| Literature DB >> 21582809 |
Ozden Ozel Güven, Taner Erdoğan, Simon J Coles, Tuncer Hökelek.
Abstract
In the mol-ecule of the title compound, C(16)H(17)N(3)O(2), the planar benzimidazole ring system [maximum deviation = 0.013 (1) Å] is oriented at a dihedral angle of 75.32 (4)° with respect to the furan ring. An intra-molecular C-H⋯O inter-action results in the formation of a planar six-membered ring [maximum deviation = 0.019 (15) Å], which is oriented at a dihedral angle of 1.91 (3)° with respect to the adjacent furan ring. In the crystal structure, inter-molecular C-H⋯N inter-actions link the mol-ecules into centrosymmetric R(2) (2)(18) dimers. In addition, the structure is stabilized by π-π contacts between the imidazole rings [centroid-centroid distance = 3.5307 (8) Å] and weak C-H⋯π inter-actions.Entities:
Year: 2009 PMID: 21582809 PMCID: PMC2969417 DOI: 10.1107/S1600536809020844
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H17N3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3395 reflections |
| θ = 2.9–27.5° | |
| µ = 0.09 mm−1 | |
| β = 111.354 (1)° | Block, pale yellow |
| 0.50 × 0.35 × 0.35 mm | |
| Bruker–Nonius Kappa CCD diffractometer | 3344 independent reflections |
| Radiation source: fine-focus sealed tube | 2755 reflections with |
| graphite | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 27.5°, θmin = 2.9° |
| φ & ω scans | |
| Absorption correction: multi-scan ( | |
| 19714 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| (Δ/σ)max = 0.001 | |
| 3344 reflections | Δρmax = 0.37 e Å−3 |
| 259 parameters | Δρmin = −0.36 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.065 (5) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.43354 (11) | 0.47469 (5) | 0.69234 (9) | 0.0210 (2) | |
| O2 | 0.62124 (10) | 0.35487 (5) | 0.44862 (9) | 0.0215 (2) | |
| N1 | 0.81649 (13) | 0.45397 (6) | 0.87655 (10) | 0.0191 (2) | |
| N2 | 0.81640 (14) | 0.44200 (6) | 1.09515 (11) | 0.0234 (3) | |
| N3 | 0.73483 (13) | 0.39962 (6) | 0.55091 (11) | 0.0203 (2) | |
| C1 | 0.75737 (16) | 0.47823 (7) | 0.97642 (13) | 0.0226 (3) | |
| H1 | 0.680 (2) | 0.5192 (8) | 0.9590 (16) | 0.025 (4)* | |
| C2 | 0.92279 (15) | 0.38916 (7) | 1.07227 (12) | 0.0196 (3) | |
| C3 | 1.01939 (16) | 0.33471 (7) | 1.16205 (13) | 0.0229 (3) | |
| H3 | 1.016 (2) | 0.3284 (9) | 1.2569 (17) | 0.034 (4)* | |
| C4 | 1.11688 (16) | 0.28954 (7) | 1.11299 (14) | 0.0250 (3) | |
| H4 | 1.185 (2) | 0.2500 (9) | 1.1699 (17) | 0.035 (4)* | |
| C5 | 1.11963 (16) | 0.29780 (7) | 0.97705 (14) | 0.0249 (3) | |
| H5 | 1.192 (2) | 0.2655 (9) | 0.9461 (16) | 0.033 (4)* | |
| C6 | 1.02292 (16) | 0.35075 (7) | 0.88540 (13) | 0.0223 (3) | |
