| Literature DB >> 21582120 |
P Ramesh, A Subbiahpandi, P Thirumurugan, Paramasivan T Perumal, M N Ponnuswamy.
Abstract
The title compound, C(11)H(8)N(2)O, crystallizes with two crystallographically independent mol-ecules in the asymmetric unit which are approximately perpendicular to each other [79.97 (6)°]. The indole ring system is planar [r.m.s. deviation = 0.010 (1) Å]. The crystal structure is stabilized by inter-molecular C-H⋯N and N-H⋯O inter-actions.Entities:
Year: 2009 PMID: 21582120 PMCID: PMC2968615 DOI: 10.1107/S1600536809001342
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H8N2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3554 reflections | |
| θ = 1.1–25.0° | |
| µ = 0.09 mm−1 | |
| α = 83.402 (2)° | |
| β = 78.890 (2)° | Block, colourless |
| γ = 73.501 (1)° | 0.30 × 0.30 × 0.20 mm |
| Bruker Kappa APEXII area-detector diffractometer | 3253 independent reflections |
| Radiation source: fine-focus sealed tube | 2717 reflections with |
| graphite | |
| ω and φ scans | θmax = 25.0°, θmin = 1.1° |
| Absorption correction: multi-scan ( | |
| 18838 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3253 reflections | (Δ/σ)max = 0.008 |
| 253 parameters | Δρmax = 0.12 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.13478 (16) | 0.2464 (2) | 1.01403 (7) | 0.0659 (4) | |
| O1' | 0.76317 (17) | 0.33368 (14) | 0.47980 (6) | 0.0543 (3) | |
| N1 | 0.7573 (2) | 0.2397 (2) | 1.00692 (9) | 0.0619 (4) | |
| H1 | 0.8678 | 0.2314 | 1.0183 | 0.074* | |
| N1' | 0.77718 (19) | −0.28849 (17) | 0.48288 (7) | 0.0479 (3) | |
| H1' | 0.7932 | −0.4024 | 0.4709 | 0.057* | |
| C2 | 0.6023 (2) | 0.2202 (2) | 1.05570 (11) | 0.0567 (4) | |
| H2 | 0.5977 | 0.1956 | 1.1071 | 0.068* | |
| C2' | 0.8188 (2) | −0.1468 (2) | 0.43593 (9) | 0.0441 (4) | |
| H2' | 0.8689 | −0.1567 | 0.3853 | 0.053* | |
| C3 | 0.4501 (2) | 0.2418 (2) | 1.01850 (9) | 0.0475 (4) | |
| C3' | 0.7768 (2) | 0.01550 (19) | 0.47349 (8) | 0.0385 (3) | |
| C4 | 0.5195 (2) | 0.2786 (2) | 0.94094 (9) | 0.0478 (4) | |
| C4' | 0.7012 (2) | −0.03211 (19) | 0.54959 (8) | 0.0389 (3) | |
| C5' | 0.6267 (2) | 0.0675 (2) | 0.61400 (9) | 0.0479 (4) | |
| H5' | 0.6214 | 0.1956 | 0.6133 | 0.058* | |
| C5 | 0.4391 (2) | 0.3141 (2) | 0.87583 (10) | 0.0565 (4) | |
