Literature DB >> 21582576

1-Ethyl-N'-[(E)-4-hydroxy-benzyl-idene]-7-methyl-4-oxo-1,4-dihydro-1,8-naphthyridine-3-carbohydrazide.

Farah Deeba, Misbahul Ain Khan, Muhammad Zia-Ur-Rehman, Nagihan Caylak, Ertan Sahin.   

Abstract

In the crystal structure of the title compound, C(19)H(18)N(4)O(3), the fused-ring system is essentially planar [maximum deviation is 0.031 (2) Å] while the dihedral angle between the ring system and the benzene ring is 12.64 (6)°.The carbohydrazide H atom is involved in an intra-molecular N-H⋯O hydrogen bond, forming a six-membered hydrogen-bonded ring. The mol-ecules arrange themselves into centrosymmetric dimers by means of inter-molecular O-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21582576      PMCID: PMC2969025          DOI: 10.1107/S1600536809009167

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of heterocyclic compounds, see: Chen et al. (2001 ▶); Zia-ur-Rehman et al. (2006 ▶, 2009 ▶). For their biological activity, see: Ferrarini et al. (2000 ▶); Gavrilova & Bosnich (2004 ▶); Goswami & Mukherjee (1997 ▶); Hoock et al. (1999 ▶); Mintert & Sheldrick (1995 ▶); Nakatani et al. (2000 ▶); Nakataniz et al. (2001 ▶); Roma et al. (2000 ▶). For similar mol­ecules, see: Catalano et al. (2000 ▶).

Experimental

Crystal data

C19H18N4O3 M = 350.37 Monoclinic, a = 7.6437 (2) Å b = 13.3290 (2) Å c = 17.2212 (4) Å β = 98.1745 (14)° V = 1736.72 (7) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.2 × 0.14 × 0.1 mm

Data collection

Rigaku R-AXIS RAPID-S diffractometer Absorption correction: multi-scan (Blessing, 1995 ▶) T min = 0.990, T max = 0.991 35553 measured reflections 3583 independent reflections 2597 reflections with I > 2σ(I) R int = 0.064

