| Literature DB >> 21581881 |
Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.
Abstract
In the title compound, C(15)H(17)IO(4)S, the O atom and the methyl group of the methyl-sulfinyl substituent lie on opposite sides of the plane of the benzofuran fragment. The crystal structure is stabilized by weak inter-molecular C-H⋯π inter-actions between a methyl H atom of the methyl-sulfinyl group and the benzene ring of the benzofuran system, and by an I⋯O halogen bond of 3.173 (3) Å and a nearly linear C-I⋯O angle of 171.7 (1)°. In addition, the crystal structure exhibits weak inter-molecular C-H⋯O hydrogen bonds. The O atom of the carbonyl group and the butyl chain are both disordered over two positions with site-occupancy factors from refinement of 0.55 (4) and 0.45 (4) (for the O atom), and 0.76 (2) and 0.24 (2) (for the butyl group).Entities:
Year: 2009 PMID: 21581881 PMCID: PMC2968330 DOI: 10.1107/S1600536809000208
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H17IO4S | |
| Monoclinic, | Mo |
| Hall symbol: -P_2yn | Cell parameters from 5617 reflections |
| θ = 2.3–28.1° | |
| µ = 2.01 mm−1 | |
| β = 100.669 (1)° | Block, colorless |
| 0.20 × 0.20 × 0.10 mm | |
| Bruker SMART CCD diffractometer | 3009 independent reflections |
| Radiation source: fine-focus sealed tube | 2581 reflections with |
| graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 25.0°, θmin = 2.3° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 8829 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H-atom parameters constrained | |
| 3009 reflections | (Δ/σ)max < 0.001 |
| 222 parameters | Δρmax = 0.71 e Å−3 |
| 43 restraints | Δρmin = −0.61 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| I | 0.98000 (3) | 0.639217 (19) | 0.38449 (3) | 0.07282 (14) | |
| S | 0.60101 (8) | 0.31517 (5) | 0.45617 (8) | 0.0460 (2) | |
| O1 | 0.4557 (2) | 0.45536 (17) | 0.1655 (2) | 0.0562 (6) | |
| O2 | 0.1138 (3) | 0.3286 (2) | 0.2161 (3) | 0.0849 (10) | |
| O3A | 0.2384 (15) | 0.4110 (13) | 0.3619 (13) | 0.074 (3) | 0.55 (4) |
| O3B | 0.2198 (16) | 0.4365 (10) | 0.323 (2) | 0.075 (4) | 0.45 (4) |
| O4 | 0.7434 (2) | 0.29309 (16) | 0.4707 (2) | 0.0588 (6) | |
| C1 | 0.5648 (3) | 0.3928 (2) | 0.3367 (3) | 0.0411 (7) | |
| C2 | 0.6417 (3) | 0.4674 (2) | 0.3106 (3) | 0.0404 (7) | |
| C3 | 0.7603 (3) | 0.5070 (2) | 0.3653 (3) | 0.0438 (7) | |
| H3 | 0.8119 | 0.4843 | 0.4384 | 0.053* | |
| C4 | 0.7992 (3) | 0.5803 (2) | 0.3085 (3) | 0.0520 (8) | |
| C5 | 0.7244 (4) | 0.6150 (3) | 0.2018 (4) | 0.0651 (10) | |