| H5 | 0.3107 | 0.3175 | 0.8777 | 0.068* | |
| C6' | 0.5613 (3) | −0.0269 (2) | 0.67853 (9) | 0.0569 (4) | |
| H6' | 0.5098 | 0.0389 | 0.7216 | 0.068* | |
| C6 | 0.5521 (3) | 0.3437 (3) | 0.80899 (11) | 0.0678 (5) | |
| H6 | 0.4991 | 0.3687 | 0.7653 | 0.081* | |
| C7' | 0.5702 (3) | −0.2187 (2) | 0.68090 (10) | 0.0583 (4) | |
| H7' | 0.5269 | −0.2792 | 0.7257 | 0.070* | |
| C7 | 0.7456 (3) | 0.3370 (3) | 0.80531 (13) | 0.0742 (6) | |
| H7 | 0.8195 | 0.3559 | 0.7591 | 0.089* | |
| C8' | 0.6417 (2) | −0.3200 (2) | 0.61849 (10) | 0.0527 (4) | |
| H8' | 0.6475 | −0.4483 | 0.6199 | 0.063* | |
| C8 | 0.8287 (3) | 0.3032 (3) | 0.86844 (13) | 0.0684 (5) | |
| H8 | 0.9574 | 0.2993 | 0.8660 | 0.082* | |
| C9 | 0.7140 (2) | 0.2751 (2) | 0.93550 (11) | 0.0540 (4) | |
| C9' | 0.7049 (2) | −0.2241 (2) | 0.55332 (8) | 0.0419 (3) | |
| C10 | 0.2612 (2) | 0.2273 (2) | 1.05110 (9) | 0.0482 (4) | |
| C10' | 0.8024 (2) | 0.19645 (19) | 0.44251 (8) | 0.0396 (3) | |
| C11' | 0.8851 (2) | 0.2118 (2) | 0.35992 (8) | 0.0455 (4) | |
| H11A | 1.0210 | 0.1451 | 0.3524 | 0.055* | |
| H11B | 0.8214 | 0.1505 | 0.3322 | 0.055* | |
| C11 | 0.2210 (2) | 0.1842 (3) | 1.13506 (9) | 0.0562 (4) | |
| H11C | 0.3072 | 0.0628 | 1.1480 | 0.067* | |
| H11D | 0.2474 | 0.2809 | 1.1602 | 0.067* | |
| C12 | 0.0245 (3) | 0.1779 (3) | 1.16141 (9) | 0.0605 (5) | |
| C12' | 0.8620 (2) | 0.4067 (2) | 0.33086 (9) | 0.0513 (4) | |
| N13 | −0.1297 (3) | 0.1725 (3) | 1.18193 (9) | 0.0878 (6) | |
| N13' | 0.8429 (3) | 0.5597 (2) | 0.30820 (9) | 0.0806 (5) |
| O1 | 0.0436 (6) | 0.1027 (10) | 0.0585 (7) | −0.0291 (6) | −0.0166 (6) | 0.0039 (7) |
| O1' | 0.0829 (8) | 0.0340 (6) | 0.0491 (6) | −0.0248 (5) | −0.0035 (6) | −0.0054 (5) |
| N1 | 0.0409 (8) | 0.0647 (9) | 0.0868 (11) | −0.0155 (7) | −0.0217 (8) | −0.0100 (8) |
| N1' | 0.0611 (8) | 0.0298 (6) | 0.0566 (8) | −0.0163 (6) | −0.0112 (6) | −0.0059 (6) |
| C2 | 0.0469 (9) | 0.0597 (10) | 0.0689 (11) | −0.0150 (8) | −0.0187 (8) | −0.0087 (8) |
| C2' | 0.0521 (9) | 0.0379 (8) | 0.0453 (8) | −0.0158 (6) | −0.0082 (7) | −0.0056 (6) |
| C3 | 0.0412 (8) | 0.0451 (9) | 0.0602 (10) | −0.0126 (7) | −0.0144 (7) | −0.0072 (7) |
| C3' | 0.0432 (8) | 0.0323 (7) | 0.0435 (8) | −0.0136 (6) | −0.0109 (6) | −0.0027 (6) |
