Literature DB >> 21582459

2-p-Tolyl-4,5-dihydro-1H-imidazole.

Reza Kia, Hoong-Kun Fun, Hadi Kargar.   

Abstract

In the mol-ecule of the title compound, C(10)H(12)N(2), the six- and five-membered rings are almost co-planar, forming a dihedral angle of 3.56 (8)°. In the crystal structure, neighbouring mol-ecules are linked together by inter-molecular N-H⋯N hydrogen bonds into one-dimensional infinite chains along the c axis. The crystal structure, is further stabilized by weak inter-molecular C-H⋯π and π-π stacking [centroid-centroid distance = 3.8892 (9) Å] inter-actions.

Entities:  

Year:  2009        PMID: 21582459      PMCID: PMC2968814          DOI: 10.1107/S1600536809008125

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related structures and syntheses, see, Stibrany et al. (2004 ▶); Kia et al., 2008 ▶, 2009 ▶). For applications of imidazoline derivatives, see, for example: Blancafort (1978 ▶); Chan (1993 ▶); Vizi (1986 ▶); Li et al. (1996 ▶); Ueno et al., (1995 ▶); Corey & Grogan (1999 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C10H12N2 M = 160.22 Monoclinic, a = 5.1134 (1) Å b = 16.4020 (4) Å c = 10.1712 (2) Å β = 94.293 (1)° V = 850.66 (3) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 100 K 0.47 × 0.12 × 0.09 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.883, T max = 0.993 8503 measured reflections 1423 independent reflections 1338 reflections with I > 2˘I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.102 S = 1.08 1423 reflections 114 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809008125/at2738sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809008125/at2738Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H12N2F(000) = 344
Mr = 160.22Dx = 1.251 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 3821 reflections
a = 5.1134 (1) Åθ = 2.5–31.5°
b = 16.4020 (4) ŵ = 0.08 mm1
c = 10.1712 (2) ÅT = 100 K
β = 94.293 (1)°Needle, colourless
V = 850.66 (3) Å30.47 × 0.12 × 0.09 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer1423 independent reflections
Radiation source: fine-focus sealed tube1338 reflections with I > 2˘I)
graphiteRint = 0.031
φ and ω scansθmax = 31.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −7→7
Tmin = 0.883, Tmax = 0.993k = −24→24
8503 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.102H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0699P)2 + 0.0868P] where P = (Fo2 + 2Fc2)/3
1423 reflections(Δ/σ)max < 0.001
114 parametersΔρmax = 0.33 e Å3
2 restraintsΔρmin = −0.21 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N2−0.2547 (3)−0.01211 (8)1.08200 (13)0.0175 (3)
N1−0.2444 (3)−0.02899 (8)0.86191 (12)0.0189 (3)
C1−0.4382 (3)−0.07930 (9)1.04580 (15)0.0190 (3)
H1A−0.6091−0.06841.07740.023*
H1B−0.3728−0.13031.08370.023*
C2−0.4570 (3)−0.08371 (9)0.89368 (15)0.0181 (3)
H2A−0.4279−0.13880.86310.022*
H2B−0.6256−0.06440.85610.022*
C3−0.1632 (3)0.01280 (8)0.97337 (13)0.0142 (3)
C40.0262 (3)0.08065 (8)0.96924 (15)0.0141 (2)
C50.1072 (3)0.12199 (9)1.08498 (14)0.0189 (3)
H5A0.04040.10691.16400.023*
C60.2870 (3)0.18556 (9)1.08343 (15)0.0201 (3)
H6A0.33930.21251.16150.024*
