| Literature DB >> 21202840 |
Hesham A Habib1, Christoph Janiak.
Abstract
The title compound, 4C(9)H(6)O(6)·C(6)H(8)N(6)·2H(2)O, crystallizes in a layer structure where each sheet is composed of anellated hydrogen-bonded rings of six distinct sizes: R(2) (2)(16), R(3) (3)(18), R(4) (4)(12), R(4) (4)(18), R(4) (4)(22) and R(4) (4)(25). The two largest rings, viz. R(4) (4)(22) and R(4) (4)(25), are associated with O-H⋯N bonds from the carboxyl groups to the triazole rings. The typical head-to-tail carbox-yl-carboxyl R(2) (2)(8) motif is not observed.Entities:
Year: 2008 PMID: 21202840 PMCID: PMC2961855 DOI: 10.1107/S1600536808015808
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 4C9H6O6·C6H8N6·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 5028 reflections | |
| θ = 2.2–31.5º | |
| µ = 0.13 mm−1 | |
| α = 108.801 (1)º | |
| β = 98.737 (1)º | Needle, colourless |
| γ = 113.340 (1)º | 0.37 × 0.05 × 0.02 mm |
| Bruker APEXII CCD area-detector diffractometer | 4824 independent reflections |
| Radiation source: fine-focus sealed tube | 3452 reflections with |
| Monochromator: graphite | |
| θmax = 27.1º | |
| ω scans | θmin = 1.8º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1996) | |
| 20984 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 4824 reflections | Δρmax = 0.25 e Å−3 |
| 359 parameters | Δρmin = −0.24 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Experimental. IR (KBr) 3512 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 1.35077 (13) | 0.71622 (12) | 0.20868 (9) | 0.0281 (3) | |
| O2 | 1.12433 (15) | 0.50380 (13) | 0.11195 (10) | 0.0342 (3) | |
| H2 | 1.169 (2) | 0.490 (2) | 0.0526 (19) | 0.051* | |
| O3 | 0.72628 (14) | 0.32810 (13) | 0.28747 (10) | 0.0357 (3) | |
| O4 | 0.75183 (14) | 0.47603 (13) | 0.46864 (10) | 0.0295 (3) | |
| H4 | 0.658 (3) | 0.402 (2) | 0.4509 (17) | 0.044* | |
| O5 | 1.23563 (17) | 0.97506 (14) | 0.69889 (11) | 0.0479 (4) | |
| O6 | 1.41605 (14) | 1.03213 (13) | 0.61107 (11) | 0.0335 (3) | |
| H6 | 1.473 (3) | 1.117 (2) | 0.6791 (19) | 0.050* | |
| C1 | 1.15857 (19) | 0.65177 (17) | 0.30595 (13) | 0.0226 (3) | |
| C2 | 1.01588 (19) | 0.54260 (17) | 0.29865 (13) | 0.0241 (4) | |
| H2A | 0.9603 | 0.4520 | 0.2306 | 0.031 (5)* | |
| C3 | 0.95434 (19) | 0.56593 (17) | 0.39110 (13) | 0.0224 (3) | |
| C4 | 1.03774 (18) | 0.69911 (17) | 0.49313 (13) | 0.0230 (3) | |
| H4A | 0.9963 | 0.7159 | 0.5555 | 0.028* | |
| C5 | 1.18299 (19) | 0.80705 (17) | 0.50200 (13) | 0.0228 (3) | |
