| Literature DB >> 21582459 |
Reza Kia, Hoong-Kun Fun, Hadi Kargar.
Abstract
In the mol-ecule of the title compound, C(10)H(12)N(2), the six- and five-membered rings are almost co-planar, forming a dihedral angle of 3.56 (8)°. In the crystal structure, neighbouring mol-ecules are linked together by inter-molecular N-H⋯N hydrogen bonds into one-dimensional infinite chains along the c axis. The crystal structure, is further stabilized by weak inter-molecular C-H⋯π and π-π stacking [centroid-centroid distance = 3.8892 (9) Å] inter-actions.Entities:
Year: 2009 PMID: 21582459 PMCID: PMC2968814 DOI: 10.1107/S1600536809008125
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H12N2 | |
| Monoclinic, | Mo |
| Hall symbol: C -2yc | Cell parameters from 3821 reflections |
| θ = 2.5–31.5° | |
| µ = 0.08 mm−1 | |
| β = 94.293 (1)° | Needle, colourless |
| 0.47 × 0.12 × 0.09 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 1423 independent reflections |
| Radiation source: fine-focus sealed tube | 1338 reflections with |
| graphite | |
| φ and ω scans | θmax = 31.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 8503 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1423 reflections | (Δ/σ)max < 0.001 |
| 114 parameters | Δρmax = 0.33 e Å−3 |
| 2 restraints | Δρmin = −0.21 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N2 | −0.2547 (3) | −0.01211 (8) | 1.08200 (13) | 0.0175 (3) | |
| N1 | −0.2444 (3) | −0.02899 (8) | 0.86191 (12) | 0.0189 (3) | |
| C1 | −0.4382 (3) | −0.07930 (9) | 1.04580 (15) | 0.0190 (3) | |
| H1A | −0.6091 | −0.0684 | 1.0774 | 0.023* | |
| H1B | −0.3728 | −0.1303 | 1.0837 | 0.023* | |
| C2 | −0.4570 (3) | −0.08371 (9) | 0.89368 (15) | 0.0181 (3) | |
| H2A | −0.4279 | −0.1388 | 0.8631 | 0.022* | |
| H2B | −0.6256 | −0.0644 | 0.8561 | 0.022* | |
| C3 | −0.1632 (3) | 0.01280 (8) | 0.97337 (13) | 0.0142 (3) | |
| C4 | 0.0262 (3) | 0.08065 (8) | 0.96924 (15) | 0.0141 (2) | |
| C5 | 0.1072 (3) | 0.12199 (9) | 1.08498 (14) | 0.0189 (3) | |
| H5A | 0.0404 | 0.1069 | 1.1640 | 0.023* | |
| C6 | 0.2870 (3) | 0.18556 (9) | 1.08343 (15) | 0.0201 (3) | |
| H6A | 0.3393 | 0.2125 | 1.1615 | 0.024* | |
| C7 | 0.3900 (3) | 0.20952 (8) | 0.96598 (14) | 0.0171 (3) | |
| C8 | 0.3049 (3) | 0.16917 (9) | 0.85050 (15) | 0.0216 (3) | |
| H8A | 0.3690 | 0.1851 | 0.7712 | 0.026* | |
| C9 | 0.1253 (3) | 0.10529 (9) | 0.85124 (15) | 0.0202 (3) | |
| H9A | 0.0712 | 0.0790 | 0.7729 | 0.024* | |
| C10 | 0.5915 (3) | 0.27668 (9) | 0.96448 (17) | 0.0229 (3) | |
| H10A | 0.5467 | 0.3127 | 0.8918 | 0.034* | |
| H10B | 0.7613 | 0.2534 | 0.9550 | 0.034* | |
| H10C | 0.5946 | 0.3067 | 1.0456 | 0.034* | |
| H1N1 | −0.233 (5) | −0.0121 (14) | 0.781 (3) | 0.031 (6)* |
| N2 | 0.0216 (6) | 0.0188 (5) | 0.0123 (5) | −0.0046 (5) | 0.0029 (5) | 0.0002 (4) |
| N1 | 0.0257 (7) | 0.0208 (6) | 0.0103 (5) | −0.0085 (5) | 0.0011 (5) | −0.0010 (4) |
| C1 | 0.0227 (7) | 0.0211 (6) | 0.0134 (6) | −0.0059 (5) | 0.0035 (5) | 0.0005 (5) |
| C2 | 0.0201 (7) | 0.0197 (6) | 0.0145 (6) | −0.0052 (5) | 0.0007 (5) | −0.0002 (5) |
| C3 | 0.0157 (6) | 0.0148 (6) | 0.0123 (6) | 0.0002 (5) | 0.0014 (5) | −0.0002 (4) |
