Literature DB >> 21582096

Guanidinium tetra-bromidomercurate(II).

Hiromitsu Terao, Thorsten M Gesing, Hideta Ishihara, Yoshihiro Furukawa, B Thimme Gowda.   

Abstract

The Hg atoms in the crystal structure of the title compound, (CH(6)N(3))(2)[HgBr(4)], are tetra-hedrally coordinated by four Br atoms and the resulting [HgBr(4)](2-) tetra-hedral ions are linked to the [C(NH(2))(3)](+) ions by bromine-hydrogen bonds, forming a three-dimensional network. In the structure, the anions are located on special positions. The two different Hg⋯Br distances of 2.664 (1) and 2.559 (1) Å observed in the tetra-bromidomercurate unit are due to the connection of Br atoms to different number of H atoms.

Entities:  

Year:  2009        PMID: 21582096      PMCID: PMC2968626          DOI: 10.1107/S1600536809005972

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the ability of the guanidinium ion to make hydrogen bonds and its unique planar shape, see: Terao et al. (2000 ▶). For related literature, see: Ishihara et al. (2002 ▶); Furukawa et al. (2005 ▶)

Experimental

Crystal data

(CH6N3)2[HgBr4] M = 640.41 Monoclinic, a = 10.035 (2) Å b = 11.164 (2) Å c = 13.358 (3) Å β = 111.67 (3)° V = 1390.7 (6) Å3 Z = 4 Mo Kα radiation μ = 22.53 mm−1 T = 298 K 0.09 × 0.09 × 0.09 mm

Data collection

Stoe IPDS-I diffractometer Absorption correction: none 9651 measured reflections 1361 independent reflections 982 reflections with I > 2σ(I) R int = 0.093