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.151 S = 1.04 3583 reflections 244 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.16 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809009167/ng2560sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809009167/ng2560Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H18N4O3F(000) = 736
Mr = 350.37Dx = 1.34 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3643 reflections
a = 7.6437 (2) Åθ = 2.4–26.4°
b = 13.3290 (2) ŵ = 0.09 mm1
c = 17.2212 (4) ÅT = 293 K
β = 98.1745 (14)°Prism, light yellow
V = 1736.72 (7) Å30.2 × 0.14 × 0.1 mm
Z = 4
Rigaku R-AXIS RAPID-S diffractometer3583 independent reflections
graphite2597 reflections with I > 2σ(I)
Detector resolution: 10.0000 pixels mm-1Rint = 0.064
ω scansθmax = 26.7°, θmin = 2.4°
Absorption correction: multi-scan (Blessing, 1995)h = −8→9
Tmin = 0.990, Tmax = 0.991k = −16→16
35553 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.151H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0654P)2 + 0.3979P] where P = (Fo2 + 2Fc2)/3
3583 reflections(Δ/σ)max < 0.001
244 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.2080 (2)0.01852 (11)0.57270 (8)0.0654 (4)
O3−0.1795 (2)−0.65000 (11)0.71180 (9)0.0686 (4)
H3O−0.1729−0.69190.67750.103*
N10.4591 (2)0.22498 (12)0.39012 (10)0.0556 (4)
N30.1243 (2)−0.16773 (13)0.52592 (10)0.0554 (4)
N40.0658 (2)−0.26173 (12)0.54348 (10)0.0554 (4)
O20.1598 (2)−0.20967 (11)0.40138 (9)0.0750 (5)
N20.3819 (2)0.05987 (12)0.36073 (9)0.0532 (4)
C17−0.1341 (3)−0.55811 (15)0.68611 (11)0.0524 (5)
C14−0.0321 (3)−0.36963 (14)0.63803 (11)0.0517 (5)
C110.2538 (3)0.03007 (14)0.50649 (11)0.0505 (5)
C100.2423 (3)−0.04590 (14)0.44689 (11)0.0493 (5)
C16−0.1130 (3)−0.54200 (15)0.60834 (11)0.0567 (5)
H16−0.1315−0.5940.57210.068*
C90.3081 (3)−0.02682 (15)0.37834 (12)0.0544 (5)
H90.3009−0.07790.34130.065*
C130.0289 (3)−0.27273 (16)0.61292 (12)0.0561 (5)
C15−0.0647 (3)−0.44868 (15)0.58534 (11)0.0590 (5)
H15−0.0533−0.4380.53290.071*
C60.3892 (3)0.13908 (14)0.41286 (11)0.0494 (5)
C18−0.1077 (3)−0.48014 (16)0.73924 (11)0.0580 (5)
H18−0.1243−0.49030.79110.07*
C50.3272 (3)0.12561 (14)0.48473 (11)0.0500 (5)
C20.4702 (3)0.30211 (15)0.43905 (13)0.0586 (5)
C120.1715 (3)−0.14835 (14)0.45515 (12)0.0539 (5)
C19−0.0567 (3)−0.38686 (15)0.71523 (11)0.0562 (5)
H19−0.0385−0.33480.75150.067*
C10.5445 (3)0.39767 (17)0.41103 (15)0.0736 (7)
H1A0.57640.38750.35970.11*
H1C0.64740.41680.44660.11*
H1B0.45730.44980.40890.11*
C40.3414 (3)0.20843 (16)0.53477 (13)0.0648 (6)
H40.30230.20410.58340.078*
C30.4127 (4)0.29585 (17)0.51221 (13)0.0716 (6)
H30.42290.35110.54560.086*
C70.4608 (3)0.06988 (18)0.28730 (12)0.0679 (6)
H7A0.49110.00380.26980.082*
H7B0.56910.10860.29790.082*
