Literature DB >> 21582893

3-(4-Fluoro-phen-yl)-6-meth-oxy-2-(4-pyrid-yl)quinoxaline.

Hartmut Jahns, Pierre Koch, Dieter Schollmeyer, Stefan Laufer.   

Abstract

In the title compound, C(20)H(14)FN(3)O, the quinoxaline system makes dihedral angles of 32.38 (7) and 48.04 (7)° with the 4-fluoro-phenyl and pyridine rings, respectively. The 4-fluoro-phenyl ring makes a dihedral angle of 57.77 (9)° with the pyridine ring. In the crystal, the mol-ecules form dimeric C-H⋯N hydrogen-bonded R(2) (2)(20) ring motifs lying about crystallographic inversion centers. The dimeric units stack via π-π inter-actions between methoxy-phenyl rings and pyridine-fluoro-phenyl rings with centroid-centroid distances of 3.720 (1) and 3.823 (1) Å, respectively. The respective average perpendicular distances are 3.421 and 3.378 Å, with dihedral angles between the rings of 1.31 (9) and 11.64 (9)°.

Entities:  

Year:  2009        PMID: 21582893      PMCID: PMC2969274          DOI: 10.1107/S1600536809022119

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Many chinoxaline derivatives have been prepared and their biological activity have been studied, see: He et al. (2003 ▶); Kim et al. (2004 ▶). For inter­molecular C—H⋯N hydrogen bonds, see: Taylor & Kennard (1982 ▶). For distinct ring motifs formed via O—H⋯N hydrogen bonds, see: Habib & Janiak (2008 ▶); Friščič & MacGillivray (2003 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C20H14FN3O M = 331.34 Orthorhombic, a = 7.3886 (4) Å b = 12.2071 (8) Å c = 34.562 (6) Å V = 3117.3 (6) Å3 Z = 8 Cu Kα radiation μ = 0.80 mm−1 T = 193 K 0.45 × 0.22 × 0.13 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 2950 measured reflections 2950 independent reflections 2542 reflections with I > 2σ(I) 3 standard reflections frequency: 60 min intensity decay: 2%

