Literature DB >> 21582522

2-(4-Methoxy-phen-yl)-4,5-dihydro-1H-imidazole.

Reza Kia, Hoong-Kun Fun, Hadi Kargar.   

Abstract

In the title mol-ecule, C(10)H(12)N(2)O, the dihedral angle between the benzene and imidazole rings is 14.86 (16)°. The approximately planar arrangement of the mol-ecule results in a distance of 2.54 Å between an ortho-H atom of the benzene ring and the double-bonded N atom of the imidazole ring. In the crystal structure, symmetry-related mol-ecules are linked by inter-molecular N-H⋯N hydrogen bonds into one-dimensional chains extending along the a axis.

Entities:  

Year:  2009        PMID: 21582522      PMCID: PMC2968807          DOI: 10.1107/S1600536809009106

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related structures and syntheses, see: Stibrany et al. (2004 ▶); Kia et al. (2008 ▶, 2009a ▶,b ▶). For applications, see, for example: Blancafort (1978 ▶); Chan (1993 ▶); Vizi (1986 ▶); Li et al. (1996 ▶); Ueno et al. (1995 ▶); Corey & Grogan (1999 ▶). For details on the stability of the temperature controller used for data collection, see: Cosier & Glazer (1986 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C10H12N2O M = 176.22 Orthorhombic, a = 10.0574 (5) Å b = 13.2532 (7) Å c = 6.8321 (3) Å V = 910.67 (8) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.23 × 0.09 × 0.06 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.981, T max = 0.995 8578 measured reflections 1133 independent reflections 873 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.096 S = 1.08 1133 reflections 123 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809009106/lh2787sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809009106/lh2787Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H12N2OF(000) = 376
Mr = 176.22Dx = 1.285 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 2309 reflections
a = 10.0574 (5) Åθ = 2.5–30.0°
b = 13.2532 (7) ŵ = 0.09 mm1
c = 6.8321 (3) ÅT = 100 K
V = 910.67 (8) Å3Block, colourless
Z = 40.23 × 0.09 × 0.06 mm
Bruker SMART APEXII CCD area-detector diffractometer1133 independent reflections
Radiation source: fine-focus sealed tube873 reflections with I > 2σ(I)
graphiteRint = 0.049
φ and ω scansθmax = 27.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −13→12
Tmin = 0.981, Tmax = 0.995k = −12→17
8578 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0375P)2 + 0.2936P] where P = (Fo2 + 2Fc2)/3
1133 reflections(Δ/σ)max < 0.001
123 parametersΔρmax = 0.22 e Å3
1 restraintΔρmin = −0.22 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.6844 (2)0.00507 (17)−0.4396 (3)0.0302 (6)
N10.6252 (2)0.28654 (19)0.3242 (4)0.0270 (6)
N20.8459 (2)0.25758 (18)0.3284 (4)0.0219 (5)
C10.8179 (3)0.3256 (3)0.4948 (4)0.0234 (7)
H1A0.85550.39350.47020.028*
H1B0.85710.29850.61690.028*
C20.6653 (3)0.3309 (3)0.5111 (4)0.0233 (7)
H2A0.63210.29090.62330.028*
H2B0.63390.40140.52360.028*
C30.7329 (3)0.2397 (2)0.2447 (4)0.0176 (6)
C40.7204 (3)0.1776 (2)0.0662 (4)0.0178 (6)
C50.5988 (3)0.1384 (2)0.0039 (4)0.0184 (6)
H5A0.52080.15120.07840.022*
C60.5902 (3)0.0813 (2)−0.1641 (4)0.0227 (7)
H6A0.50670.0551−0.20440.027*