C70.3900 (3)0.20952 (8)0.96598 (14)0.0171 (3)
C80.3049 (3)0.16917 (9)0.85050 (15)0.0216 (3)
H8A0.36900.18510.77120.026*
C90.1253 (3)0.10529 (9)0.85124 (15)0.0202 (3)
H9A0.07120.07900.77290.024*
C100.5915 (3)0.27668 (9)0.96448 (17)0.0229 (3)
H10A0.54670.31270.89180.034*
H10B0.76130.25340.95500.034*
H10C0.59460.30671.04560.034*
H1N1−0.233 (5)−0.0121 (14)0.781 (3)0.031 (6)*
U11U22U33U12U13U23
N20.0216 (6)0.0188 (5)0.0123 (5)−0.0046 (5)0.0029 (5)0.0002 (4)
N10.0257 (7)0.0208 (6)0.0103 (5)−0.0085 (5)0.0011 (5)−0.0010 (4)
C10.0227 (7)0.0211 (6)0.0134 (6)−0.0059 (5)0.0035 (5)0.0005 (5)
C20.0201 (7)0.0197 (6)0.0145 (6)−0.0052 (5)0.0007 (5)−0.0002 (5)
C30.0157 (6)0.0148 (6)0.0123 (6)0.0002 (5)0.0014 (5)−0.0002 (4)
C40.0156 (6)0.0147 (5)0.0118 (5)−0.0008 (4)0.0004 (4)0.0003 (4)
C50.0251 (8)0.0204 (6)0.0111 (6)−0.0053 (6)0.0009 (5)0.0015 (5)
C60.0252 (8)0.0224 (6)0.0122 (6)−0.0067 (6)−0.0025 (6)−0.0001 (5)
C70.0169 (7)0.0173 (6)0.0171 (6)−0.0031 (5)0.0011 (5)0.0012 (5)
C80.0260 (8)0.0233 (7)0.0164 (6)−0.0081 (6)0.0076 (6)−0.0009 (5)
C90.0257 (8)0.0219 (6)0.0134 (6)−0.0074 (6)0.0048 (5)−0.0024 (5)
C100.0211 (8)0.0226 (6)0.0249 (7)−0.0078 (6)0.0008 (6)0.0013 (6)
N2—C31.2976 (17)C5—C61.391 (2)
N2—C11.4763 (19)C5—H5A0.9300
N1—C31.3627 (17)C6—C71.3975 (19)
N1—C21.4641 (19)C6—H6A0.9300
N1—H1N10.87 (3)C7—C81.389 (2)
C1—C21.5447 (19)C7—C101.5092 (19)
C1—H1A0.9700C8—C91.394 (2)
C1—H1B0.9700C8—H8A0.9300
C2—H2A0.9700C9—H9A0.9300
C2—H2B0.9700C10—H10A0.9600
C3—C41.4779 (18)C10—H10B0.9600
C4—C51.394 (2)C10—H10C0.9600
C4—C91.397 (2)
C3—N2—C1106.60 (12)C6—C5—C4120.66 (13)
C3—N1—C2108.04 (12)C6—C5—H5A119.7
C3—N1—H1N1125.8 (17)C4—C5—H5A119.7
C2—N1—H1N1120.4 (18)C5—C6—C7120.80 (13)
N2—C1—C2105.98 (12)C5—C6—H6A119.6
N2—C1—H1A110.5C7—C6—H6A119.6
C2—C1—H1A110.5C8—C7—C6118.33 (13)
N2—C1—H1B110.5C8—C7—C10120.66 (13)
C2—C1—H1B110.5C6—C7—C10121.01 (13)
H1A—C1—H1B108.7C7—C8—C9121.21 (13)
N1—C2—C1101.59 (11)C7—C8—H8A119.4
N1—C2—H2A111.5C9—C8—H8A119.4
C1—C2—H2A111.5C8—C9—C4120.25 (14)
N1—C2—H2B111.5C8—C9—H9A119.9
C1—C2—H2B111.5C4—C9—H9A119.9
H2A—C2—H2B109.3C7—C10—H10A109.5
N2—C3—N1116.31 (12)C7—C10—H10B109.5
N2—C3—C4122.68 (12)H10A—C10—H10B109.5
N1—C3—C4120.98 (12)C7—C10—H10C109.5
C5—C4—C9118.72 (12)H10A—C10—H10C109.5
C5—C4—C3119.75 (13)H10B—C10—H10C109.5
C9—C4—C3121.53 (13)
C3—N2—C1—C2−5.19 (16)C9—C4—C5—C6−1.2 (2)
C3—N1—C2—C1−11.95 (15)C3—C4—C5—C6179.46 (14)
N2—C1—C2—N110.31 (15)C4—C5—C6—C70.1 (2)
C1—N2—C3—N1−2.84 (18)C5—C6—C7—C81.1 (2)
C1—N2—C3—C4179.35 (13)C5—C6—C7—C10−178.05 (14)
C2—N1—C3—N210.16 (18)C6—C7—C8—C9−1.2 (2)
C2—N1—C3—C4−171.99 (13)C10—C7—C8—C9177.91 (14)
N2—C3—C4—C5−1.8 (2)C7—C8—C9—C40.2 (2)
N1—C3—C4—C5−179.56 (14)C5—C4—C9—C81.0 (2)
N2—C3—C4—C9178.80 (15)C3—C4—C9—C8−179.62 (14)
N1—C3—C4—C91.1 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1N1···N2i0.87 (3)2.06 (3)2.9224 (18)170 (2)
C10—H10B···Cg1ii0.962.883.8110 (16)163
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N1⋯N2i0.87 (3)2.06 (3)2.9224 (18)170 (2)
C10—H10BCg1ii0.962.883.8110 (16)163

Symmetry codes: (i) ; (ii) . Cg1 is the cetroid of the N1/C2/C1/N2/C3 ring.

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