C80.3387 (4)0.1199 (3)0.22344 (15)0.1028 (10)
H8B0.39560.12540.17740.154*
H8C0.30930.18570.24030.154*
H8A0.23280.08080.21160.154*
H130.045 (3)−0.2191 (17)0.6511 (13)0.067 (6)*
H3N0.131 (3)−0.1174 (17)0.5616 (13)0.070 (7)*
U11U22U33U12U13U23
O10.0978 (11)0.0566 (9)0.0456 (8)−0.0032 (8)0.0238 (8)0.0018 (6)
O30.1010 (12)0.0523 (8)0.0579 (9)−0.0040 (8)0.0296 (9)0.0053 (7)
N10.0569 (10)0.0537 (10)0.0566 (10)−0.0026 (8)0.0098 (8)0.0042 (8)
N30.0732 (11)0.0448 (9)0.0499 (10)−0.0026 (8)0.0139 (8)0.0024 (8)
N40.0676 (11)0.0446 (9)0.0551 (10)−0.0016 (8)0.0125 (8)0.0040 (7)
O20.1160 (14)0.0533 (9)0.0596 (9)−0.0130 (8)0.0259 (9)−0.0086 (7)
N20.0632 (10)0.0529 (9)0.0466 (9)−0.0036 (8)0.0186 (7)−0.0010 (7)
C170.0623 (12)0.0483 (11)0.0491 (11)0.0007 (9)0.0159 (9)0.0051 (8)
C140.0608 (12)0.0479 (10)0.0481 (11)−0.0006 (9)0.0131 (9)0.0019 (8)
C110.0581 (12)0.0503 (11)0.0436 (10)0.0056 (9)0.0093 (8)0.0023 (8)
C100.0561 (11)0.0473 (10)0.0452 (10)0.0009 (8)0.0090 (8)0.0025 (8)
C160.0767 (14)0.0502 (11)0.0454 (11)−0.0023 (10)0.0165 (10)−0.0024 (8)
C90.0658 (13)0.0496 (11)0.0492 (11)−0.0001 (9)0.0132 (9)−0.0043 (9)
C130.0698 (14)0.0492 (11)0.0507 (12)0.0003 (10)0.0130 (10)−0.0005 (9)
C150.0837 (15)0.0531 (12)0.0438 (11)−0.0039 (10)0.0210 (10)0.0011 (9)
C60.0526 (11)0.0486 (10)0.0472 (10)0.0016 (8)0.0082 (8)0.0019 (8)
C180.0748 (14)0.0598 (12)0.0422 (10)0.0000 (10)0.0186 (9)0.0041 (9)
C50.0579 (11)0.0487 (11)0.0439 (10)0.0003 (9)0.0084 (8)0.0012 (8)
C20.0617 (13)0.0507 (12)0.0619 (13)−0.0030 (9)0.0038 (10)0.0032 (10)
C120.0644 (13)0.0476 (11)0.0505 (11)0.0016 (9)0.0109 (9)−0.0002 (9)
C190.0724 (13)0.0526 (11)0.0454 (10)−0.0008 (10)0.0143 (9)−0.0043 (9)
C10.0827 (16)0.0550 (13)0.0837 (17)−0.0096 (11)0.0138 (13)0.0068 (12)
C40.0901 (16)0.0577 (13)0.0476 (11)−0.0027 (11)0.0130 (11)−0.0034 (9)
C30.1043 (19)0.0523 (12)0.0586 (13)−0.0098 (12)0.0126 (12)−0.0079 (10)
C70.0866 (16)0.0671 (14)0.0573 (13)−0.0084 (12)0.0348 (12)−0.0037 (10)
C80.111 (2)0.144 (3)0.0552 (15)−0.011 (2)0.0182 (15)0.0164 (17)
O1—C111.249 (2)C16—H160.93
O3—C171.364 (2)C9—H90.93
O3—H3O0.82C13—H130.97 (2)
N1—C21.324 (3)C15—H150.93
N1—C61.345 (2)C6—C51.398 (3)
N3—C121.344 (3)C18—C191.384 (3)
N3—N41.378 (2)C18—H180.93
N3—H3N0.91 (2)C5—C41.395 (3)
N4—C131.275 (3)C2—C31.394 (3)
O2—C121.229 (2)C2—C11.502 (3)
N2—C91.340 (3)C19—H190.93
N2—C61.382 (2)C1—H1A0.96
N2—C71.482 (2)C1—H1C0.96
C17—C181.380 (3)C1—H1B0.96
C17—C161.388 (3)C4—C31.366 (3)
C14—C191.388 (3)C4—H40.93
C14—C151.390 (3)C3—H30.93
C14—C131.460 (3)C7—C81.495 (4)
C11—C101.436 (3)C7—H7A0.97
C11—C51.462 (3)C7—H7B0.97
C10—C91.371 (3)C8—H8B0.96
C10—C121.483 (3)C8—H8C0.96
C16—C151.372 (3)C8—H8A0.96
C17—O3—H3O109.5C19—C18—H18120
C2—N1—C6117.86 (17)C4—C5—C6116.04 (18)