| H6 | 1.0243 (19) | 0.3573 (8) | 0.7909 (16) | 0.026 (4)* | |
| C7 | 0.92492 (15) | 0.39601 (6) | 0.93600 (12) | 0.0180 (3) | |
| C8 | 0.77611 (17) | 0.48381 (7) | 0.73516 (13) | 0.0209 (3) | |
| H81 | 0.8843 (18) | 0.4894 (8) | 0.7176 (14) | 0.018 (3)* | |
| H82 | 0.7235 (19) | 0.5324 (8) | 0.7319 (15) | 0.021 (4)* | |
| C9 | 0.65977 (15) | 0.43432 (6) | 0.62241 (12) | 0.0177 (3) | |
| C10 | 0.48021 (15) | 0.42984 (6) | 0.60389 (12) | 0.0176 (3) | |
| C11 | 0.34138 (16) | 0.39130 (7) | 0.52080 (13) | 0.0195 (3) | |
| H11 | 0.3406 (18) | 0.3571 (8) | 0.4478 (15) | 0.024 (4)* | |
| C12 | 0.20149 (17) | 0.41338 (7) | 0.55880 (14) | 0.0228 (3) | |
| H12 | 0.081 (2) | 0.3957 (8) | 0.5195 (16) | 0.027 (4)* | |
| C13 | 0.26348 (17) | 0.46348 (7) | 0.66207 (13) | 0.0233 (3) | |
| H13 | 0.2152 (18) | 0.4915 (8) | 0.7179 (15) | 0.021 (3)* | |
| C14 | 0.71245 (17) | 0.31673 (8) | 0.37379 (15) | 0.0269 (3) | |
| H141 | 0.813 (2) | 0.2925 (9) | 0.4441 (17) | 0.032 (4)* | |
| H142 | 0.749 (2) | 0.3531 (9) | 0.3176 (17) | 0.034 (4)* | |
| C15 | 0.59066 (18) | 0.26057 (8) | 0.28123 (14) | 0.0278 (3) | |
| H151 | 0.650 (2) | 0.2349 (10) | 0.2257 (17) | 0.040 (4)* | |
| H152 | 0.493 (2) | 0.2866 (9) | 0.2113 (18) | 0.040 (5)* | |
| C16 | 0.52829 (18) | 0.20602 (8) | 0.36374 (15) | 0.0287 (3) | |
| H161 | 0.624 (2) | 0.1794 (10) | 0.4348 (19) | 0.048 (5)* | |
| H162 | 0.468 (2) | 0.2317 (9) | 0.4205 (16) | 0.036 (4)* | |
| H163 | 0.449 (2) | 0.1687 (10) | 0.3015 (19) | 0.047 (5)* |
| O1 | 0.0239 (5) | 0.0207 (4) | 0.0187 (4) | 0.0014 (3) | 0.0082 (4) | −0.0027 (3) |
| O2 | 0.0178 (4) | 0.0252 (5) | 0.0212 (4) | −0.0019 (3) | 0.0069 (4) | −0.0078 (4) |
| N1 | 0.0206 (5) | 0.0191 (5) | 0.0163 (5) | −0.0009 (4) | 0.0052 (4) | −0.0009 (4) |
| N2 | 0.0248 (6) | 0.0258 (6) | 0.0187 (5) | 0.0015 (4) | 0.0066 (4) | −0.0034 (4) |
| N3 | 0.0201 (5) | 0.0212 (5) | 0.0169 (5) | −0.0026 (4) | 0.0036 (4) | −0.0013 (4) |
| C1 | 0.0234 (6) | 0.0223 (6) | 0.0213 (6) | 0.0001 (5) | 0.0070 (5) | −0.0053 (5) |
| C2 | 0.0179 (6) | 0.0221 (6) | 0.0173 (6) | −0.0037 (5) | 0.0047 (5) | −0.0036 (5) |
| C3 | 0.0202 (6) | 0.0275 (7) | 0.0185 (6) | −0.0021 (5) | 0.0041 (5) | 0.0012 (5) |
| C4 | 0.0191 (6) | 0.0252 (7) | 0.0261 (7) | 0.0017 (5) | 0.0026 (5) | 0.0025 (5) |
| C5 | 0.0187 (6) | 0.0264 (7) | 0.0293 (7) | 0.0016 (5) | 0.0083 (5) | −0.0036 (5) |
| C6 | 0.0200 (6) | 0.0266 (6) | 0.0212 (6) | −0.0027 (5) | 0.0086 (5) | −0.0022 (5) |
| C7 | 0.0155 (5) | 0.0188 (6) | 0.0178 (6) | −0.0035 (4) | 0.0036 (5) | −0.0016 (4) |
| C8 | 0.0238 (6) | 0.0200 (6) | 0.0165 (6) | −0.0042 (5) | 0.0045 (5) | 0.0009 (5) |
| C9 | 0.0206 (6) | 0.0161 (6) | 0.0150 (6) | −0.0009 (4) | 0.0050 (5) | 0.0029 (4) |
