Literature DB >> 21201728

3,6-Dichloro-catechol.

An-Le Xie1, Tong-Jian Ding, Xiao-Ping Cao.   

Abstract

The title compound, C(6)H(4)Cl(2)O(2), exhibits a two-dimensional supra-molecular hydrogen-bonded network and forms a three-dimensional network supra-molecular structure via hydrogen bonds and π-π stacking of benzene rings. The π-π inter-actions are between the benzene rings of centrosymmetrically related mol-ecules, with centroid-centroid distances of 3.7676 (13) and 3.7107 (13) Å.

Entities:  

Year:  2008        PMID: 21201728      PMCID: PMC2960712          DOI: 10.1107/S1600536808025014

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Haigler et al. (1988 ▶); Kirsh & Stan (1994 ▶); Nishizawa & Satoh (1975a ▶,b ▶); Sander et al. (1991 ▶); Schraa et al. (1986 ▶); Spiess et al. (1995 ▶); Spain et al. (1989 ▶).

Experimental

Crystal data

C6H4Cl2O2 M = 178.99 Monoclinic, a = 7.4411 (7) Å b = 10.1283 (10) Å c = 10.6448 (8) Å β = 119.903 (5)° V = 695.45 (11) Å3 Z = 4 Mo Kα radiation μ = 0.86 mm−1 T = 296 K 0.36 × 0.17 × 0.15 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1997 ▶) T min = 0.748, T max = 0.882 3531 measured reflections 1243 independent reflections 1117 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.118 S = 1.01 1243 reflections 93 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.34 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SMART; data reduction: SAINT (Bruker, 1997 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808025014/bq2078sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808025014/bq2078Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H4Cl2O2F000 = 360
Mr = 178.99Dx = 1.710 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2193 reflections
a = 7.4411 (7) Åθ = 2.9–26.4º
b = 10.1283 (10) ŵ = 0.86 mm1
c = 10.6448 (8) ÅT = 296 K
β = 119.903 (5)ºBlock, colorless
V = 695.45 (11) Å30.36 × 0.17 × 0.15 mm
Z = 4
Bruker SMART CCD area-detector diffractometer1243 independent reflections
Radiation source: fine-focus sealed tube1117 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.017
T = 296 Kθmax = 25.2º
φ and ω scansθmin = 3.0º
Absorption correction: multi-scan(SADABS; Bruker, 1997)h = −8→8
Tmin = 0.748, Tmax = 0.882k = −9→12
3531 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H-atom parameters constrained
wR(F2) = 0.118  w = 1/[σ2(Fo2) + (0.01P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.001
1243 reflectionsΔρmax = 0.18 e Å3
93 parametersΔρmin = −0.34 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR andgoodness of fit S are based on F2, conventional R-factors R are basedon F, with F set to zero for negative F2. The threshold expression ofF2 > σ(F2) is used only for calculating R-factors(gt) etc. and isnot relevant to the choice of reflections for refinement. R-factors basedon F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.84969 (7)1.04043 (6)0.81747 (4)0.0483 (3)
Cl20.64593 (7)0.99288 (7)0.17713 (4)0.0529 (3)
O10.8451 (2)0.79625 (12)0.66807 (12)0.0487 (4)
H10.85780.73310.62490.073*
O20.7560 (2)0.76889 (12)0.39645 (12)0.0490 (4)
H20.75700.77080.31980.074*
C10.7904 (3)1.02895 (16)0.63843 (18)0.0344 (4)
C20.7954 (2)0.90633 (16)0.58289 (15)0.0335 (4)
C30.7515 (2)0.89485 (16)0.44037 (17)0.0330 (4)
C40.7012 (3)1.00694 (18)0.35485 (17)0.0356 (4)
C50.6955 (3)1.13066 (18)0.41095 (17)0.0433 (4)
H50.66191.20560.35300.052*
C60.7397 (3)1.14090 (18)0.55181 (19)0.0415 (4)
H60.73591.22300.58960.050*
U11U22U33U12U13U23
Cl10.0647 (4)0.0507 (4)0.0356 (4)−0.00327 (18)0.0296 (3)−0.00797 (16)
Cl20.0633 (4)0.0666 (5)0.0307 (4)0.0071 (2)0.0248 (3)0.00907 (18)
O10.0832 (10)0.0343 (7)0.0401 (7)0.0122 (6)0.0393 (7)0.0089 (5)
O20.0835 (10)0.0351 (7)0.0414 (7)−0.0021 (6)0.0409 (7)−0.0039 (5)
C10.0382 (9)0.0370 (9)0.0307 (8)−0.0029 (6)0.0192 (7)−0.0042 (6)
C20.0394 (8)0.0323 (9)0.0317 (8)0.0010 (7)0.0199 (7)0.0053 (6)
C30.0373 (8)0.0334 (9)0.0298 (7)−0.0025 (6)0.0177 (6)−0.0020 (6)
C40.0360 (9)0.0445 (10)0.0276 (8)−0.0007 (7)0.0169 (7)0.0042 (7)
C50.0488 (10)0.0354 (9)0.0450 (9)0.0037 (7)0.0230 (8)0.0100 (7)
C60.0508 (10)0.0309 (9)0.0429 (8)0.0009 (7)0.0234 (7)−0.0003 (7)
O1—H10.8200C3—O21.365 (2)
O2—H20.8200C3—C41.385 (2)
C1—C21.384 (2)C4—C51.398 (2)
C1—C61.390 (2)C4—Cl21.7299 (16)
C1—Cl11.7326 (17)C5—C61.369 (3)
C2—O11.3666 (18)C5—H50.9300
C2—C31.388 (2)C6—H60.9300
O1—C2—C1120.31 (13)C3—C4—C5120.65 (15)
O1—C2—C3119.68 (14)C3—C4—Cl2119.36 (13)
O2—C3—C4125.85 (14)C4—C3—C2119.27 (15)
O2—C3—C2114.84 (14)C4—C5—H5120.2
C1—C2—C3120.02 (14)C5—C4—Cl2119.98 (13)
C1—C6—H6119.9C5—C6—C1120.16 (16)
C2—O1—H1109.5C5—C6—H6119.9
C2—C1—C6120.32 (15)C6—C5—C4119.59 (15)
C2—C1—Cl1118.94 (12)C6—C1—Cl1120.75 (13)
C3—O2—H2109.5C6—C5—H5120.2
Cl1—C1—C2—O10.4 (2)C1—C2—C3—C4−0.5 (2)
Cl1—C1—C2—C3−179.06 (12)C2—C1—C6—C5−0.3 (3)
Cl1—C1—C6—C5179.23 (13)C2—C3—C4—C50.3 (2)
Cl2—C4—C5—C6−179.92 (13)C2—C3—C4—Cl2−179.90 (12)
O1—C2—C3—O22.1 (2)C3—C4—C5—C6−0.1 (3)
O1—C2—C3—C4179.98 (15)C4—C5—C6—C10.2 (3)
O2—C3—C4—C5177.97 (16)C6—C1—C2—O1−179.97 (15)
O2—C3—C4—Cl2−2.3 (2)C6—C1—C2—C30.5 (2)
C1—C2—C3—O2−178.41 (15)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.822.192.6391 (17)115
O1—H1···Cl1i0.822.763.3980 (16)137
O2—H2···Cl20.822.613.0597 (13)116
O2—H2···O1ii0.822.132.8969 (19)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O20.822.192.6391 (17)115
O1—H1⋯Cl1i0.822.763.3980 (16)137
O2—H2⋯Cl20.822.613.0597 (13)116
O2—H2⋯O1ii0.822.132.8969 (19)155

