| Literature DB >> 21582608 |
Tingting Zhang1, Tao Zhang, Yingtao Ren, Hongze Liang.
Abstract
In the title compound, C(10)H(10)N(4)O(4), the two imidazole rings adopt a trans conformation and are inclined to one another at a dihedral angle of 55.64 (4)°. In the crystal structure, mol-ecules are linked by inter-molecular O-H⋯N hydrogen bonds into chains running parallel to [010] and layers are formed from these by inter-molecular C-H⋯O hydrogen bonds. Additional C-H⋯O hydrogen bonds produce a three-dimensional network.Entities:
Year: 2009 PMID: 21582608 PMCID: PMC2968835 DOI: 10.1107/S1600536809010897
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H10N4O4 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 17425 reflections |
| θ = 3.1–27.5° | |
| µ = 0.12 mm−1 | |
| Prism, colorless | |
| 0.51 × 0.27 × 0.2 mm |
| Rigaku R-AXIS RAPID diffractometer | 2436 independent reflections |
| Radiation source: fine-focus sealed tube | 2159 reflections with |
| graphite | |
| Detector resolution: 0 pixels mm-1 | θmax = 27.5°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 18907 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2436 reflections | (Δ/σ)max < 0.001 |
| 163 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.09214 (10) | 0.31447 (5) | 0.31089 (5) | 0.01700 (19) | |
| H1 | 0.1441 | 0.2674 | 0.2969 | 0.050* | |
| O2 | 0.21420 (10) | 0.38341 (5) | 0.20945 (5) | 0.01586 (18) | |
| O4 | 0.24120 (10) | 0.83984 (6) | 0.49664 (5) | 0.01865 (19) | |
| N3 | 0.11682 (11) | 0.68000 (6) | 0.44503 (5) | 0.0121 (2) | |
| O3 | 0.10682 (10) | 0.91340 (5) | 0.40169 (5) | 0.01702 (19) | |
| H10 | 0.1596 | 0.9575 | 0.4189 | 0.050* | |
| C5 | 0.12876 (13) | 0.38415 (7) | 0.26763 (6) | 0.0124 (2) | |
| N1 | 0.11865 (11) | 0.54801 (6) | 0.26858 (5) | 0.0123 (2) | |
| N2 | 0.23979 (12) | 0.67789 (6) | 0.26608 (5) | 0.0145 (2) | |
| N4 | 0.23766 (12) | 0.55062 (6) | 0.44669 (6) | 0.0148 (2) | |
| C6 | 0.18459 (13) | 0.61528 (7) | 0.40021 (6) | 0.0121 (2) | |
| C8 | 0.12794 (14) | 0.65457 (7) | 0.52369 (6) | 0.0147 (2) | |
| H7 | 0.0916 | 0.6857 | 0.5681 | 0.018* | |
| C10 | 0.14467 (13) | 0.84266 (7) | 0.44296 (6) | 0.0127 (2) | |
| C1 | 0.18552 (13) | 0.61380 (7) | 0.31285 (6) | 0.0120 (2) | |
| C4 | 0.04544 (14) | 0.46687 (7) | 0.29809 (7) | 0.0146 (2) | |
| H3 | −0.0647 | 0.4654 | 0.2814 | 0.017* | |