| C4 | 0.0420 (8) | 0.0367 (8) | 0.0674 (11) | −0.0124 (6) | −0.0128 (7) | −0.0038 (7) |
| C4' | 0.0409 (8) | 0.0333 (7) | 0.0461 (8) | −0.0130 (6) | −0.0123 (6) | −0.0011 (6) |
| C5' | 0.0566 (9) | 0.0388 (8) | 0.0501 (9) | −0.0144 (7) | −0.0095 (7) | −0.0043 (7) |
| C5 | 0.0509 (9) | 0.0527 (10) | 0.0689 (11) | −0.0184 (8) | −0.0160 (8) | 0.0048 (8) |
| C6' | 0.0671 (11) | 0.0573 (10) | 0.0458 (9) | −0.0172 (8) | −0.0067 (8) | −0.0043 (8) |
| C6 | 0.0761 (13) | 0.0590 (11) | 0.0706 (13) | −0.0260 (9) | −0.0147 (10) | 0.0103 (9) |
| C7' | 0.0656 (11) | 0.0587 (11) | 0.0514 (10) | −0.0237 (8) | −0.0092 (8) | 0.0103 (8) |
| C7 | 0.0741 (13) | 0.0641 (12) | 0.0810 (14) | −0.0287 (10) | 0.0052 (11) | 0.0041 (10) |
| C8' | 0.0611 (10) | 0.0385 (8) | 0.0623 (11) | −0.0213 (7) | −0.0151 (8) | 0.0093 (7) |
| C8 | 0.0486 (10) | 0.0584 (11) | 0.0983 (16) | −0.0215 (8) | −0.0032 (10) | −0.0021 (10) |
| C9 | 0.0424 (9) | 0.0429 (9) | 0.0794 (12) | −0.0144 (7) | −0.0114 (8) | −0.0055 (8) |
| C9' | 0.0443 (8) | 0.0348 (7) | 0.0498 (9) | −0.0136 (6) | −0.0119 (7) | −0.0016 (6) |
| C10 | 0.0438 (8) | 0.0472 (9) | 0.0576 (10) | −0.0131 (7) | −0.0148 (7) | −0.0065 (7) |
| C10' | 0.0432 (8) | 0.0347 (7) | 0.0446 (8) | −0.0140 (6) | −0.0106 (6) | −0.0026 (6) |
| C11' | 0.0512 (9) | 0.0421 (8) | 0.0451 (9) | −0.0155 (7) | −0.0081 (7) | −0.0026 (7) |
| C11 | 0.0554 (10) | 0.0621 (10) | 0.0551 (10) | −0.0163 (8) | −0.0154 (8) | −0.0085 (8) |
| C12 | 0.0591 (12) | 0.0765 (12) | 0.0430 (9) | −0.0117 (9) | −0.0078 (8) | −0.0100 (8) |
| C12' | 0.0641 (10) | 0.0487 (10) | 0.0432 (9) | −0.0227 (8) | −0.0044 (8) | 0.0001 (7) |
| N13 | 0.0640 (11) | 0.1429 (18) | 0.0513 (10) | −0.0231 (11) | −0.0009 (8) | −0.0111 (10) |
| N13' | 0.1215 (15) | 0.0564 (10) | 0.0620 (10) | −0.0331 (10) | −0.0029 (10) | 0.0065 (8) |
| O1—C10 | 1.2190 (18) | C5—H5 | 0.9300 |
| O1'—C10' | 1.2173 (17) | C6'—C7' | 1.389 (2) |
| N1—C2 | 1.335 (2) | C6'—H6' | 0.9300 |
| N1—C9 | 1.379 (2) | C6—C7 | 1.396 (3) |
| N1—H1 | 0.8600 | C6—H6 | 0.9300 |
| N1'—C2' | 1.3372 (19) | C7'—C8' | 1.367 (2) |
| N1'—C9' | 1.3755 (19) | C7'—H7' | 0.9300 |
| N1'—H1' | 0.8600 | C7—C8 | 1.371 (3) |
| C2—C3 | 1.379 (2) | C7—H7 | 0.9300 |
| C2—H2 | 0.9300 | C8'—C9' | 1.381 (2) |
