| Literature DB >> 21583183 |
Li-Yan Dai, Fu-Liang Zhang, Liang Shen, Ying-Qi Chen.
Abstract
In the title compound, C(8)H(12)N(2)·H(2)O, four substituted pyridine mol-ecules alternate with four water mol-ecules, forming a large ring via O(water)-H⋯N(pyridine) and N(amine)-H⋯O(water) hydrogen bonding. Adjacent rings are connected via O(water)-H⋯O(water) hydrogen-bonds, forming a three-dimensional network.Entities:
Year: 2009 PMID: 21583183 PMCID: PMC2969585 DOI: 10.1107/S1600536809016833
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H12N2·H2O | |
| Mo | |
| Tetragonal, | Cell parameters from 10766 reflections |
| Hall symbol: P -4 2n | θ = 3.3–27.4° |
| µ = 0.07 mm−1 | |
| Chunk, colorless | |
| 0.33 × 0.27 × 0.22 mm | |
| Rigaku R-AXIS RAPID diffractometer | 951 reflections with |
| Detector resolution: 10.00 pixels mm-1 | |
| ω scans | θmax = 27.4° |
| Absorption correction: multi-scan ( | |
| 17243 measured reflections | |
| 1250 independent reflections |
| Refinement on | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.23 e Å−3 | |
| Δρmin = −0.20 e Å−3 | |
| 1250 reflections | Extinction correction: Larson (1970) |
| 101 parameters | Extinction coefficient: 460 (64) |
| H-atom parameters constrained |
| Geometry. ENTER SPECIAL DETAILS OF THE MOLECULAR GEOMETRY |
| Refinement. Refinement using all reflections. The weighted |
| O1 | 0.25888 (6) | 0.28901 (6) | 0.2514 (3) | 0.0571 (4) | |
| N1 | 0.23938 (11) | 0.42486 (10) | 0.3906 (4) | 0.0581 (6) | |
| N2 | 0.19626 (9) | 0.61921 (9) | 0.6961 (4) | 0.0534 (6) | |
| C1 | 0.27642 (12) | 0.47949 (12) | 0.3109 (5) | 0.0528 (7) | |
| C2 | 0.26474 (11) | 0.54519 (11) | 0.4090 (5) | 0.0472 (6) | |
| C3 | 0.21206 (11) | 0.55487 (11) | 0.6011 (4) | 0.0427 (6) | |
| C4 | 0.17323 (12) | 0.49824 (12) | 0.6859 (4) | 0.0465 (6) | |
| C5 | 0.18992 (12) | 0.43602 (12) | 0.5762 (5) | 0.0556 (8) | |
| C6 | 0.33136 (13) | 0.46412 (12) | 0.1049 (7) | 0.0756 (9) | |
| C7 | 0.30672 (12) | 0.60551 (12) | 0.3136 (6) | 0.0690 (9) | |
| C8 | 0.11654 (12) | 0.50507 (12) | 0.8924 (5) | 0.0603 (7) | |
| H5 | 0.1649 | 0.3984 | 0.6350 | 0.067* | |
| H61 | 0.3753 | 0.4674 | 0.1913 | 0.091* | |
| H62 | 0.3251 | 0.4187 | 0.0345 | 0.091* | |
| H63 | 0.3288 | 0.4964 | −0.0428 | 0.091* | |
| H71 | 0.3290 | 0.5943 | 0.1442 | 0.083* | |
| H72 | 0.2774 | 0.6442 | 0.2865 | 0.083* | |
| H73 | 0.3405 | 0.6163 | 0.4495 | 0.083* | |
| H81 | 0.1353 | 0.5184 | 1.0660 | 0.072* | |
| H82 | 0.0847 | 0.5391 | 0.8315 | 0.072* | |
| H83 | 0.0935 | 0.4620 | 0.9113 | 0.072* | |
| H101 | 0.2530 | 0.3317 | 0.2901 | 0.069* | |
| H102 | 0.2457 | 0.2771 | 0.0921 | 0.069* | |
| H201 | 0.1755 | 0.6229 | 0.8489 | 0.064* | |
| H202 | 0.2266 | 0.6511 | 0.6743 | 0.064* |
| O1 | 0.0663 (10) | 0.0465 (9) | 0.0584 (10) | 0.0063 (8) | −0.0044 (9) | −0.0047 (9) |
| N1 | 0.0701 (14) | 0.0454 (11) | 0.0587 (14) | 0.0003 (10) | 0.0039 (14) | −0.0022 (11) |