C70.7032 (3)0.0620 (2)−0.2748 (4)0.0218 (7)
C80.8257 (3)0.0985 (2)−0.2139 (4)0.0236 (7)
H8A0.90360.0844−0.28760.028*
C90.8332 (3)0.1557 (3)−0.0444 (4)0.0232 (7)
H9A0.91720.1805−0.00260.028*
C100.7990 (3)−0.0211 (3)−0.5514 (4)0.0319 (8)
H10A0.7722−0.0624−0.66370.048*
H10B0.8609−0.0594−0.46940.048*
H10C0.84250.0405−0.59810.048*
H1N10.537 (3)0.266 (2)0.310 (6)0.043 (10)*
U11U22U33U12U13U23
O10.0298 (12)0.0350 (14)0.0258 (10)−0.0013 (10)0.0007 (10)−0.0112 (10)
N10.0167 (13)0.0387 (17)0.0257 (12)0.0020 (12)−0.0016 (12)−0.0098 (14)
N20.0188 (12)0.0275 (14)0.0194 (10)−0.0002 (11)−0.0020 (11)−0.0019 (12)
C10.0236 (15)0.0274 (18)0.0192 (13)−0.0035 (14)−0.0023 (14)0.0011 (12)
C20.0231 (14)0.0282 (18)0.0187 (13)−0.0005 (14)−0.0016 (13)−0.0036 (12)
C30.0192 (15)0.0186 (16)0.0150 (11)−0.0016 (13)−0.0017 (12)0.0053 (12)
C40.0183 (15)0.0192 (16)0.0157 (12)−0.0006 (13)−0.0003 (12)0.0044 (13)
C50.0160 (14)0.0203 (17)0.0189 (12)0.0011 (12)−0.0008 (11)0.0024 (12)
C60.0182 (15)0.0253 (17)0.0247 (13)−0.0028 (13)−0.0042 (13)0.0030 (14)
C70.0254 (17)0.0239 (18)0.0159 (13)−0.0003 (14)−0.0004 (12)−0.0016 (13)
C80.0220 (16)0.0284 (18)0.0204 (13)0.0007 (13)0.0060 (13)−0.0007 (14)
C90.0177 (16)0.0304 (19)0.0215 (14)−0.0056 (14)−0.0023 (12)0.0023 (13)
C100.039 (2)0.034 (2)0.0227 (16)0.0027 (16)0.0053 (14)−0.0100 (15)
O1—C71.368 (3)C4—C91.393 (4)
O1—C101.425 (4)C4—C51.396 (4)
N1—C31.361 (4)C5—C61.377 (4)
N1—C21.463 (4)C5—H5A0.9500
N1—H1N10.94 (3)C6—C71.389 (4)
N2—C31.294 (3)C6—H6A0.9500
N2—C11.478 (4)C7—C81.387 (4)
C1—C21.541 (4)C8—C91.386 (4)
C1—H1A0.9900C8—H8A0.9500
C1—H1B0.9900C9—H9A0.9500
C2—H2A0.9900C10—H10A0.9800
C2—H2B0.9900C10—H10B0.9800
C3—C41.476 (4)C10—H10C0.9800
C7—O1—C10117.6 (2)C5—C4—C3122.2 (3)
C3—N1—C2108.2 (2)C6—C5—C4120.9 (3)
C3—N1—H1N1126 (2)C6—C5—H5A119.6
C2—N1—H1N1118 (3)C4—C5—H5A119.6
C3—N2—C1106.6 (2)C5—C6—C7120.3 (3)
N2—C1—C2105.8 (2)C5—C6—H6A119.9
N2—C1—H1A110.6C7—C6—H6A119.9
C2—C1—H1A110.6O1—C7—C8124.2 (3)
N2—C1—H1B110.6O1—C7—C6115.9 (3)
C2—C1—H1B110.6C8—C7—C6119.9 (2)
H1A—C1—H1B108.7C9—C8—C7119.3 (3)
N1—C2—C1101.1 (2)C9—C8—H8A120.3
N1—C2—H2A111.5C7—C8—H8A120.3
C1—C2—H2A111.5C8—C9—C4121.5 (3)
N1—C2—H2B111.5C8—C9—H9A119.2
C1—C2—H2B111.5C4—C9—H9A119.2
H2A—C2—H2B109.4O1—C10—H10A109.5
N2—C3—N1116.0 (2)O1—C10—H10B109.5
N2—C3—C4122.8 (3)H10A—C10—H10B109.5
N1—C3—C4121.1 (2)O1—C10—H10C109.5
C9—C4—C5118.1 (3)H10A—C10—H10C109.5
C9—C4—C3119.7 (3)H10B—C10—H10C109.5
C3—N2—C1—C28.4 (3)C3—C4—C5—C6179.5 (3)
C3—N1—C2—C114.4 (3)C4—C5—C6—C7−0.1 (4)
N2—C1—C2—N1−13.7 (3)C10—O1—C7—C82.3 (4)
C1—N2—C3—N11.0 (3)C10—O1—C7—C6−176.7 (3)
C1—N2—C3—C4177.3 (3)C5—C6—C7—O1−179.7 (2)
C2—N1—C3—N2−10.7 (3)C5—C6—C7—C81.3 (4)
C2—N1—C3—C4172.9 (3)O1—C7—C8—C9179.9 (3)
N2—C3—C4—C9−15.1 (4)C6—C7—C8—C9−1.2 (4)
N1—C3—C4—C9161.0 (3)C7—C8—C9—C4−0.2 (4)
N2—C3—C4—C5164.1 (3)C5—C4—C9—C81.4 (4)
N1—C3—C4—C5−19.8 (4)C3—C4—C9—C8−179.4 (3)
C9—C4—C5—C6−1.3 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1N1···N2i0.93 (3)1.95 (3)2.869 (3)168 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N1⋯N2i0.93 (3)1.95 (3)2.869 (3)168 (3)

Symmetry code: (i) .

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