| C2'—C3' | 1.373 (2) | C8'—H8' | 0.9300 |
| C2'—H2' | 0.9300 | C8—C9 | 1.376 (3) |
| C3—C10 | 1.429 (2) | C8—H8 | 0.9300 |
| C3—C4 | 1.431 (2) | C10—C11 | 1.517 (2) |
| C3'—C10' | 1.4331 (19) | C10'—C11' | 1.516 (2) |
| C3'—C4' | 1.436 (2) | C11'—C12' | 1.445 (2) |
| C4—C5 | 1.393 (2) | C11'—H11A | 0.9700 |
| C4—C9 | 1.406 (2) | C11'—H11B | 0.9700 |
| C4'—C5' | 1.393 (2) | C11—C12 | 1.443 (3) |
| C4'—C9' | 1.3987 (19) | C11—H11C | 0.9700 |
| C5'—C6' | 1.372 (2) | C11—H11D | 0.9700 |
| C5'—H5' | 0.9300 | C12—N13 | 1.133 (2) |
| C5—C6 | 1.369 (3) | C12'—N13' | 1.132 (2) |
| C2—N1—C9 | 109.94 (14) | C8'—C7'—H7' | 119.4 |
| C2—N1—H1 | 125.0 | C6'—C7'—H7' | 119.4 |
| C9—N1—H1 | 125.0 | C8—C7—C6 | 121.35 (19) |
| C2'—N1'—C9' | 109.56 (12) | C8—C7—H7 | 119.3 |
| C2'—N1'—H1' | 125.2 | C6—C7—H7 | 119.3 |
| C9'—N1'—H1' | 125.2 | C7'—C8'—C9' | 117.34 (15) |
| N1—C2—C3 | 109.81 (16) | C7'—C8'—H8' | 121.3 |
| N1—C2—H2 | 125.1 | C9'—C8'—H8' | 121.3 |
| C3—C2—H2 | 125.1 | C7—C8—C9 | 117.29 (18) |
| N1'—C2'—C3' | 110.07 (14) | C7—C8—H8 | 121.4 |
| N1'—C2'—H2' | 125.0 | C9—C8—H8 | 121.4 |
| C3'—C2'—H2' | 125.0 | C8—C9—N1 | 130.03 (16) |
| C2—C3—C10 | 126.55 (16) | C8—C9—C4 | 122.72 (17) |
| C2—C3—C4 | 106.56 (14) | N1—C9—C4 | 107.25 (15) |
| C10—C3—C4 | 126.89 (14) | N1'—C9'—C8' | 129.55 (14) |
| C2'—C3'—C10' | 126.66 (14) | N1'—C9'—C4' | 107.66 (13) |
| C2'—C3'—C4' | 106.34 (12) | C8'—C9'—C4' | 122.78 (14) |
| C10'—C3'—C4' | 126.99 (13) | O1—C10—C3 | 122.51 (15) |
| C5—C4—C9 | 118.60 (16) | O1—C10—C11 | 119.87 (15) |
| C5—C4—C3 | 134.95 (15) | C3—C10—C11 | 117.61 (13) |
| C9—C4—C3 | 106.45 (14) | O1'—C10'—C3' | 122.74 (13) |
| C5'—C4'—C9' | 118.54 (13) | O1'—C10'—C11' | 120.06 (13) |
| C5'—C4'—C3' | 135.07 (13) | C3'—C10'—C11' | 117.20 (12) |
| C9'—C4'—C3' | 106.36 (12) | C12'—C11'—C10' | 112.33 (13) |
| C6'—C5'—C4' | 118.70 (14) | C12'—C11'—H11A | 109.1 |
| C6'—C5'—H5' | 120.6 | C10'—C11'—H11A | 109.1 |
| C4'—C5'—H5' | 120.6 | C12'—C11'—H11B | 109.1 |
| C6—C5—C4 | 118.94 (17) | C10'—C11'—H11B | 109.1 |
| C6—C5—H5 | 120.5 | H11A—C11'—H11B | 107.9 |
| C4—C5—H5 | 120.5 | C12—C11—C10 | 112.34 (14) |
| C5'—C6'—C7' | 121.46 (16) | C12—C11—H11C | 109.1 |
| C5'—C6'—H6' | 119.3 | C10—C11—H11C | 109.1 |