| N2 | 0.0624 (13) | 0.0433 (11) | 0.0545 (12) | −0.0029 (9) | 0.0092 (11) | −0.0006 (10) |
| C1 | 0.0563 (16) | 0.0549 (16) | 0.0471 (14) | 0.0083 (12) | 0.0024 (13) | −0.0024 (13) |
| C2 | 0.0504 (14) | 0.0454 (14) | 0.0459 (13) | 0.0003 (11) | 0.0032 (14) | 0.0021 (13) |
| C3 | 0.0472 (13) | 0.0398 (12) | 0.0411 (12) | 0.0003 (10) | −0.0022 (12) | 0.0001 (12) |
| C4 | 0.0507 (14) | 0.0452 (13) | 0.0435 (12) | −0.0002 (12) | −0.0022 (12) | 0.0036 (13) |
| C5 | 0.0658 (17) | 0.0454 (15) | 0.0557 (15) | −0.0047 (12) | 0.0015 (15) | 0.0042 (14) |
| C6 | 0.086 (2) | 0.0690 (19) | 0.0717 (19) | 0.0162 (16) | 0.021 (2) | −0.0020 (18) |
| C7 | 0.0674 (17) | 0.0627 (17) | 0.077 (2) | −0.0054 (14) | 0.0164 (17) | 0.0013 (16) |
| C8 | 0.0640 (16) | 0.0609 (15) | 0.0562 (14) | −0.0072 (13) | 0.0067 (15) | 0.0060 (16) |
| N1—C1 | 1.349 (3) | N2—H201 | 0.852 |
| N1—C5 | 1.344 (3) | N2—H202 | 0.868 |
| N2—C3 | 1.377 (2) | C5—H5 | 0.930 |
| C1—C2 | 1.391 (3) | C6—H61 | 0.960 |
| C1—C6 | 1.503 (3) | C6—H62 | 0.960 |
| C2—C3 | 1.407 (3) | C6—H63 | 0.960 |
| C2—C7 | 1.512 (3) | C7—H71 | 0.960 |
| C3—C4 | 1.406 (3) | C7—H72 | 0.960 |
| C4—C5 | 1.370 (3) | C7—H73 | 0.960 |
| C4—C8 | 1.505 (3) | C8—H81 | 0.960 |
| O1—H101 | 0.864 | C8—H82 | 0.960 |
| O1—H102 | 0.852 | C8—H83 | 0.960 |
| C1—N1—C5 | 116.9 (2) | C4—C5—H5 | 117.3 |
| N1—C1—C2 | 123.0 (2) | C1—C6—H61 | 109.5 |
| N1—C1—C6 | 114.8 (2) | C1—C6—H62 | 109.5 |
| C2—C1—C6 | 122.2 (2) | C1—C6—H63 | 109.5 |
| C1—C2—C3 | 118.3 (2) | H61—C6—H62 | 109.5 |
| C1—C2—C7 | 121.8 (2) | H61—C6—H63 | 109.5 |
| C3—C2—C7 | 119.9 (2) | H62—C6—H63 | 109.5 |
| N2—C3—C2 | 120.82 (19) | C2—C7—H71 | 109.5 |
| N2—C3—C4 | 120.0 (2) | C2—C7—H72 | 109.5 |
| C2—C3—C4 | 119.1 (2) | C2—C7—H73 | 109.5 |
| C3—C4—C5 | 117.2 (2) | H71—C7—H72 | 109.5 |
| C3—C4—C8 | 121.7 (2) | H71—C7—H73 | 109.5 |
| C5—C4—C8 | 121.1 (2) | H72—C7—H73 | 109.5 |
| N1—C5—C4 | 125.4 (2) | C4—C8—H81 | 109.5 |
| H101—O1—H102 | 115.0 | C4—C8—H82 | 109.5 |
| C3—N2—H201 | 118.6 | C4—C8—H83 | 109.5 |
| C3—N2—H202 | 117.5 | H81—C8—H82 | 109.5 |
| H201—N2—H202 | 111.9 | H81—C8—H83 | 109.5 |
| N1—C5—H5 | 117.3 | H82—C8—H83 | 109.5 |
| C1—N1—C5—C4 | 1.5 (3) | C7—C2—C3—N2 | 2.6 (3) |
| C5—N1—C1—C2 | −0.9 (3) | C7—C2—C3—C4 | 179.6 (2) |
| C5—N1—C1—C6 | 179.6 (2) | N2—C3—C4—C5 | 177.6 (2) |
| N1—C1—C2—C3 | 0.3 (3) | N2—C3—C4—C8 | −3.5 (3) |
| N1—C1—C2—C7 | −179.4 (2) | C2—C3—C4—C5 | 0.6 (3) |
| C6—C1—C2—C3 | 179.8 (2) | C2—C3—C4—C8 | 179.5 (2) |
| C6—C1—C2—C7 | 0.1 (2) | C3—C4—C5—N1 | −1.3 (3) |
| C1—C2—C3—N2 | −177.1 (2) | C8—C4—C5—N1 | 179.8 (2) |
| C1—C2—C3—C4 | −0.2 (3) |
| H··· | ||||
| O1—H101···N1 | 0.86 | 1.91 | 2.771 (2) | 178 |
| O1—H102···O1i | 0.85 | 1.93 | 2.778 (2) | 173 |
| N2—H202···O1ii | 0.87 | 2.17 | 3.009 (2) | 161 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H101⋯N1 | 0.86 | 1.91 | 2.771 (2) | 178 |
| O1—H102⋯O1i | 0.85 | 1.93 | 2.778 (2) | 173 |
| N2—H202⋯O1ii | 0.87 | 2.17 | 3.009 (2) | 161 |
Symmetry codes: (i) ; (ii) .