| H5 | 0.7551 | 0.6657 | 0.1658 | 0.078* | |
| C6 | 0.6077 (4) | 0.5773 (3) | 0.1483 (3) | 0.0628 (10) | |
| H6 | 0.5555 | 0.6009 | 0.0760 | 0.075* | |
| C7 | 0.5693 (3) | 0.5030 (2) | 0.2046 (3) | 0.0492 (8) | |
| C8 | 0.4576 (3) | 0.3885 (2) | 0.2479 (3) | 0.0474 (8) | |
| C9 | 0.3408 (3) | 0.3292 (3) | 0.2250 (4) | 0.0581 (9) | |
| H9A | 0.3645 | 0.2724 | 0.2668 | 0.070* | |
| H9B | 0.3165 | 0.3176 | 0.1360 | 0.070* | |
| C10 | 0.2236 (4) | 0.3677 (3) | 0.2695 (4) | 0.0609 (10) | |
| C12 | −0.1176 (4) | 0.3369 (5) | 0.1516 (6) | 0.121 (2) | |
| H12A | −0.1186 | 0.2744 | 0.1266 | 0.145* | 0.759 (19) |
| H12B | −0.2018 | 0.3484 | 0.1796 | 0.145* | 0.759 (19) |
| H12C | −0.0930 | 0.2748 | 0.1415 | 0.145* | 0.241 (19) |
| H12D | −0.2016 | 0.3407 | 0.1825 | 0.145* | 0.241 (19) |
| C13 | −0.1166 (8) | 0.3909 (7) | 0.0415 (9) | 0.180 (4) | |
| H13A | −0.0364 | 0.3789 | 0.0069 | 0.216* | 0.759 (19) |
| H13B | −0.1186 | 0.4543 | 0.0614 | 0.216* | 0.759 (19) |
| H13C | −0.0345 | 0.3687 | 0.0178 | 0.216* | 0.241 (19) |
| H13D | −0.0905 | 0.4483 | 0.0808 | 0.216* | 0.241 (19) |
| C11A | −0.0090 (6) | 0.3482 (8) | 0.2583 (7) | 0.077 (2) | 0.759 (19) |
| H11A | −0.0077 | 0.4093 | 0.2894 | 0.092* | 0.759 (19) |
| H11B | −0.0208 | 0.3077 | 0.3251 | 0.092* | 0.759 (19) |
| C14A | −0.2370 (12) | 0.3655 (11) | −0.0466 (14) | 0.175 (6) | 0.759 (19) |
| H14A | −0.3089 | 0.4062 | −0.0392 | 0.263* | 0.759 (19) |
| H14B | −0.2627 | 0.3056 | −0.0286 | 0.263* | 0.759 (19) |
| H14C | −0.2191 | 0.3679 | −0.1301 | 0.263* | 0.759 (19) |
| C11B | −0.0098 (17) | 0.3900 (18) | 0.223 (3) | 0.077 (7) | 0.241 (19) |
| H11C | −0.0222 | 0.3983 | 0.3089 | 0.093* | 0.241 (19) |
| H11D | −0.0017 | 0.4480 | 0.1851 | 0.093* | 0.241 (19) |
| C14B | −0.185 (4) | 0.424 (3) | −0.0790 (17) | 0.141 (14) | 0.241 (19) |
| H14D | −0.2681 | 0.3920 | −0.1041 | 0.211* | 0.241 (19) |
| H14E | −0.1284 | 0.4149 | −0.1399 | 0.211* | 0.241 (19) |
| H14F | −0.2034 | 0.4869 | −0.0728 | 0.211* | 0.241 (19) |
| C15 | 0.5826 (5) | 0.3860 (3) | 0.5804 (3) | 0.0654 (10) | |
| H15A | 0.6071 | 0.3541 | 0.6579 | 0.098* | |
| H15B | 0.4904 | 0.4053 | 0.5705 | 0.098* | |
| H15C | 0.6400 | 0.4374 | 0.5807 | 0.098* |
| I | 0.06107 (19) | 0.0672 (2) | 0.0881 (2) | −0.02167 (12) | 0.00823 (14) | 0.01316 (14) |
| S | 0.0464 (4) | 0.0356 (4) | 0.0542 (5) | −0.0007 (3) | 0.0051 (4) | −0.0015 (3) |
| O1 | 0.0494 (13) | 0.0693 (16) | 0.0437 (13) | 0.0025 (12) | −0.0075 (10) | −0.0056 (12) |
| O2 | 0.0446 (14) | 0.110 (2) | 0.097 (2) | −0.0015 (15) | 0.0058 (14) | −0.053 (2) |
