| Literature DB >> 21582593 |
Jian Zhang, Lin-Ping Wu, Ling-Hua Zhuang, Guo-Wei Wang.
Abstract
The title compound, C(9)H(11)N(3)OS, was prepared by the reaction of 3-methoxy-benzaldehyde and thio-semicarbazide. The benzyl-idene ring and the thio-semicarbazone fragment are slightly twisted, making a dihedral angle of 14.1 (1)°. A weak intra-molecular N-H⋯N hydrogen bond may influence the conformation of the mol-ecule. Inter-molecular N-H⋯S hydrogen bonds build up a three-dimensional network.Entities:
Year: 2009 PMID: 21582593 PMCID: PMC2968893 DOI: 10.1107/S160053680901040X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11N3OS | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 27 reflections |
| θ = 1–25° | |
| µ = 0.29 mm−1 | |
| β = 90.29 (3)° | Block, colorless |
| 0.30 × 0.20 × 0.10 mm | |
| Enraf–Nonius CAD-4 diffractometer | 1494 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.3°, θmin = 1.7° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 1946 measured reflections | 3 standard reflections every 200 reflections |
| 1852 independent reflections | intensity decay: 9% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1852 reflections | (Δ/σ)max < 0.001 |
| 128 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.51511 (6) | 1.47619 (10) | 0.35880 (3) | 0.0442 (2) | |
| O1 | 0.85492 (14) | 0.6407 (3) | 0.83956 (9) | 0.0496 (5) | |
| N1 | 0.66878 (15) | 1.0213 (3) | 0.50804 (11) | 0.0369 (4) | |
| N2 | 0.60984 (16) | 1.2149 (3) | 0.47967 (11) | 0.0407 (5) | |
| H2 | 0.5936 | 1.3268 | 0.5155 | 0.049* | |
| N3 | 0.59915 (18) | 1.0451 (4) | 0.34546 (12) | 0.0497 (5) | |
| H3A | 0.6324 | 0.9237 | 0.3674 | 0.060* | |
| H3B | 0.5800 | 1.0463 | 0.2910 | 0.060* | |
| C1 | 0.9085 (2) | 0.4449 (6) | 0.88050 (16) | 0.0614 (8) | |
| H1A | 0.9862 | 0.4377 | 0.8627 | 0.092* | |
| H1B | 0.8706 | 0.3024 | 0.8634 | 0.092* | |
| H1C | 0.9049 | 0.4624 | 0.9430 | 0.092* | |
| C2 | 0.84356 (18) | 0.6327 (4) | 0.75008 (14) | 0.0383 (5) | |
| C3 | 0.77906 (17) | 0.8120 (4) | 0.71427 (13) | 0.0366 (5) | |
| H3 | 0.7479 | 0.9264 | 0.7505 | 0.044* | |
| C4 | 0.76070 (17) | 0.8221 (4) | 0.62447 (13) | 0.0350 (5) | |
| C5 | 0.8097 (2) | 0.6510 (4) | 0.57024 (14) | 0.0428 (6) | |
| H5 | 0.7982 | 0.6566 | 0.5099 | 0.051* | |
| C6 | 0.8741 (2) | 0.4764 (4) | 0.60621 (16) | 0.0503 (6) | |
| H6 | 0.9071 | 0.3642 | 0.5700 | 0.060* | |
| C7 | 0.8914 (2) | 0.4638 (4) | 0.69715 (16) | 0.0472 (6) | |
| H7 | 0.9346 | 0.3430 | 0.7214 | 0.057* | |
| C8 | 0.69256 (18) | 1.0136 (4) | 0.58932 (13) | 0.0379 (5) | |
| H8 | 0.6663 | 1.1311 | 0.6265 | 0.045* | |
| C9 | 0.57769 (17) | 1.2279 (4) | 0.39499 (13) | 0.0332 (5) |
| S1 | 0.0643 (4) | 0.0374 (3) | 0.0309 (3) | 0.0090 (3) | −0.0081 (3) | 0.0035 (2) |
| O1 | 0.0534 (10) | 0.0621 (12) | 0.0333 (8) | 0.0106 (9) | −0.0062 (7) | 0.0109 (8) |