| C4 | 0.0156 (6) | 0.0147 (5) | 0.0118 (5) | −0.0008 (4) | 0.0004 (4) | 0.0003 (4) |
| C5 | 0.0251 (8) | 0.0204 (6) | 0.0111 (6) | −0.0053 (6) | 0.0009 (5) | 0.0015 (5) |
| C6 | 0.0252 (8) | 0.0224 (6) | 0.0122 (6) | −0.0067 (6) | −0.0025 (6) | −0.0001 (5) |
| C7 | 0.0169 (7) | 0.0173 (6) | 0.0171 (6) | −0.0031 (5) | 0.0011 (5) | 0.0012 (5) |
| C8 | 0.0260 (8) | 0.0233 (7) | 0.0164 (6) | −0.0081 (6) | 0.0076 (6) | −0.0009 (5) |
| C9 | 0.0257 (8) | 0.0219 (6) | 0.0134 (6) | −0.0074 (6) | 0.0048 (5) | −0.0024 (5) |
| C10 | 0.0211 (8) | 0.0226 (6) | 0.0249 (7) | −0.0078 (6) | 0.0008 (6) | 0.0013 (6) |
| N2—C3 | 1.2976 (17) | C5—C6 | 1.391 (2) |
| N2—C1 | 1.4763 (19) | C5—H5A | 0.9300 |
| N1—C3 | 1.3627 (17) | C6—C7 | 1.3975 (19) |
| N1—C2 | 1.4641 (19) | C6—H6A | 0.9300 |
| N1—H1N1 | 0.87 (3) | C7—C8 | 1.389 (2) |
| C1—C2 | 1.5447 (19) | C7—C10 | 1.5092 (19) |
| C1—H1A | 0.9700 | C8—C9 | 1.394 (2) |
| C1—H1B | 0.9700 | C8—H8A | 0.9300 |
| C2—H2A | 0.9700 | C9—H9A | 0.9300 |
| C2—H2B | 0.9700 | C10—H10A | 0.9600 |
| C3—C4 | 1.4779 (18) | C10—H10B | 0.9600 |
| C4—C5 | 1.394 (2) | C10—H10C | 0.9600 |
| C4—C9 | 1.397 (2) | ||
| C3—N2—C1 | 106.60 (12) | C6—C5—C4 | 120.66 (13) |
| C3—N1—C2 | 108.04 (12) | C6—C5—H5A | 119.7 |
| C3—N1—H1N1 | 125.8 (17) | C4—C5—H5A | 119.7 |
| C2—N1—H1N1 | 120.4 (18) | C5—C6—C7 | 120.80 (13) |
| N2—C1—C2 | 105.98 (12) | C5—C6—H6A | 119.6 |
| N2—C1—H1A | 110.5 | C7—C6—H6A | 119.6 |
| C2—C1—H1A | 110.5 | C8—C7—C6 | 118.33 (13) |
| N2—C1—H1B | 110.5 | C8—C7—C10 | 120.66 (13) |
| C2—C1—H1B | 110.5 | C6—C7—C10 | 121.01 (13) |
| H1A—C1—H1B | 108.7 | C7—C8—C9 | 121.21 (13) |
| N1—C2—C1 | 101.59 (11) | C7—C8—H8A | 119.4 |
| N1—C2—H2A | 111.5 | C9—C8—H8A | 119.4 |
| C1—C2—H2A | 111.5 | C8—C9—C4 | 120.25 (14) |
| N1—C2—H2B | 111.5 | C8—C9—H9A | 119.9 |
| C1—C2—H2B | 111.5 | C4—C9—H9A | 119.9 |
| H2A—C2—H2B | 109.3 | C7—C10—H10A | 109.5 |
| N2—C3—N1 | 116.31 (12) | C7—C10—H10B | 109.5 |
| N2—C3—C4 | 122.68 (12) | H10A—C10—H10B | 109.5 |
| N1—C3—C4 | 120.98 (12) | C7—C10—H10C | 109.5 |
| C5—C4—C9 | 118.72 (12) | H10A—C10—H10C | 109.5 |
| C5—C4—C3 | 119.75 (13) | H10B—C10—H10C | 109.5 |
| C9—C4—C3 | 121.53 (13) | ||
| C3—N2—C1—C2 | −5.19 (16) | C9—C4—C5—C6 | −1.2 (2) |
| C3—N1—C2—C1 | −11.95 (15) | C3—C4—C5—C6 | 179.46 (14) |
| N2—C1—C2—N1 | 10.31 (15) | C4—C5—C6—C7 | 0.1 (2) |
| C1—N2—C3—N1 | −2.84 (18) | C5—C6—C7—C8 | 1.1 (2) |
| C1—N2—C3—C4 | 179.35 (13) | C5—C6—C7—C10 | −178.05 (14) |
| C2—N1—C3—N2 | 10.16 (18) | C6—C7—C8—C9 | −1.2 (2) |
| C2—N1—C3—C4 | −171.99 (13) | C10—C7—C8—C9 | 177.91 (14) |
| N2—C3—C4—C5 | −1.8 (2) | C7—C8—C9—C4 | 0.2 (2) |
| N1—C3—C4—C5 | −179.56 (14) | C5—C4—C9—C8 | 1.0 (2) |
| N2—C3—C4—C9 | 178.80 (15) | C3—C4—C9—C8 | −179.62 (14) |
| N1—C3—C4—C9 | 1.1 (2) |
| H··· | ||||
| N1—H1N1···N2i | 0.87 (3) | 2.06 (3) | 2.9224 (18) | 170 (2) |
| C10—H10B···Cg1ii | 0.96 | 2.88 | 3.8110 (16) | 163 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.87 (3) | 2.06 (3) | 2.9224 (18) | 170 (2) |
| C10—H10 | 0.96 | 2.88 | 3.8110 (16) | 163 |
Symmetry codes: (i) ; (ii) . Cg1 is the cetroid of the N1/C2/C1/N2/C3 ring.