| C6 | 1.24244 (19) | 0.78375 (17) | 0.40836 (13) | 0.0230 (3) | |
| H6A | 1.3397 | 0.8576 | 0.4144 | 0.028* | |
| C7 | 1.22269 (19) | 0.62928 (17) | 0.20573 (13) | 0.0235 (3) | |
| C8 | 0.79976 (19) | 0.44429 (17) | 0.37606 (14) | 0.0237 (3) | |
| C9 | 1.2777 (2) | 0.94488 (18) | 0.61364 (14) | 0.0260 (4) | |
| O7 | 0.23309 (14) | 0.11931 (13) | 0.42638 (10) | 0.0327 (3) | |
| H7 | 0.230 (2) | 0.064 (2) | 0.349 (2) | 0.049* | |
| O8 | 0.47138 (14) | 0.26410 (13) | 0.43007 (10) | 0.0369 (3) | |
| O9 | 0.82100 (16) | 0.72343 (14) | 0.77430 (11) | 0.0405 (3) | |
| H9 | 0.916 (3) | 0.808 (3) | 0.814 (2) | 0.061* | |
| O10 | 0.75891 (16) | 0.79239 (14) | 0.93837 (11) | 0.0487 (4) | |
| O11 | 0.23548 (16) | 0.46243 (14) | 0.93776 (11) | 0.0443 (4) | |
| O12 | 0.10133 (15) | 0.22723 (13) | 0.79990 (11) | 0.0360 (3) | |
| H12 | 0.029 (3) | 0.214 (2) | 0.8372 (19) | 0.054* | |
| C11 | 0.40237 (18) | 0.33372 (17) | 0.60392 (13) | 0.0226 (3) | |
| C12 | 0.54215 (19) | 0.46733 (17) | 0.66014 (14) | 0.0248 (4) | |
| H12A | 0.6137 | 0.4932 | 0.6193 | 0.030* | |
| C13 | 0.57695 (19) | 0.56305 (17) | 0.77641 (14) | 0.0252 (4) | |
| C14 | 0.47026 (19) | 0.52582 (17) | 0.83609 (14) | 0.0259 (4) | |
| H14A | 0.4929 | 0.5908 | 0.9144 | 0.031* | |
| C15 | 0.33011 (19) | 0.39277 (17) | 0.78027 (14) | 0.0242 (4) | |
| C16 | 0.29563 (19) | 0.29562 (17) | 0.66414 (13) | 0.0226 (3) | |
| H16A | 0.2012 | 0.2052 | 0.6267 | 0.027* | |
| C17 | 0.37241 (19) | 0.23634 (17) | 0.47946 (14) | 0.0255 (4) | |
| C18 | 0.7287 (2) | 0.70561 (18) | 0.83851 (15) | 0.0295 (4) | |
| C19 | 0.2168 (2) | 0.36255 (19) | 0.84716 (14) | 0.0276 (4) | |
| O13 | 1.09496 (16) | 0.94370 (15) | 0.86765 (12) | 0.0442 (4) | |
| H13A | 1.134 (3) | 1.031 (3) | 0.932 (2) | 0.066* | |
| H13B | 1.129 (3) | 0.959 (3) | 0.813 (2) | 0.066* | |
| C21 | 0.2033 (2) | −0.17823 (19) | 0.03864 (14) | 0.0307 (4) | |
| H21A | 0.1519 | −0.2613 | −0.0349 | 0.037* | |
| C22 | 0.3793 (2) | 0.02501 (18) | 0.18472 (14) | 0.0277 (4) | |
| H22A | 0.4747 | 0.1115 | 0.2332 | 0.033* | |
| C23 | 0.4714 (2) | −0.0680 (2) | 0.01332 (16) | 0.0338 (4) | |
| H23A | 0.4241 | −0.1585 | −0.0605 | 0.041* | |
| H23B | 0.5608 | −0.0657 | 0.0623 | 0.041* | |
| N1 | 0.25099 (16) | −0.01876 (15) | 0.21283 (12) | 0.0281 (3) | |
| N2 | 0.13810 (16) | −0.14927 (15) | 0.11899 (12) | 0.0293 (3) | |
| N3 | 0.35506 (16) | −0.07258 (15) | 0.07521 (11) | 0.0272 (3) |
| O1 | 0.0239 (6) | 0.0268 (6) | 0.0238 (6) | 0.0049 (5) | 0.0126 (5) | 0.0063 (5) |
