14) |
| N2—Ni—N2i | 93.29 (8) | C2—C3—C4 | 122.08 (16) |
| O1i—Ni—O3i | 84.52 (5) | C2—C3—H3A | 119.0 |
| O1—Ni—O3i | 96.37 (5) | C4—C3—H3A | 119.0 |
| N2—Ni—O3i | 170.03 (5) | C5—C4—C3 | 118.07 (17) |
| N2i—Ni—O3i | 91.53 (5) | C5—C4—H4 | 121.0 |
| O1i—Ni—O3 | 96.37 (5) | C3—C4—H4 | 121.0 |
| O1—Ni—O3 | 84.52 (5) | C4—C5—N1 | 120.47 (17) |
| N2—Ni—O3 | 91.53 (5) | C4—C5—H5 | 119.8 |
| N2i—Ni—O3 | 170.03 (5) | N1—C5—H5 | 119.8 |
| O3i—Ni—O3 | 85.08 (7) | O1—C6—O2 | 122.70 (15) |
| C5—N1—C1 | 124.68 (15) | O1—C6—C2 | 120.28 (14) |
| C5—N1—H1 | 117.7 | O2—C6—C2 | 117.02 (15) |
| C1—N1—H1 | 117.7 | N2—C7—N3 | 111.32 (17) |
| C7—N2—C8 | 105.36 (15) | N2—C7—H7 | 124.3 |
| C7—N2—Ni | 123.21 (12) | N3—C7—H7 | 124.3 |
| C8—N2—Ni | 131.20 (12) | C9—C8—N2 | 109.68 (17) |
| C7—N3—C9 | 107.57 (16) | C9—C8—H8 | 125.2 |
| C7—N3—H3 | 126.2 | N2—C8—H8 | 125.2 |
| C9—N3—H3 | 126.2 | C8—C9—N3 | 106.06 (17) |
| C6—O1—Ni | 129.67 (11) | C8—C9—H9 | 127.0 |
| C1—O3—Ni | 117.96 (10) | N3—C9—H9 | 127.0 |
| O3—C1—N1 | 117.62 (14) |
| H··· | ||||
| N1—H1···O2ii | 0.86 | 1.93 | 2.7848 (19) | 177 |
| N3—H3···O2iii | 0.86 | 2.03 | 2.796 (2) | 148 |
| C3—H3A···O3iv | 0.93 | 2.41 | 3.323 (2) | 167 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O2i | 0.86 | 1.93 | 2.7848 (19) | 177 |
| N3—H3⋯O2ii | 0.86 | 2.03 | 2.796 (2) | 148 |
| C3—H3 | 0.93 | 2.41 | 3.323 (2) | 167 |
Symmetry codes: (i) ; (ii) ; (iii) .