| O3A | 0.072 (5) | 0.087 (6) | 0.064 (5) | −0.013 (5) | 0.016 (4) | −0.030 (4) |
| O3B | 0.069 (5) | 0.068 (5) | 0.088 (7) | 0.000 (4) | 0.014 (5) | −0.030 (5) |
| O4 | 0.0513 (14) | 0.0568 (15) | 0.0648 (15) | 0.0124 (11) | 0.0019 (11) | 0.0010 (12) |
| C1 | 0.0395 (16) | 0.0378 (15) | 0.0440 (17) | 0.0028 (13) | 0.0030 (13) | −0.0046 (13) |
| C2 | 0.0405 (16) | 0.0447 (17) | 0.0350 (15) | 0.0049 (13) | 0.0045 (12) | −0.0031 (13) |
| C3 | 0.0431 (17) | 0.0464 (18) | 0.0406 (16) | 0.0009 (14) | 0.0044 (13) | 0.0022 (14) |
| C4 | 0.0506 (19) | 0.052 (2) | 0.053 (2) | −0.0045 (16) | 0.0100 (15) | 0.0052 (16) |
| C5 | 0.075 (3) | 0.062 (2) | 0.060 (2) | −0.003 (2) | 0.015 (2) | 0.0218 (19) |
| C6 | 0.069 (2) | 0.075 (3) | 0.0423 (19) | 0.006 (2) | 0.0048 (17) | 0.0150 (18) |
| C7 | 0.0499 (19) | 0.057 (2) | 0.0394 (17) | 0.0066 (16) | 0.0057 (14) | −0.0018 (15) |
| C8 | 0.0426 (17) | 0.0495 (18) | 0.0475 (18) | 0.0035 (14) | 0.0013 (14) | −0.0100 (15) |
| C9 | 0.0427 (18) | 0.057 (2) | 0.069 (2) | 0.0006 (16) | −0.0049 (16) | −0.0229 (18) |
| C10 | 0.051 (2) | 0.065 (2) | 0.066 (2) | −0.0061 (17) | 0.0064 (18) | −0.0211 (19) |
| C12 | 0.053 (3) | 0.160 (6) | 0.149 (6) | 0.002 (3) | 0.021 (3) | −0.065 (5) |
| C13 | 0.152 (8) | 0.215 (10) | 0.166 (9) | 0.103 (8) | 0.010 (7) | 0.029 (8) |
| C11A | 0.049 (3) | 0.095 (6) | 0.087 (4) | 0.004 (3) | 0.016 (3) | −0.018 (4) |
| C14A | 0.148 (8) | 0.195 (10) | 0.167 (9) | 0.043 (7) | −0.010 (7) | −0.002 (7) |
| C11B | 0.064 (9) | 0.088 (11) | 0.084 (11) | 0.011 (8) | 0.023 (8) | −0.007 (8) |
| C14B | 0.142 (16) | 0.142 (16) | 0.139 (16) | 0.015 (10) | 0.027 (10) | 0.012 (9) |
| C15 | 0.090 (3) | 0.058 (2) | 0.051 (2) | 0.010 (2) | 0.022 (2) | −0.0034 (18) |
| I—C4 | 2.098 (4) | C9—H9B | 0.9900 |
| I—O4i | 13.531 (3) | C12—C13 | 1.476 (11) |
| S—O4 | 1.484 (2) | C12—C11B | 1.480 (2) |
| S—C1 | 1.764 (3) | C12—C11A | 1.481 (2) |
| S—C15 | 1.788 (4) | C12—H12A | 0.9900 |
| O1—C8 | 1.366 (4) | C12—H12B | 0.9900 |
| O1—C7 | 1.376 (4) | C12—H12C | 0.9900 |
| O2—C10 | 1.317 (5) | C12—H12D | 0.9900 |
| O2—C11A | 1.459 (7) | C13—C14B | 1.4797 (15) |
| O2—C11B | 1.59 (3) | C13—C14A | 1.481 (2) |
| O3A—O3B | 0.590 (16) | C13—H13A | 0.9900 |
| O3A—C10 | 1.205 (5) | C13—H13B | 0.9900 |
| O3B—C10 | 1.205 (5) | C13—H13C | 0.9900 |
| C1—C8 | 1.339 (4) | C13—H13D | 0.9900 |
| C1—C2 | 1.444 (4) | C11A—H11A | 0.9900 |
| C2—C7 | 1.383 (4) | C11A—H11B | 0.9900 |
| C2—C3 | 1.395 (4) | C14A—H14A | 0.9800 |
| C3—C4 | 1.377 (5) | C14A—H14B | 0.9800 |
