| Literature DB >> 21577642 |
Jian Zhang1, Hao Geng, Ling-Hua Zhuang, Guo-Wei Wang.
Abstract
The title compound, C(9)H(11)N(3)S, was prepared by reacting 4-methyl-benzaldehyde with thio-semicarbazide. An intra-molecular N-H⋯N hydrogen bond helps to establish the observed mol-ecular conformation. The crystal packing is realized by inter-molecular N-H⋯S hydrogen bonds.Entities:
Year: 2009 PMID: 21577642 PMCID: PMC2969930 DOI: 10.1107/S1600536809033297
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11N3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 27 reflections |
| θ = 1–25° | |
| µ = 0.27 mm−1 | |
| β = 111.15 (3)° | Block, colorless |
| 0.30 × 0.20 × 0.10 mm | |
| Enraf–Nonius CAD-4 diffractometer | 1322 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.3°, θmin = 1.7° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 1982 measured reflections | 3 standard reflections every 200 reflections |
| 1898 independent reflections | intensity decay: 9% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1898 reflections | Δρmax = 0.26 e Å−3 |
| 120 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.034 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S | 0.48277 (7) | 0.09017 (9) | 0.81196 (7) | 0.0534 (3) | |
| N1 | 0.34064 (18) | −0.0455 (3) | 0.4236 (2) | 0.0438 (6) | |
| C1 | −0.0005 (3) | −0.2600 (6) | −0.1894 (3) | 0.0788 (12) | |
| H1B | −0.0374 | −0.3614 | −0.1934 | 0.118* | |
| H1C | 0.0324 | −0.2593 | −0.2585 | 0.118* | |
| H1D | −0.0514 | −0.1721 | −0.2067 | 0.118* | |
| N2 | 0.40264 (19) | −0.0458 (3) | 0.5647 (2) | 0.0456 (6) | |
| H2A | 0.4275 | −0.1358 | 0.6065 | 0.055* | |
| C2 | 0.0863 (3) | −0.2397 (5) | −0.0467 (3) | 0.0560 (9) | |
| N3 | 0.3955 (2) | 0.2299 (3) | 0.5633 (3) | 0.0630 (8) | |
| H3A | 0.3650 | 0.2263 | 0.4743 | 0.076* | |
| H3B | 0.4078 | 0.3222 | 0.6054 | 0.076* | |
| C3 | 0.1264 (3) | −0.0877 (4) | 0.0043 (3) | 0.0614 (9) | |
| H3C | 0.1006 | 0.0034 | −0.0513 | 0.074* | |
| C4 | 0.2041 (3) | −0.0681 (4) | 0.1365 (3) | 0.0553 (8) | |
| H4A | 0.2302 | 0.0352 | 0.1678 | 0.066* | |
| C5 | 0.2429 (2) | −0.2018 (4) | 0.2222 (3) | 0.0445 (7) | |
| C6 | 0.2060 (2) | −0.3553 (4) | 0.1705 (3) | 0.0521 (8) | |
| H6A | 0.2329 | −0.4465 | 0.2255 | 0.063* | |
| C7 | 0.1289 (3) | −0.3741 (4) | 0.0370 (3) | 0.0565 (9) | |
| H7A | 0.1056 | −0.4779 | 0.0036 | 0.068* | |
| C8 | 0.3157 (2) | −0.1842 (4) | 0.3664 (3) | 0.0452 (7) | |
| H8A | 0.3446 | −0.2770 | 0.4180 | 0.054* | |
| C9 | 0.4235 (2) | 0.0939 (3) | 0.6353 (3) | 0.0420 (7) |
| S | 0.0798 (6) | 0.0472 (5) | 0.0282 (4) | −0.0056 (4) | 0.0134 (4) | −0.0039 (3) |
| N1 | 0.0512 (15) | 0.0501 (15) | 0.0282 (11) | −0.0033 (11) | 0.0121 (10) | −0.0016 (10) |
| C1 | 0.071 (2) | 0.116 (3) | 0.0399 (18) | −0.014 (2) | 0.0086 (17) | −0.015 (2) |
| N2 | 0.0603 (16) | 0.0443 (14) | 0.0268 (11) | −0.0011 (12) | 0.0094 (11) | −0.0010 (10) |