| O2 | 0.0292 (7) | 0.0311 (7) | 0.0215 (6) | 0.0013 (6) | 0.0140 (5) | 0.0010 (5) |
| O3 | 0.0264 (7) | 0.0300 (7) | 0.0276 (7) | −0.0011 (6) | 0.0100 (5) | 0.0032 (6) |
| O4 | 0.0195 (6) | 0.0265 (6) | 0.0300 (6) | 0.0014 (5) | 0.0130 (5) | 0.0073 (5) |
| O5 | 0.0467 (9) | 0.0343 (7) | 0.0338 (7) | 0.0005 (6) | 0.0268 (7) | −0.0017 (6) |
| O6 | 0.0236 (7) | 0.0270 (6) | 0.0248 (6) | −0.0018 (5) | 0.0099 (5) | −0.0015 (5) |
| C1 | 0.0207 (8) | 0.0239 (8) | 0.0197 (8) | 0.0080 (7) | 0.0084 (7) | 0.0075 (7) |
| C2 | 0.0208 (9) | 0.0237 (8) | 0.0187 (8) | 0.0054 (7) | 0.0065 (7) | 0.0049 (7) |
| C3 | 0.0187 (8) | 0.0223 (8) | 0.0225 (8) | 0.0070 (7) | 0.0074 (7) | 0.0081 (7) |
| C4 | 0.0209 (8) | 0.0235 (8) | 0.0221 (8) | 0.0079 (7) | 0.0111 (7) | 0.0082 (7) |
| C5 | 0.0207 (9) | 0.0219 (8) | 0.0228 (8) | 0.0079 (7) | 0.0091 (7) | 0.0078 (7) |
| C6 | 0.0178 (8) | 0.0226 (8) | 0.0229 (8) | 0.0050 (7) | 0.0093 (7) | 0.0076 (7) |
| C7 | 0.0211 (9) | 0.0219 (8) | 0.0209 (8) | 0.0058 (7) | 0.0084 (7) | 0.0065 (7) |
| C8 | 0.0191 (8) | 0.0245 (8) | 0.0240 (8) | 0.0069 (7) | 0.0083 (7) | 0.0100 (7) |
| C9 | 0.0248 (9) | 0.0218 (8) | 0.0250 (8) | 0.0062 (7) | 0.0131 (7) | 0.0065 (7) |
| O7 | 0.0237 (7) | 0.0300 (6) | 0.0214 (6) | −0.0013 (5) | 0.0110 (5) | 0.0004 (5) |
| O8 | 0.0273 (7) | 0.0332 (7) | 0.0261 (6) | −0.0017 (6) | 0.0167 (6) | 0.0013 (5) |
| O9 | 0.0282 (7) | 0.0291 (7) | 0.0359 (7) | −0.0047 (6) | 0.0161 (6) | 0.0014 (6) |
| O10 | 0.0416 (8) | 0.0347 (7) | 0.0305 (7) | −0.0044 (6) | 0.0152 (6) | −0.0049 (6) |
| O11 | 0.0399 (8) | 0.0402 (8) | 0.0307 (7) | 0.0046 (6) | 0.0237 (6) | 0.0018 (6) |
| O12 | 0.0269 (7) | 0.0324 (7) | 0.0349 (7) | 0.0026 (6) | 0.0202 (6) | 0.0079 (6) |
| C11 | 0.0199 (9) | 0.0220 (8) | 0.0225 (8) | 0.0073 (7) | 0.0090 (7) | 0.0081 (7) |
| C12 | 0.0223 (9) | 0.0240 (8) | 0.0255 (8) | 0.0077 (7) | 0.0123 (7) | 0.0095 (7) |
| C13 | 0.0234 (9) | 0.0218 (8) | 0.0242 (8) | 0.0072 (7) | 0.0094 (7) | 0.0063 (7) |
| C14 | 0.0243 (9) | 0.0239 (8) | 0.0220 (8) | 0.0075 (7) | 0.0101 (7) | 0.0051 (7) |
| C15 | 0.0223 (9) | 0.0251 (8) | 0.0245 (8) | 0.0096 (7) | 0.0109 (7) | 0.0101 (7) |
| C16 | 0.0197 (8) | 0.0208 (8) | 0.0223 (8) | 0.0060 (7) | 0.0083 (7) | 0.0072 (7) |
| C17 | 0.0219 (9) | 0.0237 (8) | 0.0240 (8) | 0.0051 (7) | 0.0104 (7) | 0.0082 (7) |
| C18 | 0.0273 (10) | 0.0236 (9) | 0.0274 (9) | 0.0054 (8) | 0.0115 (8) | 0.0060 (7) |
| C19 | 0.0242 (9) | 0.0311 (9) | 0.0227 (8) | 0.0092 (8) | 0.0109 (7) | 0.0094 (7) |
