Literature DB >> 21582461

2-(5-Bromo-3-methyl-sulfinyl-1-benzofuran-2-yl)acetic acid.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(11)H(9)BrO(4)S, the O atom and the methyl group of the methyl-sulfinyl substituent lie on opposite sides of the plane of the benzofuran fragment. The crystal structure is stabilized by inter-molecular O-H⋯O and C-H⋯O inter-actions. In addition, the crystal structure exhibits a Br⋯π inter-action of 3.551 (3) Å between the Br atom and the centroid of the benzene ring of an adjacent mol-ecule.

Entities:  

Year:  2009        PMID: 21582461      PMCID: PMC2968847          DOI: 10.1107/S1600536809008101

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 2-(5-bromo-3-methyl­sulfinyl-1-benzofuran-2-yl)acetic acid derivatives, see: Choi et al. (2008 ▶, 2009 ▶).

Experimental

Crystal data

C11H9BrO4S M = 317.15 Orthorhombic, a = 7.7646 (7) Å b = 16.304 (2) Å c = 18.993 (2) Å V = 2404.4 (4) Å3 Z = 8 Mo Kα radiation μ = 3.59 mm−1 T = 298 K 0.60 × 0.60 × 0.40 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1999 ▶) T min = 0.130, T max = 0.233 13628 measured reflections 2621 independent reflections 2033 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.094 S = 1.05 2621 reflections 160 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.36 e Å−3 Δρmin = −0.85 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809008101/zl2184sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809008101/zl2184Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H9BrO4SF(000) = 1264
Mr = 317.15Dx = 1.752 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 4375 reflections
a = 7.7646 (7) Åθ = 2.5–26.9°
b = 16.304 (2) ŵ = 3.59 mm1
c = 18.993 (2) ÅT = 298 K
V = 2404.4 (4) Å3Block, colorless
Z = 80.60 × 0.60 × 0.40 mm
Bruker SMART CCD diffractometer2621 independent reflections
Radiation source: fine-focus sealed tube2033 reflections with I > 2σ(I)
graphiteRint = 0.030
Detector resolution: 10.0 pixels mm-1θmax = 27.0°, θmin = 2.1°
φ and ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Sheldrick, 1999)k = −17→20
Tmin = 0.130, Tmax = 0.233l = −22→24
13628 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: difference Fourier map
wR(F2) = 0.094H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0414P)2 + 2.2996P] where P = (Fo2 + 2Fc2)/3
2621 reflections(Δ/σ)max = 0.001
160 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.85 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br0.09253 (6)0.55548 (3)0.70463 (2)0.07726 (18)
S0.61529 (8)0.28188 (4)0.61833 (4)0.03288 (16)
O10.7445 (2)0.49916 (11)0.54672 (9)0.0373 (4)
O21.1855 (3)0.32375 (15)0.53576 (12)0.0489 (6)
H2A1.252 (5)0.306 (2)0.5603 (19)0.057 (12)*
O31.0177 (3)0.32808 (17)0.62986 (11)0.0634 (7)
O40.4277 (2)0.26028 (12)0.61107 (13)0.0511 (6)
C10.6340 (3)0.38564 (15)0.59570 (13)0.0296 (5)
C20.5212 (3)0.45323 (15)0.61355 (13)0.0290 (5)
C30.3678 (3)0.46237 (16)0.65037 (14)0.0340 (6)
H30.31260.41790.67110.041*
C40.3016 (4)0.54037 (17)0.65473 (14)0.0380 (6)
C50.3810 (4)0.60866 (17)0.62502 (14)0.0402 (6)
H50.33220.66030.63060.048*
C60.5312 (4)0.60005 (17)0.58753 (15)0.0398 (6)
H60.58570.64460.56670.048*
C70.5968 (3)0.52154 (17)0.58250 (14)0.0328 (5)
C80.7617 (3)0.41652 (16)0.55538 (13)0.0321 (6)
C90.9129 (3)0.37869 (18)0.51972 (15)0.0386 (6)
H9A0.96960.42020.49140.046*
H9B0.87230.33620.48810.046*
C101.0426 (3)0.34198 (16)0.56920 (14)0.0343 (6)
C110.6508 (4)0.2897 (2)0.71079 (15)0.0524 (8)
H11A0.57540.33050.73020.079*
H11B0.76830.30500.71940.079*
H11C0.62780.23770.73260.079*
U11U22U33U12U13U23
Br0.0694 (3)0.0723 (3)0.0901 (3)0.0299 (2)0.0476 (2)0.0178 (2)
