Literature DB >> 21579675

Poly[[tris-(μ(3)-2-oxidopyridinium-3-carboxyl-ato)manganese(II)sodium(I)] monohydrate].

Bing-Yu Zhang1, Jing-Jing Nie, Duan-Jun Xu.   

Abstract

In the crystal structure of the title compound, {[MnNa(C(6)H(4)NO(3))(3)]·H(2)O}(n), the Mn(II) cation is located on a threefold rotation axis and is chelated by three 2-oxidopyridinium-3-carboxyl-ate (opc) anions in an octa-hedal coordination. The Na(I) cation is located on a threefold rotation axis and is surrounded by six O atoms from three opc anions. The opc anions link the Mn and Na cations, forming a three-dimensional polymeric structure. The uncoordinated water mol-ecule, located on a threefold rotation axis, is equally disordered over two sites. The three-dimensional network is consolidated by N-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21579675      PMCID: PMC2979764          DOI: 10.1107/S1600536810002953

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related NiII and CoII complexes, see: Zhang et al. (2009a ▶,b ▶). For comparison C—O bond distances in 2-oxidopyridinium-3-carboxyl­ate and 2-hydroxy­pyridine­carboxyl­ate complexes, see: Yao et al. (2004 ▶); Yan & Hu (2007a ▶,b ▶); Wen & Liu (2007 ▶); Quintal et al. (2002 ▶). For comparison C—O bond distances in 2-hydroxy­benzoic acid and 2-hydroxy­benzoate complexes, see: Munshi & Guru Row (2006 ▶); Su & Xu (2005 ▶); Li et al. (2005 ▶).

