Literature DB >> 21582593

3-Methoxy-benzaldehyde thio-semi-carbazone.

Jian Zhang, Lin-Ping Wu, Ling-Hua Zhuang, Guo-Wei Wang.   

Abstract

The title compound, C(9)H(11)N(3)OS, was prepared by the reaction of 3-methoxy-benzaldehyde and thio-semicarbazide. The benzyl-idene ring and the thio-semicarbazone fragment are slightly twisted, making a dihedral angle of 14.1 (1)°. A weak intra-molecular N-H⋯N hydrogen bond may influence the conformation of the mol-ecule. Inter-molecular N-H⋯S hydrogen bonds build up a three-dimensional network.

Entities:  

Year:  2009        PMID: 21582593      PMCID: PMC2968893          DOI: 10.1107/S160053680901040X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a general background to thio­semicarbazone compounds, see: Casas et al. (2000 ▶); Tarafder et al. (2000 ▶); Ferrari et al. (2000 ▶); Deschamps et al. (2003 ▶); Maccioni et al. (2003 ▶); Chimenti et al.(2007 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C9H11N3OS M = 209.27 Monoclinic, a = 11.814 (2) Å b = 5.6760 (11) Å c = 15.248 (3) Å β = 90.29 (3)° V = 1022.5 (3) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.908, T max = 0.969 1946 measured reflections 1852 independent reflections 1494 reflections with I > 2σ(I) R int = 0.017 3 standard reflections every 200 reflections intensity decay: 9%