C12—N3—N4120.71 (17)C4—C5—C11121.99 (18)
C12—N3—H3N118.4 (15)C6—C5—C11121.97 (17)
N4—N3—H3N120.9 (14)N1—C2—C3121.92 (19)
C13—N4—N3115.59 (17)N1—C2—C1116.5 (2)
C9—N2—C6119.42 (16)C3—C2—C1121.5 (2)
C9—N2—C7120.42 (17)O2—C12—N3123.72 (19)
C6—N2—C7120.13 (16)O2—C12—C10121.92 (18)
O3—C17—C18118.75 (17)N3—C12—C10114.36 (17)
O3—C17—C16121.44 (18)C18—C19—C14121.14 (19)
C18—C17—C16119.80 (18)C18—C19—H19119.4
C19—C14—C15117.65 (18)C14—C19—H19119.4
C19—C14—C13121.51 (18)C2—C1—H1A109.5
C15—C14—C13120.84 (18)C2—C1—H1C109.5
O1—C11—C10124.68 (18)H1A—C1—H1C109.5
O1—C11—C5120.61 (18)C2—C1—H1B109.5
C10—C11—C5114.70 (16)H1A—C1—H1B109.5
C9—C10—C11119.47 (18)H1C—C1—H1B109.5
C9—C10—C12115.90 (17)C3—C4—C5119.9 (2)
C11—C10—C12124.54 (17)C3—C4—H4120.1
C15—C16—C17119.46 (18)C5—C4—H4120.1
C15—C16—H16120.3C4—C3—C2119.8 (2)
C17—C16—H16120.3C4—C3—H3120.1
N2—C9—C10124.95 (18)C2—C3—H3120.1
N2—C9—H9117.5N2—C7—C8112.4 (2)
C10—C9—H9117.5N2—C7—H7A109.1
N4—C13—C14120.13 (19)C8—C7—H7A109.1
N4—C13—H13121.9 (13)N2—C7—H7B109.1
C14—C13—H13117.9 (13)C8—C7—H7B109.1
C16—C15—C14121.96 (18)H7A—C7—H7B107.9
C16—C15—H15119C7—C8—H8B109.5
C14—C15—H15119C7—C8—H8C109.5
N1—C6—N2116.22 (17)H8B—C8—H8C109.5
N1—C6—C5124.45 (18)C7—C8—H8A109.5
N2—C6—C5119.32 (17)H8B—C8—H8A109.5
C17—C18—C19119.94 (18)H8C—C8—H8A109.5
C17—C18—H18120
C12—N3—N4—C13178.2 (2)N2—C6—C5—C4179.03 (18)
O1—C11—C10—C9−175.46 (19)N1—C6—C5—C11−179.47 (18)
C5—C11—C10—C93.8 (3)N2—C6—C5—C11−0.3 (3)
O1—C11—C10—C121.1 (3)O1—C11—C5—C4−3.1 (3)
C5—C11—C10—C12−179.61 (18)C10—C11—C5—C4177.57 (19)
O3—C17—C16—C15−179.0 (2)O1—C11—C5—C6176.24 (19)
C18—C17—C16—C150.5 (3)C10—C11—C5—C6−3.1 (3)
C6—N2—C9—C10−2.4 (3)C6—N1—C2—C30.3 (3)
C7—N2—C9—C10175.4 (2)C6—N1—C2—C1−178.45 (19)
C11—C10—C9—N2−1.3 (3)N4—N3—C12—O23.0 (3)
C12—C10—C9—N2−178.10 (19)N4—N3—C12—C10−176.28 (17)
N3—N4—C13—C14−179.25 (18)C9—C10—C12—O2−5.6 (3)
C19—C14—C13—N4173.6 (2)C11—C10—C12—O2177.8 (2)
C15—C14—C13—N4−5.2 (3)C9—C10—C12—N3173.73 (18)
C17—C16—C15—C141.4 (3)C11—C10—C12—N3−2.9 (3)
C19—C14—C15—C16−2.4 (3)C17—C18—C19—C140.4 (3)
C13—C14—C15—C16176.5 (2)C15—C14—C19—C181.5 (3)
C2—N1—C6—N2−179.19 (17)C13—C14—C19—C18−177.4 (2)
C2—N1—C6—C50.0 (3)C6—C5—C4—C3−0.1 (3)
C9—N2—C6—N1−177.63 (18)C11—C5—C4—C3179.3 (2)
C7—N2—C6—N14.5 (3)C5—C4—C3—C20.4 (4)
C9—N2—C6—C53.2 (3)N1—C2—C3—C4−0.5 (4)
C7—N2—C6—C5−174.73 (19)C1—C2—C3—C4178.2 (2)
O3—C17—C18—C19178.2 (2)C9—N2—C7—C898.6 (3)
C16—C17—C18—C19−1.4 (3)C6—N2—C7—C8−83.5 (3)
N1—C6—C5—C4−0.1 (3)
D—H···AD—HH···AD···AD—H···A
N3—H3N···O10.91 (2)1.91 (2)2.660 (3)139 (2)
O3—H3O···O2i0.821.902.721 (3)179
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3N⋯O10.91 (2)1.91 (2)2.660 (3)139 (2)
O3—H3O⋯O2i0.821.902.721 (3)179

Symmetry code: (i) .

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