Experimental

Crystal data

[MnNa(C6H4NO3)3]·H2O M = 510.25 Trigonal, a = 10.1478 (18) Å c = 37.420 (13) Å V = 3337.1 (15) Å3 Z = 6 Mo Kα radiation μ = 0.67 mm−1 T = 294 K 0.33 × 0.28 × 0.26 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.822, T max = 0.840 6825 measured reflections 1315 independent reflections 1236 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.099 S = 1.16 1315 reflections 103 parameters 1 restraint H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.49 e Å−3 Absolute structure: Flack (1983 ▶), 649 Friedel pairs Flack parameter: −0.01 (3) Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810002953/ng2724sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810002953/ng2724Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[MnNa(C6H4NO3)3]·H2ODx = 1.523 Mg m3
Mr = 510.25Mo Kα radiation, λ = 0.71073 Å
Trigonal, R3cCell parameters from 1286 reflections
Hall symbol: R 3 -2"cθ = 2.6–25.0°
a = 10.1478 (18) ŵ = 0.67 mm1
c = 37.420 (13) ÅT = 294 K
V = 3337.1 (15) Å3Prism, brown
Z = 60.33 × 0.28 × 0.26 mm
F(000) = 1554
Rigaku R-AXIS RAPID IP diffractometer1315 independent reflections
Radiation source: fine-focus sealed tube1236 reflections with I > 2σ(I)
graphiteRint = 0.027
Detector resolution: 10.00 pixels mm-1θmax = 25.2°, θmin = 2.6°
ω scanh = −11→11
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −11→11
Tmin = 0.822, Tmax = 0.840l = −44→44
6825 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H-atom parameters constrained
wR(F2) = 0.099w = 1/[σ2(Fo2) + (0.0683P)2 + 0.0175P] where P = (Fo2 + 2Fc2)/3
S = 1.16(Δ/σ)max = 0.001
1315 reflectionsΔρmax = 0.35 e Å3
103 parametersΔρmin = −0.49 e Å3
1 restraintAbsolute structure: Flack (1983), 649 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.01 (3)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Mn0.66670.33330.87519 (2)0.0258 (2)
Na10.66670.33330.96375 (5)0.0283 (5)
N10.7336 (3)0.0138 (3)0.93953 (7)0.0401 (6)
H1N0.76550.07500.95890.048*
O10.4925 (3)−0.1044 (3)0.82611 (6)0.0464 (6)
O20.5735 (3)0.1281 (3)0.84538 (6)0.0377 (6)
O30.6999 (3)0.1941 (3)0.91404 (6)0.0425 (6)
C10.5566 (3)−0.0028 (3)0.84910 (7)0.0292 (6)
C20.6173 (3)−0.0412 (3)0.88206 (8)0.0321 (6)
C30.6828 (3)0.0635 (3)0.91133 (8)0.0293 (6)
C40.7283 (6)−0.1207 (4)0.94099 (12)0.0596 (12)
H40.7664−0.14540.96090.072*
C50.6677 (6)−0.2210 (4)0.91359 (12)0.0689 (13)
H50.6651−0.31390.91410.083*
C60.6092 (6)−0.1799 (4)0.88440 (12)0.0581 (12)
H60.5631−0.24940.86590.070*
O1W0.66670.33330.6735 (14)0.26 (3)0.50
H1W0.58950.32880.66010.310*0.6667
O2W0.66670.33330.6459 (14)0.30 (3)0.50
U11U22U33U12U13U23
Mn0.0289 (3)0.0289 (3)0.0195 (4)0.01446 (13)0.0000.000
Na10.0312 (7)0.0312 (7)0.0225 (11)0.0156 (4)0.0000.000
N10.0555 (16)0.0401 (14)0.0283 (13)0.0266 (13)−0.0171 (12)−0.0075 (10)
O10.0624 (15)0.0393 (12)0.0297 (12)0.0195 (12)−0.0221 (12)−0.0113 (10)
O20.0536 (14)0.0337 (13)0.0250 (11)0.0213 (9)−0.0148 (10)−0.0030 (10)
O30.0703 (17)0.0398 (13)0.0283 (12)0.0358 (13)−0.0199 (12)−0.0107 (11)
C10.0288 (14)0.0302 (16)0.0235 (13)0.0110 (12)−0.0031 (12)−0.0034 (12)
C20.0360 (14)0.0296 (14)0.0269 (15)0.0135 (13)−0.0089 (12)−0.0046 (12)
C30.0348 (15)0.0314 (15)0.0238 (13)0.0180 (13)−0.0069 (11)−0.0005 (11)
C40.094 (3)0.050 (2)0.044 (2)0.043 (2)−0.031 (2)−0.0023 (17)
C50.113 (4)0.042 (2)0.063 (2)0.047 (3)−0.041 (2)−0.011 (2)
C60.091 (3)0.0422 (19)0.048 (2)0.038 (2)−0.034 (2)−0.0189 (17)
O1W0.31 (4)0.31 (4)0.16 (4)0.15 (2)0.0000.000
O2W0.34 (5)0.34 (5)0.23 (6)0.17 (2)0.0000.000
Mn—O22.123 (3)N1—H1N0.9033
Mn—O2i2.123 (3)O1—C11.247 (4)
Mn—O2ii2.123 (3)O2—C11.260 (4)
Mn—O32.168 (2)O3—C31.251 (4)
Mn—O3i2.168 (2)C1—C21.514 (4)
Mn—O3ii2.168 (2)C2—C61.370 (4)
Mn—Na13.314 (2)C2—C31.437 (4)
Na1—O1iii2.331 (2)C4—C51.356 (6)
Na1—O1iv2.331 (3)C4—H40.9300
Na1—O1v2.331 (2)C5—C61.403 (6)
Na1—O32.459 (3)C5—H50.9300
Na1—O3i2.459 (3)C6—H60.9300
Na1—O3ii2.459 (3)O1W—H1W0.9106
N1—C41.339 (5)O2W—H1W0.9294
N1—C31.376 (4)
O2—Mn—O2i94.91 (9)O3—Na1—O3ii69.00 (10)
O2—Mn—O2ii94.91 (9)O3i—Na1—O3ii69.00 (10)
O2i—Mn—O2ii94.91 (9)O1iii—Na1—Mn117.77 (8)
O2—Mn—O381.45 (8)O1iv—Na1—Mn117.77 (8)
O2i—Mn—O3105.70 (10)O1v—Na1—Mn117.77 (8)
O2ii—Mn—O3159.28 (9)O3—Na1—Mn40.85 (6)
O2—Mn—O3i159.28 (9)O3i—Na1—Mn40.85 (6)
O2i—Mn—O3i81.45 (8)O3ii—Na1—Mn40.85 (6)
O2ii—Mn—O3i105.70 (10)C4—N1—C3125.0 (3)
O3—Mn—O3i79.96 (10)C4—N1—H1N119.0
O2—Mn—O3ii105.70 (11)C3—N1—H1N115.8
O2i—Mn—O3ii159.28 (9)C1—O1—Na1vi163.8 (2)
O2ii—Mn—O3ii81.45 (8)C1—O2—Mn137.3 (2)
O3—Mn—O3ii79.96 (10)C3—O3—Mn130.64 (19)
O3i—Mn—O3ii79.96 (10)C3—O3—Na1133.1 (2)
O2—Mn—Na1121.71 (7)Mn—O3—Na191.26 (9)
O2i—Mn—Na1121.71 (7)O1—C1—O2122.4 (3)
O2ii—Mn—Na1121.71 (7)O1—C1—C2117.4 (3)
O3—Mn—Na147.89 (6)O2—C1—C2120.3 (3)
O3i—Mn—Na147.89 (7)C6—C2—C3118.6 (3)
O3ii—Mn—Na147.89 (6)C6—C2—C1119.5 (3)
O1iii—Na1—O1iv100.04 (10)C3—C2—C1121.8 (2)
O1iii—Na1—O1v100.04 (10)O3—C3—N1116.6 (3)
O1iv—Na1—O1v100.04 (10)O3—C3—C2127.8 (3)
O1iii—Na1—O3149.83 (11)N1—C3—C2115.6 (2)
O1iv—Na1—O3109.27 (10)N1—C4—C5120.4 (4)
O1v—Na1—O382.12 (8)N1—C4—H4119.8
O1iii—Na1—O3i82.12 (8)C5—C4—H4119.8
O1iv—Na1—O3i149.83 (11)C4—C5—C6117.8 (3)
O1v—Na1—O3i109.27 (10)C4—C5—H5121.1
O3—Na1—O3i69.00 (10)C6—C5—H5121.1
O1iii—Na1—O3ii109.27 (10)C2—C6—C5122.5 (4)
O1iv—Na1—O3ii82.12 (8)C2—C6—H6118.7
O1v—Na1—O3ii149.83 (11)C5—C6—H6118.7
D—H···AD—HH···AD···AD—H···A
N1—H1N···O1v0.902.122.983 (4)161
N1—H1N···O2v0.902.373.113 (4)140
Table 1

Selected bond lengths (Å)

Mn—O22.123 (3)
Mn—O32.168 (2)
Na1—O1i2.331 (2)
Na1—O32.459 (3)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O1ii0.902.122.983 (4)161
N1—H1N⋯O2ii0.902.373.113 (4)140

Symmetry code: (ii) .

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