| C10 | 0.0229 (6) | 0.0157 (5) | 0.0146 (5) | 0.0013 (4) | 0.0074 (5) | 0.0010 (4) |
| C11 | 0.0219 (6) | 0.0185 (6) | 0.0181 (6) | −0.0005 (5) | 0.0073 (5) | −0.0001 (5) |
| C12 | 0.0216 (6) | 0.0240 (6) | 0.0237 (6) | 0.0010 (5) | 0.0093 (5) | 0.0018 (5) |
| C13 | 0.0235 (6) | 0.0257 (6) | 0.0235 (6) | 0.0045 (5) | 0.0116 (5) | 0.0020 (5) |
| C14 | 0.0212 (7) | 0.0350 (7) | 0.0277 (7) | 0.0011 (6) | 0.0128 (6) | −0.0079 (6) |
| C15 | 0.0249 (7) | 0.0354 (8) | 0.0232 (6) | 0.0032 (6) | 0.0087 (6) | −0.0095 (6) |
| C16 | 0.0258 (7) | 0.0267 (7) | 0.0305 (7) | 0.0041 (6) | 0.0067 (6) | −0.0070 (6) |
| O1—C10 | 1.3787 (14) | C6—H6 | 0.978 (15) |
| O1—C13 | 1.3652 (16) | C8—H81 | 0.996 (14) |
| O2—N3 | 1.3952 (13) | C8—H82 | 0.987 (15) |
| O2—C14 | 1.4447 (15) | C9—C8 | 1.5105 (16) |
| N1—C1 | 1.3625 (16) | C9—C10 | 1.4553 (16) |
| N1—C7 | 1.3847 (15) | C11—C10 | 1.3635 (17) |
| N1—C8 | 1.4643 (15) | C11—C12 | 1.4257 (17) |
| N2—C1 | 1.3110 (17) | C11—H11 | 0.971 (15) |
| N2—C2 | 1.3927 (16) | C12—H12 | 0.999 (16) |
| N3—C9 | 1.2927 (16) | C13—C12 | 1.3499 (19) |
| C1—H1 | 0.963 (15) | C13—H13 | 0.959 (15) |
| C2—C3 | 1.3956 (18) | C14—H141 | 0.994 (16) |
| C2—C7 | 1.4055 (17) | C14—H142 | 0.999 (17) |
| C3—H3 | 0.987 (16) | C15—C14 | 1.5136 (19) |
| C4—C3 | 1.3800 (18) | C15—C16 | 1.517 (2) |
| C4—C5 | 1.4066 (19) | C15—H151 | 0.999 (17) |
| C4—H4 | 0.973 (17) | C15—H152 | 0.994 (18) |
| C5—H5 | 0.982 (16) | C16—H161 | 0.993 (19) |
| C6—C5 | 1.3854 (18) | C16—H162 | 1.015 (17) |
| C6—C7 | 1.3933 (17) | C16—H163 | 1.001 (19) |
| C13—O1—C10 | 106.73 (9) | N3—C9—C10 | 126.66 (11) |
| N3—O2—C14 | 109.14 (9) | N3—C9—C8 | 114.21 (11) |
| C1—N1—C7 | 106.35 (10) | C10—C9—C8 | 119.13 (10) |
| C1—N1—C8 | 127.02 (11) | C11—C10—O1 | 109.32 (10) |
| C7—N1—C8 | 126.62 (10) | C11—C10—C9 | 136.37 (11) |
| C1—N2—C2 | 104.12 (10) | O1—C10—C9 | 114.31 (10) |
| C9—N3—O2 | 111.61 (10) | C10—C11—C12 | 106.84 (11) |
| N1—C1—H1 | 121.3 (9) | C10—C11—H11 | 125.1 (9) |
| N2—C1—N1 | 114.29 (11) | C12—C11—H11 | 128.0 (9) |
| N2—C1—H1 | 124.4 (9) | C13—C12—C11 | 106.40 (11) |
| N2—C2—C3 | 129.71 (11) | C13—C12—H12 | 125.5 (9) |
| N2—C2—C7 | 110.24 (11) | C11—C12—H12 | 128.1 (9) |
| C3—C2—C7 | 120.05 (11) | C12—C13—O1 | 110.70 (11) |
| C4—C3—C2 | 117.87 (11) | C12—C13—H13 | 134.4 (9) |
| C4—C3—H3 | 121.4 (10) | O1—C13—H13 | 114.9 (9) |
| C2—C3—H3 | 120.7 (10) | O2—C14—C15 | 106.74 (10) |
| C3—C4—C5 | 121.40 (12) | O2—C14—H142 | 108.7 (9) |
| C3—C4—H4 | 121.7 (9) | C15—C14—H142 | 111.9 (9) |
| C5—C4—H4 | 116.9 (9) | O2—C14—H141 | 108.0 (9) |
| C6—C5—C4 | 121.75 (12) | C15—C14—H141 | 110.9 (9) |
| C6—C5—H5 | 118.9 (9) | H142—C14—H141 | 110.5 (13) |