| O13 | 0.0374 (8) | 0.0341 (7) | 0.0289 (7) | −0.0054 (6) | 0.0157 (6) | 0.0019 (6) |
| C21 | 0.0262 (9) | 0.0272 (9) | 0.0209 (8) | 0.0011 (7) | 0.0097 (7) | 0.0032 (7) |
| C22 | 0.0236 (9) | 0.0258 (8) | 0.0229 (8) | 0.0040 (7) | 0.0103 (7) | 0.0062 (7) |
| C23 | 0.0336 (10) | 0.0365 (10) | 0.0329 (9) | 0.0138 (8) | 0.0233 (8) | 0.0144 (8) |
| N1 | 0.0233 (8) | 0.0249 (7) | 0.0228 (7) | 0.0023 (6) | 0.0103 (6) | 0.0049 (6) |
| N2 | 0.0223 (8) | 0.0280 (7) | 0.0234 (7) | 0.0022 (6) | 0.0105 (6) | 0.0053 (6) |
| N3 | 0.0239 (8) | 0.0268 (7) | 0.0235 (7) | 0.0055 (6) | 0.0132 (6) | 0.0079 (6) |
| O1—C7 | 1.2182 (19) | O12—C19 | 1.298 (2) |
| O2—C7 | 1.3221 (19) | O12—H12 | 0.90 (2) |
| O2—H2 | 0.92 (2) | C11—C12 | 1.390 (2) |
| O3—C8 | 1.2147 (19) | C11—C16 | 1.395 (2) |
| O4—C8 | 1.3217 (19) | C11—C17 | 1.489 (2) |
| O4—H4 | 0.88 (2) | C12—C13 | 1.391 (2) |
| O5—C9 | 1.2065 (19) | C12—H12A | 0.9400 |
| O6—C9 | 1.3204 (19) | C13—C14 | 1.388 (2) |
| O6—H6 | 0.91 (2) | C13—C18 | 1.497 (2) |
| C1—C2 | 1.390 (2) | C14—C15 | 1.389 (2) |
| C1—C6 | 1.391 (2) | C14—H14A | 0.9400 |
| C1—C7 | 1.492 (2) | C15—C16 | 1.395 (2) |
| C2—C3 | 1.393 (2) | C15—C19 | 1.494 (2) |
| C2—H2A | 0.9400 | C16—H16A | 0.9400 |
| C3—C4 | 1.395 (2) | O13—H13A | 0.91 (2) |
| C3—C8 | 1.491 (2) | O13—H13B | 0.85 (3) |
| C4—C5 | 1.394 (2) | C21—N2 | 1.300 (2) |
| C4—H4A | 0.9400 | C21—N3 | 1.353 (2) |
| C5—C6 | 1.393 (2) | C21—H21A | 0.9400 |
| C5—C9 | 1.489 (2) | C22—N1 | 1.306 (2) |
| C6—H6A | 0.9400 | C22—N3 | 1.358 (2) |
| O7—C17 | 1.3090 (19) | C22—H22A | 0.9400 |
| O7—H7 | 0.96 (2) | C23—N3 | 1.472 (2) |
| O8—C17 | 1.2230 (18) | C23—C23i | 1.513 (3) |
| O9—C18 | 1.304 (2) | C23—H23A | 0.9800 |
| O9—H9 | 0.91 (3) | C23—H23B | 0.9800 |
| O10—C18 | 1.210 (2) | N1—N2 | 1.3784 (18) |
| O11—C19 | 1.2201 (19) | ||
| C7—O2—H2 | 110.6 (13) | C14—C13—C12 | 119.73 (15) |
| C8—O4—H4 | 107.2 (13) | C14—C13—C18 | 119.44 (14) |
| C9—O6—H6 | 112.6 (13) | C12—C13—C18 | 120.83 (14) |
| C2—C1—C6 | 119.32 (14) | C13—C14—C15 | 120.10 (15) |
| C2—C1—C7 | 120.95 (14) | C13—C14—H14A | 120.0 |
| C6—C1—C7 | 119.73 (14) | C15—C14—H14A | 120.0 |
| C1—C2—C3 | 120.72 (14) | C14—C15—C16 | 120.34 (14) |
| C1—C2—H2A | 119.6 | C14—C15—C19 | 117.53 (14) |
| C3—C2—H2A | 119.6 | C16—C15—C19 | 122.06 (15) |
| C2—C3—C4 | 119.85 (14) | C15—C16—C11 | 119.51 (15) |
| C2—C3—C8 | 117.56 (14) | C15—C16—H16A | 120.2 |
| C4—C3—C8 | 122.59 (14) | C11—C16—H16A | 120.2 |