| C3—H3 | 0.9500 | C14A—H14C | 0.9800 |
| C4—C5 | 1.392 (5) | C11B—H11C | 0.9900 |
| C5—C6 | 1.364 (6) | C11B—H11D | 0.9900 |
| C5—H5 | 0.9500 | C14B—H14D | 0.9800 |
| C6—C7 | 1.384 (5) | C14B—H14E | 0.9800 |
| C6—H6 | 0.9500 | C14B—H14F | 0.9800 |
| C8—C9 | 1.486 (5) | C15—H15A | 0.9800 |
| C9—C10 | 1.505 (5) | C15—H15B | 0.9800 |
| C9—H9A | 0.9900 | C15—H15C | 0.9800 |
| C4—I—O4i | 52.14 (10) | C11B—C12—H12C | 113.6 |
| O4—S—C1 | 107.46 (15) | C11A—C12—H12C | 91.8 |
| O4—S—C15 | 107.26 (19) | H12B—C12—H12C | 117.5 |
| C1—S—C15 | 98.03 (17) | C13—C12—H12D | 113.3 |
| C8—O1—C7 | 106.0 (2) | C11B—C12—H12D | 113.4 |
| C10—O2—C11A | 119.1 (4) | C11A—C12—H12D | 107.1 |
| C10—O2—C11B | 109.9 (4) | H12A—C12—H12D | 100.9 |
| O3B—O3A—C10 | 75.8 (4) | H12C—C12—H12D | 110.7 |
| O3A—O3B—C10 | 75.8 (4) | C12—C13—C14B | 149.8 (19) |
| C8—C1—C2 | 107.4 (3) | C12—C13—C14A | 105.6 (10) |
| C8—C1—S | 123.5 (3) | C12—C13—H13A | 110.6 |
| C2—C1—S | 129.1 (2) | C14B—C13—H13A | 90.2 |
| C7—C2—C3 | 119.5 (3) | C14A—C13—H13A | 110.6 |
| C7—C2—C1 | 104.4 (3) | C12—C13—H13B | 110.6 |
| C3—C2—C1 | 136.0 (3) | C14B—C13—H13B | 81.2 |
| C4—C3—C2 | 117.1 (3) | C14A—C13—H13B | 110.6 |
| C4—C3—H3 | 121.5 | H13A—C13—H13B | 108.8 |
| C2—C3—H3 | 121.5 | C12—C13—H13C | 99.6 |
| C3—C4—C5 | 122.3 (3) | C14B—C13—H13C | 99.4 |
| C3—C4—I | 118.3 (2) | C14A—C13—H13C | 112.8 |
| C5—C4—I | 119.4 (3) | H13B—C13—H13C | 116.6 |
| C6—C5—C4 | 121.1 (4) | C12—C13—H13D | 99.6 |
| C6—C5—H5 | 119.4 | C14B—C13—H13D | 98.4 |
| C4—C5—H5 | 119.4 | C14A—C13—H13D | 130.3 |
| C5—C6—C7 | 116.6 (3) | H13A—C13—H13D | 99.0 |
| C5—C6—H6 | 121.7 | H13C—C13—H13D | 104.1 |
| C7—C6—H6 | 121.7 | O2—C11A—C12 | 106.9 (5) |
| O1—C7—C2 | 110.8 (3) | O2—C11A—H11A | 110.3 |
| O1—C7—C6 | 125.8 (3) | C12—C11A—H11A | 110.3 |
| C2—C7—C6 | 123.4 (3) | O2—C11A—H11B | 110.3 |
| C1—C8—O1 | 111.4 (3) | C12—C11A—H11B | 110.3 |
| C1—C8—C9 | 133.4 (3) | H11A—C11A—H11B | 108.6 |
| O1—C8—C9 | 115.2 (3) | C13—C14A—H14A | 109.5 |
| C8—C9—C10 | 112.4 (3) | C13—C14A—H14B | 109.5 |
| C8—C9—H9A | 109.1 | C13—C14A—H14C | 109.5 |
| C10—C9—H9A | 109.1 | C12—C11B—O2 | 100.4 (12) |
| C8—C9—H9B | 109.1 | C12—C11B—H11C | 111.7 |
| C10—C9—H9B | 109.1 | O2—C11B—H11C | 111.7 |
| H9A—C9—H9B | 107.9 | C12—C11B—H11D | 111.7 |
| O3A—C10—O2 | 126.3 (7) | O2—C11B—H11D | 111.7 |
| O3B—C10—O2 | 120.6 (9) | H11C—C11B—H11D | 109.5 |
| O3A—C10—C9 | 120.6 (8) | C13—C14B—H14D | 109.5 |
| O3B—C10—C9 | 126.7 (9) | C13—C14B—H14E | 109.5 |
| O2—C10—C9 | 110.5 (3) | H14D—C14B—H14E | 109.5 |