S0.0288 (3)0.0292 (3)0.0406 (4)0.0017 (3)−0.0038 (3)0.0007 (3)
O10.0305 (9)0.0365 (10)0.0447 (10)−0.0004 (8)0.0068 (8)0.0059 (8)
O20.0321 (11)0.0708 (15)0.0437 (12)0.0153 (10)0.0048 (10)0.0039 (11)
O30.0390 (12)0.109 (2)0.0421 (13)0.0163 (13)0.0062 (10)0.0189 (12)
O40.0328 (11)0.0399 (11)0.0808 (16)−0.0076 (9)−0.0157 (10)0.0114 (11)
C10.0264 (12)0.0309 (13)0.0315 (12)−0.0004 (10)−0.0016 (10)−0.0007 (10)
C20.0292 (12)0.0289 (12)0.0288 (12)0.0004 (10)−0.0018 (10)0.0008 (10)
C30.0318 (14)0.0356 (14)0.0346 (14)0.0005 (11)0.0045 (11)0.0029 (11)
C40.0351 (15)0.0472 (17)0.0317 (14)0.0101 (12)0.0068 (11)0.0007 (12)
C50.0464 (16)0.0339 (14)0.0404 (15)0.0110 (12)0.0005 (12)0.0010 (12)
C60.0443 (16)0.0309 (14)0.0443 (16)−0.0001 (12)0.0012 (13)0.0062 (12)
C70.0284 (13)0.0365 (14)0.0334 (13)−0.0001 (11)0.0013 (10)0.0016 (11)
C80.0289 (13)0.0342 (13)0.0333 (14)0.0047 (10)−0.0007 (10)0.0006 (10)
C90.0325 (14)0.0473 (16)0.0360 (14)0.0075 (12)0.0039 (11)0.0009 (12)
C100.0274 (13)0.0380 (14)0.0375 (15)−0.0020 (11)0.0023 (11)−0.0014 (12)
C110.0490 (18)0.068 (2)0.0403 (16)−0.0029 (16)−0.0024 (14)0.0116 (15)
Br—C41.896 (3)C3—H30.9300
S—O41.5051 (19)C4—C51.392 (4)
S—C11.752 (3)C5—C61.374 (4)
S—C111.782 (3)C5—H50.9300
O1—C81.364 (3)C6—C71.381 (4)
O1—C71.382 (3)C6—H60.9300
O2—C101.313 (3)C8—C91.490 (3)
O2—H2A0.76 (4)C9—C101.502 (4)
O3—C101.190 (3)C9—H9A0.9700
C1—C81.350 (3)C9—H9B0.9700
C1—C21.448 (3)C11—H11A0.9600
C2—C31.389 (4)C11—H11B0.9600
C2—C71.391 (4)C11—H11C0.9600
C3—C41.374 (4)
O4—S—C1106.49 (12)C7—C6—H6121.8
O4—S—C11104.87 (15)C6—C7—O1125.8 (2)
C1—S—C1199.22 (15)C6—C7—C2123.9 (2)
C8—O1—C7106.42 (19)O1—C7—C2110.4 (2)
C10—O2—H2A112 (3)C1—C8—O1111.4 (2)
C8—C1—C2107.1 (2)C1—C8—C9133.0 (3)
C8—C1—S124.1 (2)O1—C8—C9115.5 (2)
C2—C1—S128.86 (19)C8—C9—C10114.1 (2)
C3—C2—C7119.3 (2)C8—C9—H9A108.7
C3—C2—C1135.9 (2)C10—C9—H9A108.7
C7—C2—C1104.7 (2)C8—C9—H9B108.7
C4—C3—C2116.8 (2)C10—C9—H9B108.7
C4—C3—H3121.6H9A—C9—H9B107.6
C2—C3—H3121.6O3—C10—O2124.3 (3)
C3—C4—C5123.4 (2)O3—C10—C9124.9 (3)
C3—C4—Br118.1 (2)O2—C10—C9110.7 (2)
C5—C4—Br118.6 (2)S—C11—H11A109.5
C6—C5—C4120.3 (3)S—C11—H11B109.5
C6—C5—H5119.9H11A—C11—H11B109.5
C4—C5—H5119.9S—C11—H11C109.5
C5—C6—C7116.4 (3)H11A—C11—H11C109.5
C5—C6—H6121.8H11B—C11—H11C109.5
O4—S—C1—C8−137.7 (2)C8—O1—C7—C6179.9 (3)
C11—S—C1—C8113.7 (2)C8—O1—C7—C2−0.1 (3)
O4—S—C1—C240.9 (3)C3—C2—C7—C62.0 (4)
C11—S—C1—C2−67.7 (3)C1—C2—C7—C6−179.0 (3)
C8—C1—C2—C3177.3 (3)C3—C2—C7—O1−178.1 (2)
S—C1—C2—C3−1.5 (5)C1—C2—C7—O10.9 (3)
C8—C1—C2—C7−1.5 (3)C2—C1—C8—O11.5 (3)
S—C1—C2—C7179.8 (2)S—C1—C8—O1−179.63 (18)
C7—C2—C3—C4−1.2 (4)C2—C1—C8—C9−178.5 (3)
C1—C2—C3—C4−179.8 (3)S—C1—C8—C90.4 (4)
C2—C3—C4—C5−0.6 (4)C7—O1—C8—C1−0.9 (3)
C2—C3—C4—Br−179.94 (19)C7—O1—C8—C9179.1 (2)
C3—C4—C5—C61.7 (4)C1—C8—C9—C10−64.2 (4)
Br—C4—C5—C6−179.0 (2)O1—C8—C9—C10115.8 (3)
C4—C5—C6—C7−0.9 (4)C8—C9—C10—O314.6 (4)
C5—C6—C7—O1179.2 (2)C8—C9—C10—O2−168.3 (2)
C5—C6—C7—C2−0.9 (4)
D—H···AD—HH···AD···AD—H···A
O2—H2A···O4i0.76 (4)1.83 (4)2.579 (3)174 (4)
C5—H5···O4ii0.932.623.453 (3)150
C6—H6···O2iii0.932.683.444 (4)140
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2A⋯O4i0.76 (4)1.83 (4)2.579 (3)174 (4)
C5—H5⋯O4ii0.932.623.453 (3)150
C6—H6⋯O2iii0.932.683.444 (4)140

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Methyl 2-(5-bromo-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-20

3.  Propyl 2-(5-bromo-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-13
  3 in total
  1 in total

1.  2-(5-Bromo-3-isopropyl-sulfanyl-1-benzofuran-2-yl)acetic acid.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-10
  1 in total

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