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.124 S = 1.05 2950 reflections 228 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809022119/si2176sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022119/si2176Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H14FN3OF(000) = 1376
Mr = 331.34Dx = 1.412 Mg m3
Orthorhombic, PbcaCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ac 2abCell parameters from 25 reflections
a = 7.3886 (4) Åθ = 61–69°
b = 12.2071 (8) ŵ = 0.80 mm1
c = 34.562 (6) ÅT = 193 K
V = 3117.3 (6) Å3Plate, colourless
Z = 80.45 × 0.22 × 0.13 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.0000
Radiation source: FR571 rotating anodeθmax = 70.1°, θmin = 2.6°
graphiteh = 0→8
ω/2θ scansk = 0→14
2950 measured reflectionsl = 0→42
2950 independent reflections3 standard reflections every 60 min
2542 reflections with I > 2σ(I) intensity decay: 2%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.124w = 1/[σ2(Fo2) + (0.063P)2 + 1.8096P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2950 reflectionsΔρmax = 0.32 e Å3
228 parametersΔρmin = −0.24 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0024 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.0332 (2)0.08992 (13)0.65003 (5)0.0212 (4)
C20.1240 (2)−0.01069 (13)0.64015 (5)0.0234 (4)
N30.1695 (2)−0.08283 (11)0.66708 (4)0.0248 (3)
C40.1415 (2)−0.05500 (14)0.70477 (5)0.0241 (4)
C50.1912 (2)−0.12816 (15)0.73464 (5)0.0280 (4)
H50.2383−0.19840.72840.034*
C60.1717 (3)−0.09798 (15)0.77228 (5)0.0290 (4)
H60.2040−0.14780.79220.035*
C70.1034 (2)0.00738 (15)0.78208 (5)0.0257 (4)
C80.0529 (2)0.07962 (14)0.75376 (5)0.0253 (4)
H80.00740.14990.76040.030*
C90.0691 (2)0.04866 (14)0.71462 (5)0.0224 (4)
N100.01133 (19)0.11909 (11)0.68664 (4)0.0228 (3)
C11−0.0457 (2)0.16507 (13)0.62087 (5)0.0214 (4)
C12−0.0501 (2)0.27756 (14)0.62867 (5)0.0240 (4)
H120.00200.30470.65190.029*
C13−0.1297 (3)0.34958 (14)0.60292 (5)0.0277 (4)
H13−0.13410.42580.60840.033*
C14−0.2026 (2)0.30841 (15)0.56913 (5)0.0277 (4)
C15−0.2047 (3)0.19825 (15)0.56049 (5)0.0286 (4)
H15−0.25900.17200.53740.034*
C16−0.1249 (2)0.12698 (14)0.58669 (5)0.0258 (4)
H16−0.12400.05070.58130.031*
F17−0.27461 (17)0.37943 (9)0.54317 (3)0.0401 (3)
C180.1841 (2)−0.03833 (14)0.60030 (5)0.0239 (4)
C190.1592 (3)−0.14261 (14)0.58520 (5)0.0286 (4)
H190.0981−0.19730.59980.034*
C200.2249 (3)−0.16553 (15)0.54863 (5)0.0340 (4)
H200.2038−0.23670.53850.041*
N210.3161 (2)−0.09438 (13)0.52658 (5)0.0344 (4)
C220.3408 (3)0.00561 (15)0.54154 (5)0.0317 (4)
H220.40530.05800.52660.038*
C230.2776 (2)0.03680 (14)0.57757 (5)0.0272 (4)
H230.29790.10910.58670.033*
O240.09436 (18)0.02718 (11)0.82084 (3)0.0324 (3)
C250.0370 (3)0.13400 (17)0.83218 (6)0.0356 (5)
H25A0.11830.18880.82090.053*
H25B0.04000.13980.86050.053*
H25C−0.08660.14680.82300.053*
U11U22U33U12U13U23
C10.0199 (8)0.0226 (8)0.0211 (8)−0.0022 (6)0.0009 (6)−0.0003 (6)
C20.0229 (8)0.0223 (8)0.0248 (8)−0.0015 (7)0.0009 (7)0.0012 (6)
N30.0253 (7)0.0243 (7)0.0249 (7)0.0000 (6)0.0026 (6)0.0024 (6)
C40.0201 (8)0.0264 (8)0.0259 (8)−0.0007 (7)0.0018 (6)0.0031 (7)
C50.0270 (9)0.0260 (8)0.0311 (9)0.0018 (7)0.0026 (7)0.0058 (7)
C60.0267 (9)0.0313 (9)0.0289 (9)0.0013 (8)−0.0004 (7)0.0100 (7)
C70.0207 (8)0.0355 (10)0.0209 (8)−0.0039 (7)0.0012 (7)0.0049 (7)
C80.0237 (8)0.0265 (8)0.0257 (8)−0.0004 (7)0.0014 (7)0.0011 (7)
C90.0184 (8)0.0254 (8)0.0234 (8)−0.0022 (7)0.0004 (6)0.0038 (7)
N100.0225 (7)0.0237 (7)0.0221 (7)−0.0001 (6)0.0002 (6)0.0013 (6)
C110.0195 (8)0.0225 (8)0.0220 (8)−0.0002 (6)0.0024 (6)−0.0002 (6)
C120.0225 (8)0.0248 (8)0.0246 (8)−0.0003 (6)0.0000 (7)−0.0019 (7)
C130.0293 (9)0.0226 (8)0.0312 (9)0.0019 (7)0.0014 (7)−0.0001 (7)
C140.0258 (9)0.0310 (9)0.0263 (9)0.0045 (7)−0.0004 (7)0.0068 (7)
C150.0283 (10)0.0354 (9)0.0221 (8)0.0011 (8)−0.0029 (7)−0.0020 (7)
C160.0258 (9)0.0245 (8)0.0272 (8)−0.0004 (7)0.0006 (7)−0.0031 (7)
F170.0459 (7)0.0397 (6)0.0347 (6)0.0119 (5)−0.0078 (5)0.0092 (5)