| C7'—C6'—H6' | 119.3 | C12—C11—H11D | 109.1 |
| C5—C6—C7 | 121.09 (19) | C10—C11—H11D | 109.1 |
| C5—C6—H6 | 119.5 | H11C—C11—H11D | 107.9 |
| C7—C6—H6 | 119.5 | N13—C12—C11 | 179.8 (2) |
| C8'—C7'—C6' | 121.15 (16) | N13'—C12'—C11' | 179.6 (2) |
| C9—N1—C2—C3 | 0.0 (2) | C2—N1—C9—C4 | 0.35 (18) |
| C9'—N1'—C2'—C3' | 0.34 (17) | C5—C4—C9—C8 | −0.7 (2) |
| N1—C2—C3—C10 | 178.76 (15) | C3—C4—C9—C8 | 179.28 (15) |
| N1—C2—C3—C4 | −0.41 (19) | C5—C4—C9—N1 | 179.39 (14) |
| N1'—C2'—C3'—C10' | 179.69 (14) | C3—C4—C9—N1 | −0.59 (17) |
| N1'—C2'—C3'—C4' | −0.69 (17) | C2'—N1'—C9'—C8' | 179.31 (16) |
| C2—C3—C4—C5 | −179.36 (17) | C2'—N1'—C9'—C4' | 0.18 (17) |
| C10—C3—C4—C5 | 1.5 (3) | C7'—C8'—C9'—N1' | −177.93 (15) |
| C2—C3—C4—C9 | 0.61 (17) | C7'—C8'—C9'—C4' | 1.1 (2) |
| C10—C3—C4—C9 | −178.56 (15) | C5'—C4'—C9'—N1' | 177.78 (13) |
| C2'—C3'—C4'—C5' | −177.20 (16) | C3'—C4'—C9'—N1' | −0.59 (16) |
| C10'—C3'—C4'—C5' | 2.4 (3) | C5'—C4'—C9'—C8' | −1.4 (2) |
| C2'—C3'—C4'—C9' | 0.78 (16) | C3'—C4'—C9'—C8' | −179.80 (14) |
| C10'—C3'—C4'—C9' | −179.60 (14) | C2—C3—C10—O1 | −179.17 (16) |
| C9'—C4'—C5'—C6' | 0.4 (2) | C4—C3—C10—O1 | −0.2 (3) |
| C3'—C4'—C5'—C6' | 178.23 (16) | C2—C3—C10—C11 | 0.1 (2) |
| C9—C4—C5—C6 | 0.2 (2) | C4—C3—C10—C11 | 179.09 (15) |
| C3—C4—C5—C6 | −179.88 (17) | C2'—C3'—C10'—O1' | −179.31 (15) |
| C4'—C5'—C6'—C7' | 0.8 (3) | C4'—C3'—C10'—O1' | 1.1 (2) |
| C4—C5—C6—C7 | 0.6 (3) | C2'—C3'—C10'—C11' | −0.3 (2) |
| C5'—C6'—C7'—C8' | −1.2 (3) | C4'—C3'—C10'—C11' | −179.83 (13) |
| C5—C6—C7—C8 | −0.9 (3) | O1'—C10'—C11'—C12' | −14.8 (2) |
| C6'—C7'—C8'—C9' | 0.2 (3) | C3'—C10'—C11'—C12' | 166.12 (13) |
| C6—C7—C8—C9 | 0.3 (3) | O1—C10—C11—C12 | −2.2 (2) |
| C7—C8—C9—N1 | −179.67 (17) | C3—C10—C11—C12 | 178.56 (15) |
| C7—C8—C9—C4 | 0.5 (3) | C10—C11—C12—N13 | 51 (88) |
| C2—N1—C9—C8 | −179.50 (18) | C10'—C11'—C12'—N13' | −58 (25) |
| H··· | ||||
| N1—H1···O1i | 0.86 | 1.98 | 2.8146 (18) | 163 |
| C2—H2···N13i | 0.93 | 2.59 | 3.236 (2) | 127 |
| N1'—H1'···O1'ii | 0.86 | 2.00 | 2.8166 (15) | 158 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1i | 0.86 | 1.98 | 2.8146 (18) | 163 |
| C2—H2⋯N13i | 0.93 | 2.59 | 3.236 (2) | 127 |
| N1′—H1′⋯O1′ii | 0.86 | 2.00 | 2.8166 (15) | 158 |
Symmetry codes: (i) ; (ii) .