| C4—C5—H5 | 119.4 (9) | C14—C15—C16 | 112.93 (11) |
| C5—C6—C7 | 116.36 (11) | C14—C15—H151 | 107.9 (10) |
| C5—C6—H6 | 122.6 (9) | C16—C15—H151 | 110.7 (10) |
| C7—C6—H6 | 121.1 (9) | C14—C15—H152 | 108.7 (10) |
| N1—C7—C6 | 132.42 (11) | C16—C15—H152 | 110.5 (10) |
| N1—C7—C2 | 105.01 (10) | H151—C15—H152 | 105.7 (13) |
| C6—C7—C2 | 122.57 (11) | C15—C16—H161 | 112.0 (10) |
| N1—C8—C9 | 112.58 (9) | C15—C16—H162 | 111.2 (9) |
| N1—C8—H81 | 108.5 (8) | H161—C16—H162 | 104.4 (13) |
| C9—C8—H81 | 107.8 (8) | C15—C16—H163 | 112.1 (10) |
| N1—C8—H82 | 108.0 (8) | H161—C16—H163 | 107.8 (15) |
| C9—C8—H82 | 110.7 (9) | H162—C16—H163 | 108.8 (14) |
| H81—C8—H82 | 109.2 (12) | ||
| C13—O1—C10—C11 | −0.29 (13) | N2—C2—C7—N1 | −0.36 (13) |
| C13—O1—C10—C9 | −179.60 (10) | C3—C2—C7—N1 | 179.63 (11) |
| C10—O1—C13—C12 | 0.20 (13) | N2—C2—C7—C6 | 179.04 (11) |
| C14—O2—N3—C9 | −179.10 (10) | C3—C2—C7—C6 | −0.97 (18) |
| N3—O2—C14—C15 | 171.16 (10) | C5—C4—C3—C2 | 0.06 (19) |
| C7—N1—C1—N2 | 0.07 (15) | C3—C4—C5—C6 | −1.0 (2) |
| C8—N1—C1—N2 | −179.00 (11) | C7—C6—C5—C4 | 0.93 (18) |
| C1—N1—C7—C6 | −179.14 (13) | C5—C6—C7—N1 | 179.26 (12) |
| C8—N1—C7—C6 | −0.1 (2) | C5—C6—C7—C2 | 0.05 (18) |
| C1—N1—C7—C2 | 0.18 (13) | N3—C9—C8—N1 | −106.07 (12) |
| C8—N1—C7—C2 | 179.25 (11) | C10—C9—C8—N1 | 73.98 (14) |
| C1—N1—C8—C9 | −107.61 (14) | N3—C9—C10—C11 | 2.8 (2) |
| C7—N1—C8—C9 | 73.51 (15) | C8—C9—C10—C11 | −177.25 (13) |
| C2—N2—C1—N1 | −0.28 (14) | N3—C9—C10—O1 | −178.13 (11) |
| C1—N2—C2—C3 | −179.59 (13) | C8—C9—C10—O1 | 1.81 (15) |
| C1—N2—C2—C7 | 0.39 (13) | C12—C11—C10—O1 | 0.26 (13) |
| O2—N3—C9—C10 | −0.07 (16) | C12—C11—C10—C9 | 179.35 (13) |
| O2—N3—C9—C8 | 179.98 (9) | C10—C11—C12—C13 | −0.13 (14) |
| N2—C2—C3—C4 | −179.13 (12) | O1—C13—C12—C11 | −0.04 (14) |
| C7—C2—C3—C4 | 0.89 (18) | C16—C15—C14—O2 | −59.43 (15) |
| H··· | ||||
| C11—H11···O2 | 0.97 (2) | 2.359 (16) | 2.7930 (17) | 106 (1) |
| C13—H13···N2i | 0.96 (2) | 2.360 (15) | 3.2872 (17) | 162 (1) |
| C14—H141···Cg1ii | 0.99 (2) | 2.968 (17) | 3.8346 (16) | 146 (1) |
| C16—H161···Cg2ii | 0.99 (2) | 2.685 (18) | 3.5644 (16) | 148 (1) |
| C16—H163···Cg3ii | 1.00 (2) | 2.643 (18) | 3.5901 (15) | 157 (1) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C11—H11⋯O2 | 0.97 (2) | 2.359 (16) | 2.7930 (17) | 106 (1) |
| C13—H13⋯N2i | 0.96 (2) | 2.360 (15) | 3.2872 (17) | 162 (1) |
| C14—H141⋯ | 0.99 (2) | 2.968 (17) | 3.8346 (16) | 146 (1) |
| C16—H161⋯ | 0.99 (2) | 2.685 (18) | 3.5644 (16) | 148 (1) |
| C16—H163⋯ | 1.00 (2) | 2.643 (18) | 3.5901 (15) | 157 (1) |
Symmetry codes: (i) ; (ii) . Cg1, Cg2 and Cg3 are the centroids of the C2–C7, N1/N2/C1/C2/C7 and O1/C10–C13 rings, respectively.