| C2 | 0.0497 (19) | 0.081 (2) | 0.0362 (16) | −0.0065 (17) | 0.0143 (14) | −0.0080 (16) |
| N3 | 0.100 (2) | 0.0425 (15) | 0.0339 (13) | 0.0016 (14) | 0.0082 (14) | −0.0005 (11) |
| C3 | 0.068 (2) | 0.067 (2) | 0.0419 (17) | −0.0007 (18) | 0.0119 (16) | 0.0070 (16) |
| C4 | 0.064 (2) | 0.055 (2) | 0.0386 (16) | −0.0061 (16) | 0.0082 (14) | −0.0039 (14) |
| C5 | 0.0452 (17) | 0.0530 (18) | 0.0342 (14) | −0.0006 (14) | 0.0131 (12) | −0.0056 (13) |
| C6 | 0.0556 (19) | 0.0562 (19) | 0.0423 (17) | −0.0015 (15) | 0.0151 (14) | −0.0060 (15) |
| C7 | 0.057 (2) | 0.066 (2) | 0.0451 (17) | −0.0113 (16) | 0.0169 (15) | −0.0190 (16) |
| C8 | 0.0516 (18) | 0.0476 (18) | 0.0332 (14) | 0.0002 (14) | 0.0115 (13) | −0.0019 (13) |
| C9 | 0.0492 (17) | 0.0438 (16) | 0.0320 (14) | −0.0015 (13) | 0.0135 (12) | −0.0018 (13) |
| S—C9 | 1.704 (3) | N3—H3A | 0.8600 |
| N1—C8 | 1.271 (4) | N3—H3B | 0.8600 |
| N1—N2 | 1.389 (3) | C3—C4 | 1.390 (4) |
| C1—C2 | 1.514 (4) | C3—H3C | 0.9300 |
| C1—H1B | 0.9600 | C4—C5 | 1.387 (4) |
| C1—H1C | 0.9600 | C4—H4A | 0.9300 |
| C1—H1D | 0.9600 | C5—C6 | 1.388 (4) |
| N2—C9 | 1.334 (3) | C5—C8 | 1.458 (4) |
| N2—H2A | 0.8600 | C6—C7 | 1.395 (4) |
| C2—C3 | 1.385 (5) | C6—H6A | 0.9300 |
| C2—C7 | 1.390 (5) | C7—H7A | 0.9300 |
| N3—C9 | 1.319 (3) | C8—H8A | 0.9300 |
| C8—N1—N2 | 116.1 (2) | C5—C4—C3 | 120.4 (3) |
| C2—C1—H1B | 109.5 | C5—C4—H4A | 119.8 |
| C2—C1—H1C | 109.5 | C3—C4—H4A | 119.8 |
| H1B—C1—H1C | 109.5 | C4—C5—C6 | 118.5 (3) |
| C2—C1—H1D | 109.5 | C4—C5—C8 | 121.9 (3) |
| H1B—C1—H1D | 109.5 | C6—C5—C8 | 119.5 (3) |
| H1C—C1—H1D | 109.5 | C5—C6—C7 | 120.7 (3) |
| C9—N2—N1 | 119.9 (2) | C5—C6—H6A | 119.7 |
| C9—N2—H2A | 120.1 | C7—C6—H6A | 119.7 |
| N1—N2—H2A | 120.1 | C2—C7—C6 | 120.8 (3) |
| C3—C2—C7 | 117.9 (3) | C2—C7—H7A | 119.6 |
| C3—C2—C1 | 121.4 (3) | C6—C7—H7A | 119.6 |
| C7—C2—C1 | 120.8 (3) | N1—C8—C5 | 121.8 (3) |
| C9—N3—H3A | 120.0 | N1—C8—H8A | 119.1 |
| C9—N3—H3B | 120.0 | C5—C8—H8A | 119.1 |
| H3A—N3—H3B | 120.0 | N3—C9—N2 | 117.5 (2) |
| C2—C3—C4 | 121.6 (3) | N3—C9—S | 123.0 (2) |
| C2—C3—H3C | 119.2 | N2—C9—S | 119.5 (2) |
| C4—C3—H3C | 119.2 | ||
| C8—N1—N2—C9 | −173.6 (3) | C3—C2—C7—C6 | 2.8 (5) |
| C7—C2—C3—C4 | −2.1 (5) | C1—C2—C7—C6 | −177.7 (3) |
| C1—C2—C3—C4 | 178.4 (3) | C5—C6—C7—C2 | −0.8 (5) |
| C2—C3—C4—C5 | −0.7 (5) | N2—N1—C8—C5 | 174.4 (2) |
| C3—C4—C5—C6 | 2.8 (5) | C4—C5—C8—N1 | 5.3 (5) |
| C3—C4—C5—C8 | −173.4 (3) | C6—C5—C8—N1 | −170.9 (3) |
| C4—C5—C6—C7 | −2.0 (5) | N1—N2—C9—N3 | −8.5 (4) |
| C8—C5—C6—C7 | 174.2 (3) | N1—N2—C9—S | 170.71 (19) |
| H··· | ||||
| N3—H3A···N1 | 0.86 | 2.29 | 2.641 (4) | 105 |
| N2—H2A···Si | 0.86 | 2.54 | 3.389 (3) | 168 |
| N3—H3B···Sii | 0.86 | 2.61 | 3.395 (3) | 153 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.54 | 3.389 (3) | 168 |
| N3—H3 | 0.86 | 2.61 | 3.395 (3) | 153 |
| N3—H3 | 0.86 | 2.29 | 2.641 (4) | 105 |
Symmetry codes: (i) ; (ii) .