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.110 S = 1.06 1852 reflections 128 parameters H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.26 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680901040X/dn2432sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680901040X/dn2432Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H11N3OSF(000) = 440
Mr = 209.27Dx = 1.359 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 27 reflections
a = 11.814 (2) Åθ = 1–25°
b = 5.6760 (11) ŵ = 0.29 mm1
c = 15.248 (3) ÅT = 293 K
β = 90.29 (3)°Block, colorless
V = 1022.5 (3) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1494 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.017
graphiteθmax = 25.3°, θmin = 1.7°
ω/2θ scansh = −14→0
Absorption correction: ψ scan (North et al., 1968)k = 0→6
Tmin = 0.908, Tmax = 0.969l = −18→18
1946 measured reflections3 standard reflections every 200 reflections
1852 independent reflections intensity decay: 9%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0521P)2 + 0.3815P] where P = (Fo2 + 2Fc2)/3
1852 reflections(Δ/σ)max < 0.001
128 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.51511 (6)1.47619 (10)0.35880 (3)0.0442 (2)
O10.85492 (14)0.6407 (3)0.83956 (9)0.0496 (5)
N10.66878 (15)1.0213 (3)0.50804 (11)0.0369 (4)
N20.60984 (16)1.2149 (3)0.47967 (11)0.0407 (5)
H20.59361.32680.51550.049*
N30.59915 (18)1.0451 (4)0.34546 (12)0.0497 (5)
H3A0.63240.92370.36740.060*
H3B0.58001.04630.29100.060*
C10.9085 (2)0.4449 (6)0.88050 (16)0.0614 (8)
H1A0.98620.43770.86270.092*
H1B0.87060.30240.86340.092*
H1C0.90490.46240.94300.092*
C20.84356 (18)0.6327 (4)0.75008 (14)0.0383 (5)
C30.77906 (17)0.8120 (4)0.71427 (13)0.0366 (5)
H30.74790.92640.75050.044*
C40.76070 (17)0.8221 (4)0.62447 (13)0.0350 (5)
C50.8097 (2)0.6510 (4)0.57024 (14)0.0428 (6)
H50.79820.65660.50990.051*
C60.8741 (2)0.4764 (4)0.60621 (16)0.0503 (6)
H60.90710.36420.57000.060*
C70.8914 (2)0.4638 (4)0.69715 (16)0.0472 (6)
H70.93460.34300.72140.057*
C80.69256 (18)1.0136 (4)0.58932 (13)0.0379 (5)
H80.66631.13110.62650.045*
C90.57769 (17)1.2279 (4)0.39499 (13)0.0332 (5)
U11U22U33U12U13U23
S10.0643 (4)0.0374 (3)0.0309 (3)0.0090 (3)−0.0081 (3)0.0035 (2)
O10.0534 (10)0.0621 (12)0.0333 (8)0.0106 (9)−0.0062 (7)0.0109 (8)
N10.0429 (10)0.0363 (10)0.0315 (9)0.0058 (9)−0.0045 (8)0.0024 (8)
N20.0555 (12)0.0378 (11)0.0286 (9)0.0118 (9)−0.0091 (8)−0.0020 (8)
N30.0732 (14)0.0442 (12)0.0315 (9)0.0164 (11)−0.0128 (9)−0.0056 (9)
C10.0631 (16)0.077 (2)0.0444 (14)0.0194 (15)−0.0057 (12)0.0225 (14)
C20.0335 (11)0.0471 (14)0.0343 (11)−0.0031 (10)−0.0041 (9)0.0072 (10)
C30.0338 (11)0.0429 (13)0.0331 (11)0.0020 (10)0.0002 (9)0.0024 (10)
C40.0331 (11)0.0380 (12)0.0340 (11)−0.0035 (10)−0.0043 (9)0.0045 (10)
C50.0526 (14)0.0413 (14)0.0346 (11)0.0013 (11)−0.0061 (10)−0.0020 (10)
C60.0622 (16)0.0432 (14)0.0454 (13)0.0109 (12)−0.0051 (12)−0.0084 (11)
C70.0517 (14)0.0401 (13)0.0497 (14)0.0076 (11)−0.0091 (11)0.0061 (11)
C80.0389 (11)0.0439 (13)0.0309 (11)0.0039 (10)−0.0012 (9)0.0002 (10)
C90.0372 (11)0.0357 (12)0.0266 (10)−0.0032 (10)−0.0024 (8)0.0015 (9)
S1—C91.683 (2)C2—C71.377 (3)
O1—C21.371 (2)C2—C31.382 (3)
O1—C11.422 (3)C3—C41.386 (3)
N1—C81.270 (3)C3—H30.9300
N1—N21.370 (2)C4—C51.402 (3)
N2—C91.346 (3)C4—C81.454 (3)
N2—H20.8600C5—C61.363 (3)
N3—C91.309 (3)C5—H50.9300
N3—H3A0.8600C6—C71.402 (3)
N3—H3B0.8600C6—H60.9300
C1—H1A0.9600C7—H70.9300
C1—H1B0.9600C8—H80.9300
C1—H1C0.9600
C2—O1—C1116.9 (2)C4—C3—H3119.9
C8—N1—N2116.44 (18)C3—C4—C5119.4 (2)
C9—N2—N1119.16 (18)C3—C4—C8118.6 (2)
C9—N2—H2120.4C5—C4—C8122.00 (19)
N1—N2—H2120.4C6—C5—C4119.8 (2)
C9—N3—H3A120.0C6—C5—H5120.1
C9—N3—H3B120.0C4—C5—H5120.1
H3A—N3—H3B120.0C5—C6—C7120.9 (2)
O1—C1—H1A109.5C5—C6—H6119.6
O1—C1—H1B109.5C7—C6—H6119.6
H1A—C1—H1B109.5C2—C7—C6119.1 (2)
O1—C1—H1C109.5C2—C7—H7120.5
H1A—C1—H1C109.5C6—C7—H7120.5
H1B—C1—H1C109.5N1—C8—C4120.3 (2)
O1—C2—C7124.6 (2)N1—C8—H8119.8
O1—C2—C3114.8 (2)C4—C8—H8119.8
C7—C2—C3120.6 (2)N3—C9—N2117.1 (2)
C2—C3—C4120.2 (2)N3—C9—S1124.11 (16)
C2—C3—H3119.9N2—C9—S1118.78 (16)
D—H···AD—HH···AD···AD—H···A
N2—H2···S1i0.862.573.370 (2)156
N3—H3B···S1ii0.862.573.411 (2)166
N3—H3A···N10.862.252.611 (3)105
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯S1i0.862.573.370 (2)156
N3—H3B⋯S1ii0.862.573.411 (2)166
N3—H3A⋯N10.862.252.611 (3)105

Symmetry codes: (i) ; (ii) .

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