| N1 | 0.0429 (10) | 0.0363 (10) | 0.0315 (9) | 0.0058 (9) | −0.0045 (8) | 0.0024 (8) |
| N2 | 0.0555 (12) | 0.0378 (11) | 0.0286 (9) | 0.0118 (9) | −0.0091 (8) | −0.0020 (8) |
| N3 | 0.0732 (14) | 0.0442 (12) | 0.0315 (9) | 0.0164 (11) | −0.0128 (9) | −0.0056 (9) |
| C1 | 0.0631 (16) | 0.077 (2) | 0.0444 (14) | 0.0194 (15) | −0.0057 (12) | 0.0225 (14) |
| C2 | 0.0335 (11) | 0.0471 (14) | 0.0343 (11) | −0.0031 (10) | −0.0041 (9) | 0.0072 (10) |
| C3 | 0.0338 (11) | 0.0429 (13) | 0.0331 (11) | 0.0020 (10) | 0.0002 (9) | 0.0024 (10) |
| C4 | 0.0331 (11) | 0.0380 (12) | 0.0340 (11) | −0.0035 (10) | −0.0043 (9) | 0.0045 (10) |
| C5 | 0.0526 (14) | 0.0413 (14) | 0.0346 (11) | 0.0013 (11) | −0.0061 (10) | −0.0020 (10) |
| C6 | 0.0622 (16) | 0.0432 (14) | 0.0454 (13) | 0.0109 (12) | −0.0051 (12) | −0.0084 (11) |
| C7 | 0.0517 (14) | 0.0401 (13) | 0.0497 (14) | 0.0076 (11) | −0.0091 (11) | 0.0061 (11) |
| C8 | 0.0389 (11) | 0.0439 (13) | 0.0309 (11) | 0.0039 (10) | −0.0012 (9) | 0.0002 (10) |
| C9 | 0.0372 (11) | 0.0357 (12) | 0.0266 (10) | −0.0032 (10) | −0.0024 (8) | 0.0015 (9) |
| S1—C9 | 1.683 (2) | C2—C7 | 1.377 (3) |
| O1—C2 | 1.371 (2) | C2—C3 | 1.382 (3) |
| O1—C1 | 1.422 (3) | C3—C4 | 1.386 (3) |
| N1—C8 | 1.270 (3) | C3—H3 | 0.9300 |
| N1—N2 | 1.370 (2) | C4—C5 | 1.402 (3) |
| N2—C9 | 1.346 (3) | C4—C8 | 1.454 (3) |
| N2—H2 | 0.8600 | C5—C6 | 1.363 (3) |
| N3—C9 | 1.309 (3) | C5—H5 | 0.9300 |
| N3—H3A | 0.8600 | C6—C7 | 1.402 (3) |
| N3—H3B | 0.8600 | C6—H6 | 0.9300 |
| C1—H1A | 0.9600 | C7—H7 | 0.9300 |
| C1—H1B | 0.9600 | C8—H8 | 0.9300 |
| C1—H1C | 0.9600 | ||
| C2—O1—C1 | 116.9 (2) | C4—C3—H3 | 119.9 |
| C8—N1—N2 | 116.44 (18) | C3—C4—C5 | 119.4 (2) |
| C9—N2—N1 | 119.16 (18) | C3—C4—C8 | 118.6 (2) |
| C9—N2—H2 | 120.4 | C5—C4—C8 | 122.00 (19) |
| N1—N2—H2 | 120.4 | C6—C5—C4 | 119.8 (2) |
| C9—N3—H3A | 120.0 | C6—C5—H5 | 120.1 |
| C9—N3—H3B | 120.0 | C4—C5—H5 | 120.1 |
| H3A—N3—H3B | 120.0 | C5—C6—C7 | 120.9 (2) |
| O1—C1—H1A | 109.5 | C5—C6—H6 | 119.6 |
| O1—C1—H1B | 109.5 | C7—C6—H6 | 119.6 |
| H1A—C1—H1B | 109.5 | C2—C7—C6 | 119.1 (2) |
| O1—C1—H1C | 109.5 | C2—C7—H7 | 120.5 |
| H1A—C1—H1C | 109.5 | C6—C7—H7 | 120.5 |
| H1B—C1—H1C | 109.5 | N1—C8—C4 | 120.3 (2) |
| O1—C2—C7 | 124.6 (2) | N1—C8—H8 | 119.8 |
| O1—C2—C3 | 114.8 (2) | C4—C8—H8 | 119.8 |
| C7—C2—C3 | 120.6 (2) | N3—C9—N2 | 117.1 (2) |
| C2—C3—C4 | 120.2 (2) | N3—C9—S1 | 124.11 (16) |
| C2—C3—H3 | 119.9 | N2—C9—S1 | 118.78 (16) |
| H··· | ||||
| N2—H2···S1i | 0.86 | 2.57 | 3.370 (2) | 156 |
| N3—H3B···S1ii | 0.86 | 2.57 | 3.411 (2) | 166 |
| N3—H3A···N1 | 0.86 | 2.25 | 2.611 (3) | 105 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯S1i | 0.86 | 2.57 | 3.370 (2) | 156 |
| N3—H3 | 0.86 | 2.57 | 3.411 (2) | 166 |
| N3—H3 | 0.86 | 2.25 | 2.611 (3) | 105 |
Symmetry codes: (i) ; (ii) .