| C13—C12—C11B | 91.3 (16) | C13—C14B—H14F | 109.5 |
| C13—C12—C11A | 118.6 (8) | H14D—C14B—H14F | 109.5 |
| C13—C12—H12A | 107.7 | H14E—C14B—H14F | 109.5 |
| C11B—C12—H12A | 130.0 | S—C15—H15A | 109.5 |
| C11A—C12—H12A | 107.7 | S—C15—H15B | 109.5 |
| C13—C12—H12B | 107.7 | H15A—C15—H15B | 109.5 |
| C11B—C12—H12B | 110.4 | S—C15—H15C | 109.5 |
| C11A—C12—H12B | 107.7 | H15A—C15—H15C | 109.5 |
| H12A—C12—H12B | 107.1 | H15B—C15—H15C | 109.5 |
| C13—C12—H12C | 113.4 | ||
| O4—S—C1—C8 | 135.5 (3) | C7—O1—C8—C1 | 0.9 (4) |
| C15—S—C1—C8 | −113.5 (3) | C7—O1—C8—C9 | 178.5 (3) |
| O4—S—C1—C2 | −41.2 (3) | C1—C8—C9—C10 | 96.8 (5) |
| C15—S—C1—C2 | 69.8 (3) | O1—C8—C9—C10 | −80.1 (4) |
| C8—C1—C2—C7 | 0.7 (3) | O3B—O3A—C10—O2 | −88 (3) |
| S—C1—C2—C7 | 177.8 (3) | O3B—O3A—C10—C9 | 112 (3) |
| C8—C1—C2—C3 | 179.9 (4) | O3A—O3B—C10—O2 | 111 (3) |
| S—C1—C2—C3 | −3.0 (5) | O3A—O3B—C10—C9 | −87 (3) |
| C7—C2—C3—C4 | −0.5 (4) | C11A—O2—C10—O3A | 10.1 (16) |
| C1—C2—C3—C4 | −179.6 (3) | C11B—O2—C10—O3A | 39 (2) |
| C2—C3—C4—C5 | 0.5 (5) | C11A—O2—C10—O3B | −23.3 (17) |
| C2—C3—C4—I | −178.0 (2) | C11B—O2—C10—O3B | 6(2) |
| O4i—I—C4—C3 | 55.4 (2) | C11A—O2—C10—C9 | 172.1 (6) |
| O4i—I—C4—C5 | −123.1 (4) | C11B—O2—C10—C9 | −159.0 (14) |
| C3—C4—C5—C6 | 0.1 (6) | C8—C9—C10—O3A | −36.2 (13) |
| I—C4—C5—C6 | 178.6 (3) | C8—C9—C10—O3B | −2.8 (18) |
| C4—C5—C6—C7 | −0.7 (6) | C8—C9—C10—O2 | 160.6 (4) |
| C8—O1—C7—C2 | −0.4 (4) | C11B—C12—C13—C14B | −158 (4) |
| C8—O1—C7—C6 | −179.7 (3) | C11A—C12—C13—C14B | −168 (3) |
| C3—C2—C7—O1 | −179.6 (3) | C11B—C12—C13—C14A | −168.6 (12) |
| C1—C2—C7—O1 | −0.2 (3) | C11A—C12—C13—C14A | −179.2 (8) |
| C3—C2—C7—C6 | −0.2 (5) | C10—O2—C11A—C12 | 150.7 (6) |
| C1—C2—C7—C6 | 179.1 (3) | C11B—O2—C11A—C12 | 73.5 (9) |
| C5—C6—C7—O1 | −180.0 (3) | C13—C12—C11A—O2 | −59.2 (10) |
| C5—C6—C7—C2 | 0.8 (6) | C11B—C12—C11A—O2 | −81 (2) |
| C2—C1—C8—O1 | −1.0 (4) | C13—C12—C11B—O2 | −98.9 (16) |
| S—C1—C8—O1 | −178.3 (2) | C11A—C12—C11B—O2 | 62 (2) |
| C2—C1—C8—C9 | −178.0 (3) | C10—O2—C11B—C12 | 176.1 (12) |
| S—C1—C8—C9 | 4.6 (5) | C11A—O2—C11B—C12 | −69.0 (8) |
| H··· | ||||
| C15—H15B···Cgii | 0.98 | 2.97 | 3.722 (4) | 134 |
| C5—H5···O4iii | 0.95 | 2.46 | 3.370 (4) | 160 |
| C9—H9B···O4iv | 0.99 | 2.50 | 3.376 (4) | 147 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C15—H15 | 0.98 | 2.97 | 3.722 (4) | 134 |
| C5—H5⋯O4ii | 0.95 | 2.46 | 3.370 (4) | 160 |
| C9—H9 | 0.99 | 2.50 | 3.376 (4) | 147 |
Symmetry codes: (i) ; (ii) ; (iii) . Cg is the centroid of the C2–C7 benzene ring.