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.069 S = 0.90 1361 reflections 79 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.71 e Å−3 Δρmin = −1.03 e Å−3 Data collection: EXPOSE (Stoe & Cie, 1999 ▶); cell refinement: CELL (Stoe & Cie, 1999 ▶); data reduction: XPREP (Bruker, 2003 ▶); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL93 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Crystal Impact, 2008 ▶); software used to prepare material for publication: SHELXL93 (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809005972/bt2874sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005972/bt2874Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(CH6N3)2[HgBr4]F(000) = 1144
Mr = 640.41Dx = 3.059 Mg m3
Monoclinic, C2/cMelting point: not measured K
Hall symbol: -C 2ycMo Kα radiation, λ = 0.71073 Å
a = 10.035 (2) ÅCell parameters from 2000 reflections
b = 11.164 (2) Åθ = 2.9–26.1°
c = 13.358 (3) ŵ = 22.53 mm1
β = 111.67 (3)°T = 298 K
V = 1390.7 (6) Å3Cylindric, colourless transparent
Z = 40.09 × 0.09 × 0.09 mm
Stoe IPDS-I diffractometer982 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.093
graphiteθmax = 26.1°, θmin = 2.9°
imaging plate dynamic profile intergration scansh = −12→12
9651 measured reflectionsk = −13→13
1361 independent reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.069w = 1/[σ2(Fo2) + (0.0376P)2] where P = (Fo2 + 2Fc2)/3
S = 0.90(Δ/σ)max = 0.001
1361 reflectionsΔρmax = 0.71 e Å3
79 parametersΔρmin = −1.03 e Å3
6 restraintsExtinction correction: SHELXL93 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00077 (10)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Hg10.50000.71191 (4)0.25000.0577 (2)
Br10.30789 (8)0.86270 (7)0.27353 (7)0.0555 (2)
Br20.38905 (10)0.60032 (7)0.07086 (6)0.0635 (3)
C10.4454 (8)0.8215 (6)0.6018 (6)0.0492 (18)
N10.5515 (10)0.8736 (7)0.5829 (6)0.070 (2)
H1A0.592 (10)0.818 (7)0.558 (8)0.084*
H1B0.549 (10)0.950 (2)0.594 (8)0.084*
N20.4254 (7)0.7072 (6)0.5904 (6)0.0625 (17)
H2A0.363 (7)0.673 (8)0.612 (7)0.075*
H2B0.485 (8)0.665 (7)0.571 (7)0.075*
N30.3560 (9)0.8857 (7)0.6335 (7)0.075 (2)
H3A0.369 (11)0.960 (3)0.622 (8)0.090*
H3B0.278 (7)0.856 (9)0.636 (9)0.090*
U11U22U33U12U13U23
Hg10.0706 (3)0.0544 (3)0.0586 (3)0.0000.0359 (2)0.000
Br10.0569 (4)0.0485 (4)0.0714 (5)−0.0003 (3)0.0359 (4)−0.0070 (4)
Br20.0950 (6)0.0453 (5)0.0638 (5)−0.0062 (4)0.0454 (5)−0.0100 (4)
C10.051 (4)0.043 (4)0.043 (4)0.005 (3)0.005 (3)−0.006 (3)
N10.090 (5)0.054 (4)0.064 (5)−0.021 (4)0.026 (4)−0.001 (4)
N20.058 (4)0.052 (4)0.081 (5)−0.005 (3)0.030 (4)−0.011 (4)
N30.081 (5)0.063 (5)0.073 (5)0.011 (5)0.018 (5)−0.009 (4)
Hg1—Br22.5593 (10)N1—H1A0.87 (9)
Hg1—Br2i2.5593 (10)N1—H1B0.87 (9)
Hg1—Br12.6639 (9)N2—H2A0.87 (9)
Hg1—Br1i2.6639 (9)N2—H2B0.87 (9)
C1—N21.293 (10)N3—H3A0.87 (9)
C1—N11.316 (11)N3—H3B0.87 (9)
C1—N31.334 (11)
Br2—Hg1—Br2i121.74 (4)C1—N1—H1A107 (7)
Br2—Hg1—Br1109.51 (4)C1—N1—H1B109 (7)
Br2i—Hg1—Br1106.33 (3)H1A—N1—H1B144 (10)
Br2—Hg1—Br1i106.33 (3)C1—N2—H2A120 (6)
Br2i—Hg1—Br1i109.51 (4)C1—N2—H2B118 (7)
Br1—Hg1—Br1i101.62 (4)H2A—N2—H2B121 (9)
N2—C1—N1121.0 (8)C1—N3—H3A107 (8)
N2—C1—N3118.3 (8)C1—N3—H3B122 (8)
N1—C1—N3120.7 (7)H3A—N3—H3B125 (10)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Br2i0.87 (9)3.03 (4)3.845 (8)158 (9)
N1—H1B···Br1ii0.87 (9)2.77 (6)3.512 (7)144 (8)
N2—H2A···Br1iii0.87 (9)2.72 (4)3.541 (7)159 (8)
N2—H2B···Br2i0.87 (9)2.74 (4)3.535 (7)153 (8)
N3—H3A···Br1iv0.87 (9)3.05 (10)3.505 (8)115 (8)
N3—H3B···Br1iii0.87 (9)2.98 (8)3.667 (9)137 (9)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯Br2i0.87 (9)3.03 (4)3.845 (8)158 (9)
N1—H1B⋯Br1ii0.87 (9)2.77 (6)3.512 (7)144 (8)
N2—H2A⋯Br1iii0.87 (9)2.72 (4)3.541 (7)159 (8)
N2—H2B⋯Br2i0.87 (9)2.74 (4)3.535 (7)153 (8)
N3—H3A⋯Br1iv0.87 (9)3.05 (10)3.505 (8)115 (8)
N3—H3B⋯Br1iii0.87 (9)2.98 (8)3.667 (9)137 (9)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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1.  Ethyl-enediammonium tetra-bromido-mercurate(II) monohydrate.

Authors:  B Thimme Gowda; Sabine Foro; Hiromitsu Terao; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18

2.  Bis(guanidinium) tetra-iodidomercurate(II).

Authors:  Hiromitsu Terao; Thorsten M Gesing; Hideta Ishihara; Yoshihiro Furukawa; B Thimme Gowda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-10
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