| C5—C4—C3 | 119.53 (14) | O8—C17—O7 | 122.24 (14) |
| C5—C4—H4A | 120.2 | O8—C17—C11 | 122.17 (15) |
| C3—C4—H4A | 120.2 | O7—C17—C11 | 115.59 (13) |
| C6—C5—C4 | 120.21 (14) | O10—C18—O9 | 125.16 (16) |
| C6—C5—C9 | 119.87 (14) | O10—C18—C13 | 121.74 (15) |
| C4—C5—C9 | 119.88 (13) | O9—C18—C13 | 113.10 (14) |
| C1—C6—C5 | 120.34 (14) | O11—C19—O12 | 125.08 (15) |
| C1—C6—H6A | 119.8 | O11—C19—C15 | 120.02 (15) |
| C5—C6—H6A | 119.8 | O12—C19—C15 | 114.90 (14) |
| O1—C7—O2 | 123.19 (14) | H13A—O13—H13B | 110 (2) |
| O1—C7—C1 | 124.36 (15) | N2—C21—N3 | 110.82 (14) |
| O2—C7—C1 | 112.45 (13) | N2—C21—H21A | 124.6 |
| O3—C8—O4 | 123.84 (15) | N3—C21—H21A | 124.6 |
| O3—C8—C3 | 123.02 (14) | N1—C22—N3 | 110.10 (15) |
| O4—C8—C3 | 113.14 (14) | N1—C22—H22A | 124.9 |
| O5—C9—O6 | 122.58 (16) | N3—C22—H22A | 124.9 |
| O5—C9—C5 | 124.55 (15) | N3—C23—C23i | 111.15 (18) |
| O6—C9—C5 | 112.86 (13) | N3—C23—H23A | 109.4 |
| C17—O7—H7 | 107.8 (13) | C23i—C23—H23A | 109.4 |
| C18—O9—H9 | 112.4 (14) | N3—C23—H23B | 109.4 |
| C19—O12—H12 | 113.6 (14) | C23i—C23—H23B | 109.4 |
| C12—C11—C16 | 119.86 (14) | H23A—C23—H23B | 108.0 |
| C12—C11—C17 | 117.73 (14) | C22—N1—N2 | 107.37 (13) |
| C16—C11—C17 | 122.41 (14) | C21—N2—N1 | 106.94 (13) |
| C11—C12—C13 | 120.45 (14) | C21—N3—C22 | 104.77 (13) |
| C11—C12—H12A | 119.8 | C21—N3—C23 | 127.89 (14) |
| C13—C12—H12A | 119.8 | C22—N3—C23 | 127.25 (14) |
| H··· | ||||
| O2—H2···O11ii | 0.92 (2) | 1.67 (2) | 2.594 (2) | 175 (2) |
| O4—H4···O8 | 0.88 (2) | 1.75 (2) | 2.626 (2) | 174 (2) |
| O6—H6···O1iii | 0.91 (2) | 1.84 (2) | 2.699 (2) | 157 (2) |
| O7—H7···N1 | 0.96 (2) | 1.75 (2) | 2.703 (2) | 172 (2) |
| O9—H9···O13 | 0.91 (3) | 1.63 (3) | 2.531 (2) | 170 (2) |
| O12—H12···N2iv | 0.90 (2) | 1.76 (2) | 2.644 (2) | 167 (2) |
| O13—H13A···O10v | 0.91 (2) | 1.81 (3) | 2.711 (2) | 171 (2) |
| O13—H13B···O5 | 0.85 (3) | 1.92 (3) | 2.751 (2) | 167 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2⋯O11i | 0.92 (2) | 1.67 (2) | 2.594 (2) | 175 (2) |
| O4—H4⋯O8 | 0.88 (2) | 1.75 (2) | 2.626 (2) | 174 (2) |
| O6—H6⋯O1ii | 0.91 (2) | 1.84 (2) | 2.699 (2) | 157 (2) |
| O7—H7⋯N1 | 0.96 (2) | 1.75 (2) | 2.703 (2) | 172 (2) |
| O9—H9⋯O13 | 0.91 (3) | 1.63 (3) | 2.531 (2) | 170 (2) |
| O12—H12⋯N2iii | 0.90 (2) | 1.76 (2) | 2.644 (2) | 167 (2) |
| O13—H13 | 0.91 (2) | 1.81 (3) | 2.711 (2) | 171 (2) |
| O13—H13 | 0.85 (3) | 1.92 (3) | 2.751 (2) | 167 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .