| Literature DB >> 21581940 |
Reza Kia, Hoong-Kun Fun, Hadi Kargar.
Abstract
In the title compound, C(9)H(9)ClN(2), a substituted imidazoline, the six- and five-membered rings are twisted from each other, making a dihedral angle of 17.07 (5)°. In the crystal structure, a short Cl⋯Cl [3.3540 (3) Å] inter-action is observed. Neighbouring mol-ecules are linked together by inter-molecular N-H⋯N hydrogen bonds into a one-dimensional infinite chain along the [101] direction and short Cl⋯Cl contacts link the chains into a three-dimensional network. There is also a significant π-stacking inter-action between the planar sections of the six- and five-membered rings.Entities:
Year: 2009 PMID: 21581940 PMCID: PMC2968295 DOI: 10.1107/S1600536809001214
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H9ClN2 | |
| Orthorhombic, | Mo |
| Hall symbol: F 2 -2d | Cell parameters from 8962 reflections |
| θ = 2.9–36.7° | |
| µ = 0.39 mm−1 | |
| Block, colourless | |
| 0.51 × 0.50 × 0.09 mm |
| Bruker APEXII CCD area-detector diffractometer | 3438 independent reflections |
| Radiation source: fine-focus sealed tube | 3224 reflections with |
| graphite | |
| φ and ω scans | θmax = 35.0°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 14166 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 3438 reflections | Δρmax = 0.33 e Å−3 |
| 113 parameters | Δρmin = −0.15 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1429 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.05 (4) |
| Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.165233 (12) | 0.246951 (6) | 0.02330 (7) | 0.02846 (7) | |
| N1 | 0.00209 (4) | 0.10678 (2) | 0.1715 (2) | 0.01782 (15) | |
| N2 | 0.11053 (4) | 0.11676 (2) | 0.3205 (2) | 0.01792 (15) | |
| C1 | 0.10570 (4) | 0.18532 (2) | 0.0803 (2) | 0.01732 (16) | |
| H1A | 0.1405 | 0.1803 | 0.2172 | 0.021* | |
| C2 | 0.10314 (4) | 0.21685 (2) | −0.0634 (2) | 0.01837 (17) | |
| C3 | 0.05234 (5) | 0.22529 (2) | −0.2708 (2) | 0.01901 (17) | |
| H3A | 0.0517 | 0.2465 | −0.3667 | 0.023* | |
| C4 | 0.00232 (5) | 0.20104 (3) | −0.3313 (3) | 0.01959 (17) | |
| H4A | −0.0323 | 0.2062 | −0.4686 | 0.024* | |
| C5 | 0.00358 (5) | 0.16926 (2) | −0.1890 (2) | 0.01739 (16) | |
| H5A | −0.0301 | 0.1533 | −0.2313 | 0.021* | |
| C6 | 0.05544 (4) | 0.16118 (2) | 0.0174 (2) | 0.01498 (14) | |
| C7 | 0.05755 (4) | 0.12791 (2) | 0.1766 (2) | 0.01505 (15) | |
| C8 | 0.01553 (5) | 0.07848 (3) | 0.3841 (3) | 0.02052 (18) | |
| H8A | 0.0053 | 0.0566 | 0.2907 | 0.025* | |
| H8B | −0.0102 | 0.0809 | 0.5728 | 0.025* | |
| C9 | 0.09225 (5) | 0.08268 (3) | 0.4421 (3) | 0.02013 (18) | |
| H9A | 0.1021 | 0.0813 | 0.6602 | 0.024* | |
| H9B | 0.1175 | 0.0650 | 0.3364 | 0.024* | |
| H1N1 | −0.0392 (8) | 0.1159 (4) | 0.148 (4) | 0.036 (4)* |
| Cl1 | 0.01974 (10) | 0.01899 (11) | 0.04665 (16) | −0.00554 (8) | −0.00483 (11) | 0.00392 (11) |
| N1 | 0.0124 (3) | 0.0167 (4) | 0.0244 (4) | −0.0016 (3) | −0.0022 (3) | 0.0014 (3) |
| N2 | 0.0132 (3) | 0.0161 (3) | 0.0245 (4) | 0.0007 (3) | −0.0013 (3) | 0.0019 (3) |
| C1 | 0.0122 (3) | 0.0165 (4) | 0.0232 (4) | 0.0008 (3) | −0.0002 (3) | −0.0003 (3) |
| C2 | 0.0139 (3) | 0.0166 (4) | 0.0246 (4) | −0.0010 (3) | 0.0019 (3) | −0.0004 (3) |
| C3 | 0.0189 (4) | 0.0171 (4) | 0.0210 (4) | 0.0013 (3) | 0.0025 (3) | 0.0013 (3) |
| C4 | 0.0180 (4) | 0.0211 (4) | 0.0196 (4) | 0.0016 (3) | −0.0018 (3) | 0.0000 (3) |
| C5 | 0.0148 (3) | 0.0192 (4) | 0.0181 (4) | 0.0000 (3) | −0.0006 (3) | −0.0007 (3) |
| C6 | 0.0120 (3) | 0.0149 (4) | 0.0180 (4) | 0.0012 (3) | 0.0018 (3) | −0.0014 (3) |
| C7 | 0.0117 (3) | 0.0158 (4) | 0.0177 (4) | −0.0003 (3) | 0.0011 (3) | −0.0016 (3) |
| C8 | 0.0164 (4) | 0.0188 (4) | 0.0264 (4) | −0.0021 (3) | −0.0011 (3) | 0.0042 (3) |
| C9 | 0.0159 (4) | 0.0184 (4) | 0.0260 (5) | 0.0002 (3) | −0.0008 (3) | 0.0039 (3) |
| Cl1—C2 | 1.7413 (10) | C3—H3A | 0.9300 |
| N1—C7 | 1.3719 (12) | C4—C5 | 1.3897 (14) |
| N1—C8 | 1.4675 (13) | C4—H4A | 0.9300 |
| N1—H1N1 | 0.896 (16) | C5—C6 | 1.3976 (13) |
| N2—C7 | 1.2942 (12) | C5—H5A | 0.9300 |
| N2—C9 | 1.4799 (13) | C6—C7 | 1.4759 (13) |
| C1—C2 | 1.3844 (14) | C8—C9 | 1.5436 (13) |
| C1—C6 | 1.3969 (12) | C8—H8A | 0.9700 |
| C1—H1A | 0.9300 | C8—H8B | 0.9700 |
| C2—C3 | 1.3884 (14) | C9—H9A | 0.9700 |
| C3—C4 | 1.3944 (14) | C9—H9B | 0.9700 |
| Cl1···Cl1i | 3.3540 (3) | C4···C6iii | 3.3997 (15) |
| C1···C3ii | 3.3945 (12) | C5···C7iii | 3.3716 (12) |
| C1···C4ii | 3.3301 (15) | ||
| C7—N1—C8 | 107.50 (7) | C1—C6—C5 | 119.51 (8) |
| C7—N1—H1N1 | 119.1 (10) | C1—C6—C7 | 119.03 (8) |
| C8—N1—H1N1 | 122.5 (11) | C5—C6—C7 | 121.45 (8) |
| C7—N2—C9 | 106.25 (7) | N2—C7—N1 | 116.68 (8) |
| C2—C1—C6 | 119.26 (9) | N2—C7—C6 | 123.17 (8) |
| C2—C1—H1A | 120.4 | N1—C7—C6 | 120.13 (8) |
| C6—C1—H1A | 120.4 | N1—C8—C9 | 101.53 (7) |
| C1—C2—C3 | 122.13 (9) | N1—C8—H8A | 111.5 |
| C1—C2—Cl1 | 118.68 (7) | C9—C8—H8A | 111.5 |
| C3—C2—Cl1 | 119.19 (8) | N1—C8—H8B | 111.5 |
| C2—C3—C4 | 118.15 (9) | C9—C8—H8B | 111.5 |
| C2—C3—H3A | 120.9 | H8A—C8—H8B | 109.3 |
| C4—C3—H3A | 120.9 | N2—C9—C8 | 106.06 (8) |
| C5—C4—C3 | 120.84 (9) | N2—C9—H9A | 110.5 |
| C5—C4—H4A | 119.6 | C8—C9—H9A | 110.5 |
| C3—C4—H4A | 119.6 | N2—C9—H9B | 110.5 |
| C4—C5—C6 | 120.12 (8) | C8—C9—H9B | 110.5 |
| C4—C5—H5A | 119.9 | H9A—C9—H9B | 108.7 |
| C6—C5—H5A | 119.9 | ||
| C6—C1—C2—C3 | −0.48 (14) | C9—N2—C7—C6 | −179.11 (8) |
| C6—C1—C2—Cl1 | 178.76 (7) | C8—N1—C7—N2 | 9.55 (12) |
| C1—C2—C3—C4 | 0.66 (14) | C8—N1—C7—C6 | −171.73 (8) |
| Cl1—C2—C3—C4 | −178.58 (8) | C1—C6—C7—N2 | −15.38 (13) |
| C2—C3—C4—C5 | −0.37 (15) | C5—C6—C7—N2 | 166.02 (9) |
| C3—C4—C5—C6 | −0.09 (15) | C1—C6—C7—N1 | 165.98 (9) |
| C2—C1—C6—C5 | 0.00 (13) | C5—C6—C7—N1 | −12.62 (13) |
| C2—C1—C6—C7 | −178.62 (8) | C7—N1—C8—C9 | −13.33 (10) |
| C4—C5—C6—C1 | 0.28 (14) | C7—N2—C9—C8 | −8.35 (11) |
| C4—C5—C6—C7 | 178.87 (9) | N1—C8—C9—N2 | 13.08 (10) |
| C9—N2—C7—N1 | −0.43 (11) |
| H··· | ||||
| N1—H1N1···N2iv | 0.896 (16) | 2.118 (16) | 3.0113 (11) | 174.5 (15) |
Selected interatomic distances (Å)
| Cl1⋯Cl1i | 3.3540 (3) |
| C1⋯C3ii | 3.3945 (12) |
| C1⋯C4ii | 3.3301 (15) |
| C4⋯C6iii | 3.3997 (15) |
| C5⋯C7iii | 3.3716 (12) |
Symmetry codes: (i) ; (ii) ; (iii) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.896 (16) | 2.118 (16) | 3.0113 (11) | 174.5 (15) |
Symmetry code: (iv) .