C180.0219 (8)0.0235 (8)0.0262 (9)0.0030 (7)−0.0012 (7)0.0001 (7)
C190.0318 (10)0.0241 (9)0.0300 (9)−0.0010 (7)0.0004 (8)0.0014 (7)
C200.0444 (12)0.0253 (9)0.0323 (9)−0.0019 (8)−0.0002 (9)−0.0058 (8)
N210.0429 (10)0.0319 (8)0.0284 (8)0.0021 (7)0.0025 (7)−0.0039 (7)
C220.0369 (11)0.0293 (9)0.0288 (9)−0.0010 (8)0.0053 (8)0.0017 (7)
C230.0303 (9)0.0228 (8)0.0284 (9)−0.0008 (7)0.0011 (7)−0.0022 (7)
O240.0350 (7)0.0406 (8)0.0216 (6)0.0003 (6)−0.0003 (5)0.0052 (5)
C250.0353 (11)0.0436 (11)0.0279 (9)0.0009 (9)0.0001 (8)−0.0011 (8)
C1—N101.324 (2)C13—C141.381 (3)
C1—C21.440 (2)C13—H130.9500
C1—C111.482 (2)C14—F171.356 (2)
C2—N31.325 (2)C14—C151.378 (3)
C2—C181.486 (2)C15—C161.387 (2)
N3—C41.362 (2)C15—H150.9500
C4—C51.414 (2)C16—H160.9500
C4—C91.416 (2)C18—C191.388 (2)
C5—C61.360 (3)C18—C231.391 (2)
C5—H50.9500C19—C201.382 (3)
C6—C71.423 (3)C19—H190.9500
C6—H60.9500C20—N211.338 (3)
C7—O241.363 (2)C20—H200.9500
C7—C81.369 (2)N21—C221.338 (2)
C8—C91.410 (2)C22—C231.384 (3)
C8—H80.9500C22—H220.9500
C9—N101.363 (2)C23—H230.9500
C11—C161.398 (2)O24—C251.426 (2)
C11—C121.400 (2)C25—H25A0.9800
C12—C131.382 (2)C25—H25B0.9800
C12—H120.9500C25—H25C0.9800
N10—C1—C2120.82 (15)C12—C13—H13120.7
N10—C1—C11115.80 (15)F17—C14—C15118.43 (16)
C2—C1—C11123.35 (15)F17—C14—C13118.67 (16)
N3—C2—C1121.23 (15)C15—C14—C13122.89 (16)
N3—C2—C18115.13 (15)C14—C15—C16117.77 (17)
C1—C2—C18123.52 (15)C14—C15—H15121.1
C2—N3—C4117.89 (15)C16—C15—H15121.1
N3—C4—C5120.10 (16)C15—C16—C11121.39 (16)
N3—C4—C9120.69 (15)C15—C16—H16119.3
C5—C4—C9119.16 (16)C11—C16—H16119.3
C6—C5—C4120.00 (17)C19—C18—C23117.26 (16)
C6—C5—H5120.0C19—C18—C2121.15 (16)
C4—C5—H5120.0C23—C18—C2121.47 (15)
C5—C6—C7120.69 (16)C20—C19—C18118.88 (17)
C5—C6—H6119.7C20—C19—H19120.6
C7—C6—H6119.7C18—C19—H19120.6
O24—C7—C8125.10 (17)N21—C20—C19124.49 (17)
O24—C7—C6114.32 (15)N21—C20—H20117.8
C8—C7—C6120.58 (16)C19—C20—H20117.8
C7—C8—C9119.36 (16)C20—N21—C22116.18 (16)
C7—C8—H8120.3N21—C22—C23123.54 (17)
C9—C8—H8120.3N21—C22—H22118.2
N10—C9—C8119.04 (15)C23—C22—H22118.2
N10—C9—C4120.78 (15)C22—C23—C18119.64 (16)
C8—C9—C4120.17 (15)C22—C23—H23120.2
C1—N10—C9118.06 (15)C18—C23—H23120.2
C16—C11—C12118.64 (16)C7—O24—C25116.56 (14)
C16—C11—C1122.23 (15)O24—C25—H25A109.5
C12—C11—C1119.03 (15)O24—C25—H25B109.5
C13—C12—C11120.66 (16)H25A—C25—H25B109.5
C13—C12—H12119.7O24—C25—H25C109.5
C11—C12—H12119.7H25A—C25—H25C109.5
C14—C13—C12118.61 (16)H25B—C25—H25C109.5
C14—C13—H13120.7
N10—C1—C2—N37.9 (3)N10—C1—C11—C1232.8 (2)
C11—C1—C2—N3−170.22 (16)C2—C1—C11—C12−149.01 (16)
N10—C1—C2—C18−167.94 (16)C16—C11—C12—C13−0.6 (3)
C11—C1—C2—C1813.9 (3)C1—C11—C12—C13−177.19 (16)
C1—C2—N3—C4−5.4 (2)C11—C12—C13—C14−0.8 (3)
C18—C2—N3—C4170.78 (15)C12—C13—C14—F17−177.56 (16)
C2—N3—C4—C5−178.67 (16)C12—C13—C14—C152.1 (3)
C2—N3—C4—C9−1.1 (2)F17—C14—C15—C16177.79 (16)
N3—C4—C5—C6176.67 (16)C13—C14—C15—C16−1.9 (3)
C9—C4—C5—C6−1.0 (3)C14—C15—C16—C110.4 (3)
C4—C5—C6—C7−0.7 (3)C12—C11—C16—C150.8 (3)
C5—C6—C7—O24−178.82 (16)C1—C11—C16—C15177.30 (16)
C5—C6—C7—C81.2 (3)N3—C2—C18—C1946.7 (2)
O24—C7—C8—C9−179.94 (15)C1—C2—C18—C19−137.24 (18)
C6—C7—C8—C90.0 (3)N3—C2—C18—C23−129.12 (18)
C7—C8—C9—N10177.21 (16)C1—C2—C18—C2347.0 (3)
C7—C8—C9—C4−1.7 (3)C23—C18—C19—C20−1.1 (3)
N3—C4—C9—N105.7 (3)C2—C18—C19—C20−177.09 (17)
C5—C4—C9—N10−176.72 (16)C18—C19—C20—N211.7 (3)
N3—C4—C9—C8−175.42 (15)C19—C20—N21—C22−1.0 (3)
C5—C4—C9—C82.2 (3)C20—N21—C22—C23−0.1 (3)
C2—C1—N10—C9−3.2 (2)N21—C22—C23—C180.6 (3)
C11—C1—N10—C9175.05 (14)C19—C18—C23—C220.1 (3)
C8—C9—N10—C1177.83 (15)C2—C18—C23—C22176.04 (17)
C4—C9—N10—C1−3.2 (2)C8—C7—O24—C25−3.7 (3)
N10—C1—C11—C16−143.69 (17)C6—C7—O24—C25176.37 (16)
C2—C1—C11—C1634.5 (2)
D—H···AD—HH···AD···AD—H···A
C15—H15···N21i0.952.443.368 (3)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H15⋯N21i0.952.443.368 (3)165

Symmetry code: (i) .

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