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Degradation of 1,2,4-trichloro- and 1,2,4,5-tetrachlorobenzene by pseudomonas strains.

Authors:  P Sander; R M Wittich; P Fortnagel; H Wilkes; W Francke
Journal:  Appl Environ Microbiol       Date:  1991-05       Impact factor: 4.792

3.  Monohydroxylation of phenol and 2,5-dichlorophenol by toluene dioxygenase in Pseudomonas putida F1.

Authors:  J C Spain; G J Zylstra; C K Blake; D T Gibson
Journal:  Appl Environ Microbiol       Date:  1989-10       Impact factor: 4.792

4.  Degradation of 1,4-dichlorobenzene by Alcaligenes sp. strain A175.

Authors:  G Schraa; M L Boone; M S Jetten; A R van Neerven; P J Colberg; A J Zehnder
Journal:  Appl Environ Microbiol       Date:  1986-12       Impact factor: 4.792

5.  Degradation of 1,4-dichlorobenzene by Xanthobacter flavus 14p1.

Authors:  E Spiess; C Sommer; H Görisch
Journal:  Appl Environ Microbiol       Date:  1995-11       Impact factor: 4.792

6.  Degradation of 1,2-dichlorobenzene by a Pseudomonas sp.

Authors:  B E Haigler; S F Nishino; J C Spain
Journal:  Appl Environ Microbiol       Date:  1988-02       Impact factor: 4.792

  6 in total
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1.  4-Amino-2,3,5-trimethyl-pyridine monohydrate.

Authors:  Li-Yan Dai; Fu-Liang Zhang; Liang Shen; Ying-Qi Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-20
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