| H2 | 0.0477 | 0.4670 | 0.3562 | 0.017* | |
| C9 | 0.04736 (13) | 0.76275 (7) | 0.41703 (7) | 0.0137 (2) | |
| H9 | −0.0594 | 0.7682 | 0.4381 | 0.016* | |
| H8 | 0.0405 | 0.7617 | 0.3591 | 0.016* | |
| C3 | 0.13028 (14) | 0.57281 (7) | 0.18970 (6) | 0.0148 (2) | |
| H4 | 0.0941 | 0.5413 | 0.1455 | 0.018* | |
| C7 | 0.20265 (14) | 0.57488 (8) | 0.52384 (7) | 0.0159 (2) | |
| H6 | 0.2264 | 0.5419 | 0.5693 | 0.019* | |
| C2 | 0.20507 (14) | 0.65256 (8) | 0.18896 (7) | 0.0154 (2) | |
| H5 | 0.2291 | 0.6850 | 0.1432 | 0.019* |
| O1 | 0.0212 (4) | 0.0099 (4) | 0.0199 (4) | 0.0007 (3) | 0.0056 (3) | 0.0007 (3) |
| O2 | 0.0179 (4) | 0.0146 (4) | 0.0151 (4) | 0.0005 (3) | 0.0031 (3) | −0.0006 (3) |
| O4 | 0.0233 (4) | 0.0155 (4) | 0.0172 (4) | −0.0035 (3) | −0.0063 (3) | 0.0016 (3) |
| N3 | 0.0147 (4) | 0.0096 (4) | 0.0120 (4) | 0.0001 (4) | −0.0002 (3) | −0.0005 (3) |
| O3 | 0.0196 (4) | 0.0103 (4) | 0.0212 (4) | −0.0015 (3) | −0.0053 (3) | 0.0019 (3) |
| C5 | 0.0118 (5) | 0.0114 (5) | 0.0140 (5) | −0.0021 (4) | −0.0025 (4) | −0.0014 (4) |
| N1 | 0.0143 (4) | 0.0092 (4) | 0.0134 (4) | −0.0002 (4) | 0.0011 (3) | −0.0010 (3) |
| N2 | 0.0187 (5) | 0.0116 (4) | 0.0131 (5) | −0.0011 (4) | 0.0000 (4) | 0.0015 (3) |
| N4 | 0.0184 (5) | 0.0121 (4) | 0.0138 (4) | 0.0022 (4) | 0.0008 (4) | 0.0017 (3) |
| C6 | 0.0141 (5) | 0.0092 (5) | 0.0132 (5) | −0.0008 (4) | 0.0002 (4) | 0.0000 (4) |
| C8 | 0.0178 (5) | 0.0154 (5) | 0.0108 (5) | −0.0012 (4) | 0.0012 (4) | 0.0001 (4) |
| C10 | 0.0140 (5) | 0.0118 (5) | 0.0124 (5) | 0.0008 (4) | 0.0023 (4) | −0.0009 (4) |
| C1 | 0.0137 (5) | 0.0087 (5) | 0.0135 (5) | 0.0009 (4) | 0.0001 (4) | −0.0004 (4) |
| C4 | 0.0151 (5) | 0.0102 (5) | 0.0184 (5) | −0.0023 (4) | 0.0034 (4) | −0.0010 (4) |
| C9 | 0.0152 (5) | 0.0098 (5) | 0.0160 (5) | 0.0017 (4) | −0.0016 (4) | 0.0000 (4) |
| C3 | 0.0168 (5) | 0.0154 (5) | 0.0122 (5) | 0.0020 (4) | −0.0005 (4) | −0.0020 (4) |
| C7 | 0.0198 (5) | 0.0162 (5) | 0.0118 (5) | −0.0003 (4) | 0.0007 (4) | 0.0024 (4) |
| C2 | 0.0191 (5) | 0.0153 (5) | 0.0119 (5) | 0.0007 (4) | 0.0002 (4) | 0.0012 (4) |
| O1—C5 | 1.3140 (13) | N4—C6 | 1.3260 (14) |
| O1—H1 | 0.8677 | N4—C7 | 1.3718 (14) |
| O2—C5 | 1.2098 (14) | C6—C1 | 1.4592 (15) |
| O4—C10 | 1.2117 (14) | C8—C7 | 1.3594 (17) |
| N3—C6 | 1.3579 (14) | C8—H7 | 0.9300 |
| N3—C8 | 1.3720 (14) | C10—C9 | 1.5230 (15) |
| N3—C9 | 1.4583 (13) | C4—H3 | 0.9700 |
| O3—C10 | 1.3116 (13) | C4—H2 | 0.9700 |
| O3—H10 | 0.8513 | C9—H9 | 0.9700 |
| C5—C4 | 1.5217 (15) | C9—H8 | 0.9700 |
| N1—C1 | 1.3614 (14) | C3—C2 | 1.3605 (17) |
| N1—C3 | 1.3733 (14) | C3—H4 | 0.9300 |
| N1—C4 | 1.4589 (14) | C7—H6 | 0.9300 |
| N2—C1 | 1.3259 (14) | C2—H5 | 0.9300 |
| N2—C2 | 1.3752 (14) | ||
| C5—O1—H1 | 113.0 | N2—C1—C6 | 125.43 (10) |
| C6—N3—C8 | 107.30 (9) | N1—C1—C6 | 123.50 (10) |
| C6—N3—C9 | 127.61 (9) | N1—C4—C5 | 112.49 (9) |
| C8—N3—C9 | 125.08 (9) | N1—C4—H3 | 109.1 |
| C10—O3—H10 | 109.5 | C5—C4—H3 | 109.1 |
| O2—C5—O1 | 125.04 (10) | N1—C4—H2 | 109.1 |
| O2—C5—C4 | 123.44 (10) | C5—C4—H2 | 109.1 |
| O1—C5—C4 | 111.49 (9) | H3—C4—H2 | 107.8 |
| C1—N1—C3 | 106.98 (9) | N3—C9—C10 | 111.88 (9) |
| C1—N1—C4 | 127.30 (9) | N3—C9—H9 | 109.2 |
| C3—N1—C4 | 125.72 (9) | C10—C9—H9 | 109.2 |
| C1—N2—C2 | 105.96 (9) | N3—C9—H8 | 109.2 |
| C6—N4—C7 | 106.27 (9) | C10—C9—H8 | 109.2 |
| N4—C6—N3 | 110.50 (10) | H9—C9—H8 | 107.9 |
| N4—C6—C1 | 124.91 (10) | C2—C3—N1 | 106.48 (9) |
| N3—C6—C1 | 124.37 (10) | C2—C3—H4 | 126.8 |
| C7—C8—N3 | 106.36 (9) | N1—C3—H4 | 126.8 |
| C7—C8—H7 | 126.8 | C8—C7—N4 | 109.57 (10) |
| N3—C8—H7 | 126.8 | C8—C7—H6 | 125.2 |
| O4—C10—O3 | 125.52 (10) | N4—C7—H6 | 125.2 |
| O4—C10—C9 | 122.99 (10) | C3—C2—N2 | 109.69 (10) |
| O3—C10—C9 | 111.47 (9) | C3—C2—H5 | 125.2 |
| N2—C1—N1 | 110.89 (9) | N2—C2—H5 | 125.2 |
| H··· | ||||
| O1—H1···N2i | 0.87 | 1.75 | 2.6137 (13) | 176 |
| O3—H10···N4ii | 0.85 | 1.72 | 2.5666 (13) | 176 |
| C4—H2···N4 | 0.97 | 2.54 | 3.2234 (17) | 127 |
| C4—H3···O2iii | 0.97 | 2.24 | 3.0675 (16) | 142 |
| C2—H5···O4iv | 0.93 | 2.48 | 3.2286 (16) | 138 |
| C8—H7···O1v | 0.93 | 2.55 | 3.3610 (15) | 146 |
| C9—H8···N2 | 0.97 | 2.62 | 3.2611 (16) | 124 |
| C9—H9···O4vi | 0.97 | 2.59 | 3.3391 (15) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N2i | 0.87 | 1.75 | 2.6137 (13) | 176 |
| O3—H10⋯N4ii | 0.85 | 1.72 | 2.5666 (13) | 176 |
| C4—H2⋯N4 | 0.97 | 2.54 | 3.2234 (17) | 127 |
| C4—H3⋯O2iii | 0.97 | 2.24 | 3.0675 (16) | 142 |
| C2—H5⋯O4iv | 0.93 | 2.48 | 3.2286 (16) | 138 |
| C8—H7⋯O1v | 0.93 | 2.55 | 3.3610 (15) | 146 |
| C9—H8⋯N2 | 0.97 | 2.62 | 3.2611 (16) | 124 |
| C9—H9⋯O4vi | 0.97 | 2.59 | 3.3391 (15) | 135 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .