| Literature DB >> 21580774 |
Tanveer Ahmad, Muhammad Zia-Ur-Rehman, Hamid Latif Siddiqui, Shahid Mahmud, Masood Parvez.
Abstract
In the title moleclue, C(13)H(10)N(4)O(3), the methyl-idene-hydrazide [-C(=O)-N-N=C-] fragment is essentially planar, with a maximum deviation of 0.0228 (7) Å. The mean planes of the benzene and pyridine rings make dihedral angles of 25.44 (6) and 5.47 (7)°, respectively, with the mean plane of the methyl-idene-hydrazide fragment. In the crystal structure, inter-molecular N-H⋯N hydrogen bonds link mol-ecules into chains along the b axis. Additional stabilization is provided by weak inter-molecular C-H⋯O hydrogen bonds. The O atoms of the nitro group are disordered over two sets of sites of equal occupancy.Entities:
Year: 2010 PMID: 21580774 PMCID: PMC2983976 DOI: 10.1107/S1600536810011244
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H10N4O3 | |
| Monoclinic, | Melting point: 547 K |
| Hall symbol: -P 2ybc | Cu |
| Cell parameters from 10114 reflections | |
| θ = 3.0–68.0° | |
| µ = 0.91 mm−1 | |
| β = 100.609 (1)° | |
| Plate, yellow | |
| 0.20 × 0.16 × 0.05 mm |
| Bruker APEXII diffractometer | 2192 independent reflections |
| Radiation source: fine-focus sealed tube | 2098 reflections with |
| graphite | |
| ω and φ scans | θmax = 68.0°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 10114 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H-atom parameters constrained | |
| 2192 reflections | (Δ/σ)max = 0.001 |
| 190 parameters | Δρmax = 0.26 e Å−3 |
| 66 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| N1 | −0.0353 (11) | 0.277 (2) | 0.3850 (9) | 0.0354 (16) | 0.50 |
| O1 | −0.086 (3) | 0.336 (5) | 0.295 (3) | 0.059 (3) | 0.50 |
| O2 | −0.0552 (6) | 0.1587 (11) | 0.4450 (5) | 0.0550 (12) | 0.50 |
| N1' | −0.0292 (11) | 0.259 (2) | 0.4237 (9) | 0.0354 (16) | 0.50 |
| O1' | −0.082 (3) | 0.311 (5) | 0.321 (3) | 0.059 (3) | 0.50 |
| O2' | −0.0525 (6) | 0.1572 (11) | 0.4997 (5) | 0.0550 (12) | 0.50 |
| O3 | 0.36776 (6) | 0.53420 (11) | 0.67517 (8) | 0.0267 (2) | |
| N2 | 0.37145 (6) | 0.60961 (12) | 0.46461 (9) | 0.0179 (2) | |
| H2N | 0.3442 | 0.6031 | 0.3817 | 0.022* | |
| N3 | 0.45517 (6) | 0.69107 (12) | 0.49965 (9) | 0.0183 (2) | |
| N4 | 0.66815 (7) | 1.02086 (12) | 0.31200 (10) | 0.0203 (2) | |
| C1 | 0.23641 (8) | 0.46958 (15) | 0.51171 (12) | 0.0203 (3) | |
| C2 | 0.17661 (9) | 0.52595 (17) | 0.40038 (13) | 0.0261 (3) | |
| H2 | 0.1965 | 0.6096 | 0.3484 | 0.031* | |
| C3 | 0.08809 (9) | 0.46038 (19) | 0.36515 (14) | 0.0329 (3) | |
| H3 | 0.0466 | 0.4988 | 0.2898 | 0.040* | |
| C4 | 0.06168 (9) | 0.33806 (18) | 0.44215 (16) | 0.0352 (4) | |
| C5 | 0.11925 (10) | 0.27997 (17) | 0.55309 (16) | 0.0361 (4) | |
| H5 | 0.0992 | 0.1953 | 0.6040 | 0.043* | |
| C6 | 0.20687 (9) | 0.34797 (16) | 0.58836 (14) | 0.0280 (3) | |
| H6 | 0.2472 | 0.3114 | 0.6655 | 0.034* | |
| C7 | 0.33183 (8) | 0.54003 (14) | 0.55923 (11) | 0.0189 (3) | |
| C8 | 0.48376 (8) | 0.75796 (14) | 0.40288 (11) | 0.0182 (3) | |
| H8 | 0.4490 | 0.7430 | 0.3168 | 0.022* | |
| C9 | 0.56840 (8) | 0.85680 (14) | 0.42110 (11) | 0.0179 (3) | |
| C10 | 0.59341 (8) | 0.92553 (15) | 0.30967 (11) | 0.0191 (3) | |
| H10 | 0.5552 | 0.9035 | 0.2270 | 0.023* | |
| C11 | 0.72083 (8) | 1.05187 (15) | 0.42965 (12) | 0.0212 (3) | |
| H11 | 0.7744 | 1.1186 | 0.4334 | 0.025* | |
| C12 | 0.70067 (8) | 0.99095 (15) | 0.54626 (12) | 0.0219 (3) | |
| H12 | 0.7395 | 1.0168 | 0.6277 | 0.026* | |
| C13 | 0.62364 (8) | 0.89241 (15) | 0.54267 (11) | 0.0201 (3) | |
| H13 | 0.6085 | 0.8497 | 0.6213 | 0.024* |
| N1 | 0.0219 (18) | 0.035 (3) | 0.051 (5) | −0.0047 (17) | 0.010 (4) | −0.013 (4) |
| O1 | 0.027 (3) | 0.086 (9) | 0.059 (8) | −0.015 (4) | −0.004 (5) | −0.022 (6) |
| O2 | 0.0311 (8) | 0.0435 (8) | 0.093 (4) | −0.0147 (6) | 0.018 (3) | 0.007 (3) |
| N1' | 0.0219 (18) | 0.035 (3) | 0.051 (5) | −0.0047 (17) | 0.010 (4) | −0.013 (4) |
| O1' | 0.027 (3) | 0.086 (9) | 0.059 (8) | −0.015 (4) | −0.004 (5) | −0.022 (6) |
| O2' | 0.0311 (8) | 0.0435 (8) | 0.093 (4) | −0.0147 (6) | 0.018 (3) | 0.007 (3) |
| O3 | 0.0277 (5) | 0.0329 (5) | 0.0186 (4) | −0.0062 (4) | 0.0022 (3) | 0.0030 (4) |
| N2 | 0.0158 (5) | 0.0208 (5) | 0.0168 (5) | −0.0024 (4) | 0.0021 (4) | −0.0006 (4) |
| N3 | 0.0156 (5) | 0.0187 (5) | 0.0205 (5) | −0.0013 (4) | 0.0030 (4) | −0.0014 (4) |
| N4 | 0.0184 (5) | 0.0215 (5) | 0.0215 (5) | 0.0005 (4) | 0.0053 (4) | 0.0010 (4) |
| C1 | 0.0192 (6) | 0.0194 (6) | 0.0240 (6) | −0.0001 (4) | 0.0080 (5) | −0.0052 (5) |
| C2 | 0.0207 (6) | 0.0318 (7) | 0.0263 (6) | −0.0023 (5) | 0.0058 (5) | −0.0034 (5) |
| C3 | 0.0207 (6) | 0.0429 (8) | 0.0345 (7) | −0.0011 (6) | 0.0032 (5) | −0.0121 (6) |
| C4 | 0.0184 (6) | 0.0315 (7) | 0.0579 (9) | −0.0057 (5) | 0.0130 (6) | −0.0211 (7) |
| C5 | 0.0293 (7) | 0.0217 (7) | 0.0631 (10) | −0.0037 (5) | 0.0234 (7) | −0.0006 (7) |
| C6 | 0.0252 (6) | 0.0227 (6) | 0.0387 (7) | 0.0003 (5) | 0.0126 (5) | 0.0015 (6) |
| C7 | 0.0197 (6) | 0.0167 (6) | 0.0206 (6) | 0.0005 (4) | 0.0045 (4) | −0.0013 (5) |
| C8 | 0.0178 (5) | 0.0181 (6) | 0.0182 (5) | 0.0010 (4) | 0.0021 (4) | −0.0005 (4) |
| C9 | 0.0170 (6) | 0.0163 (6) | 0.0206 (6) | 0.0023 (4) | 0.0040 (4) | −0.0012 (4) |
| C10 | 0.0180 (6) | 0.0196 (6) | 0.0193 (6) | 0.0012 (4) | 0.0024 (4) | −0.0013 (5) |
| C11 | 0.0161 (5) | 0.0207 (6) | 0.0271 (6) | −0.0016 (4) | 0.0045 (5) | −0.0013 (5) |
| C12 | 0.0198 (6) | 0.0235 (6) | 0.0212 (6) | −0.0003 (5) | 0.0008 (5) | −0.0029 (5) |
| C13 | 0.0208 (6) | 0.0210 (6) | 0.0191 (6) | 0.0016 (5) | 0.0050 (5) | 0.0004 (5) |
| N1—O1 | 1.19 (3) | C2—H2 | 0.9500 |
| N1—O2 | 1.213 (16) | C3—C4 | 1.380 (2) |
| N1—C4 | 1.518 (16) | C3—H3 | 0.9500 |
| N1'—O2' | 1.236 (15) | C4—C5 | 1.379 (2) |
| N1'—O1' | 1.27 (2) | C5—C6 | 1.383 (2) |
| N1'—C4 | 1.460 (17) | C5—H5 | 0.9500 |
| O3—C7 | 1.2205 (15) | C6—H6 | 0.9500 |
| N2—C7 | 1.3532 (15) | C8—C9 | 1.4617 (16) |
| N2—N3 | 1.3826 (13) | C8—H8 | 0.9500 |
| N2—H2N | 0.8800 | C9—C10 | 1.3929 (16) |
| N3—C8 | 1.2788 (15) | C9—C13 | 1.3964 (16) |
| N4—C10 | 1.3397 (16) | C10—H10 | 0.9500 |
| N4—C11 | 1.3411 (16) | C11—C12 | 1.3886 (17) |
| C1—C6 | 1.3919 (18) | C11—H11 | 0.9500 |
| C1—C2 | 1.3920 (18) | C12—C13 | 1.3806 (17) |
| C1—C7 | 1.5061 (16) | C12—H12 | 0.9500 |
| C2—C3 | 1.3865 (18) | C13—H13 | 0.9500 |
| O1—N1—O2 | 124 (2) | C4—C5—H5 | 120.8 |
| O1—N1—C4 | 125 (2) | C6—C5—H5 | 120.8 |
| O2—N1—C4 | 111.0 (8) | C5—C6—C1 | 120.48 (13) |
| O2'—N1'—O1' | 125 (2) | C5—C6—H6 | 119.8 |
| O2'—N1'—C4 | 124.5 (9) | C1—C6—H6 | 119.8 |
| O1'—N1'—C4 | 111 (2) | O3—C7—N2 | 124.48 (11) |
| C7—N2—N3 | 119.29 (9) | O3—C7—C1 | 120.77 (11) |
| C7—N2—H2N | 120.4 | N2—C7—C1 | 114.75 (10) |
| N3—N2—H2N | 120.4 | N3—C8—C9 | 121.82 (10) |
| C8—N3—N2 | 113.72 (9) | N3—C8—H8 | 119.1 |
| C10—N4—C11 | 117.17 (10) | C9—C8—H8 | 119.1 |
| C6—C1—C2 | 119.84 (12) | C10—C9—C13 | 117.86 (11) |
| C6—C1—C7 | 116.99 (11) | C10—C9—C8 | 117.52 (10) |
| C2—C1—C7 | 123.10 (11) | C13—C9—C8 | 124.57 (11) |
| C3—C2—C1 | 120.18 (13) | N4—C10—C9 | 123.95 (11) |
| C3—C2—H2 | 119.9 | N4—C10—H10 | 118.0 |
| C1—C2—H2 | 119.9 | C9—C10—H10 | 118.0 |
| C4—C3—C2 | 118.43 (14) | N4—C11—C12 | 123.02 (11) |
| C4—C3—H3 | 120.8 | N4—C11—H11 | 118.5 |
| C2—C3—H3 | 120.8 | C12—C11—H11 | 118.5 |
| C5—C4—C3 | 122.72 (12) | C13—C12—C11 | 119.31 (11) |
| C5—C4—N1' | 110.9 (4) | C13—C12—H12 | 120.3 |
| C3—C4—N1' | 126.3 (4) | C11—C12—H12 | 120.3 |
| C5—C4—N1 | 126.4 (4) | C12—C13—C9 | 118.67 (11) |
| C3—C4—N1 | 110.8 (4) | C12—C13—H13 | 120.7 |
| C4—C5—C6 | 118.33 (13) | C9—C13—H13 | 120.7 |
| C7—N2—N3—C8 | −177.02 (10) | N1—C4—C5—C6 | 178.1 (7) |
| C6—C1—C2—C3 | −0.52 (19) | C4—C5—C6—C1 | −1.3 (2) |
| C7—C1—C2—C3 | −177.23 (11) | C2—C1—C6—C5 | 1.50 (19) |
| C1—C2—C3—C4 | −0.57 (19) | C7—C1—C6—C5 | 178.40 (11) |
| C2—C3—C4—C5 | 0.7 (2) | N3—N2—C7—O3 | −5.01 (17) |
| C2—C3—C4—N1' | 177.6 (8) | N3—N2—C7—C1 | 174.08 (9) |
| C2—C3—C4—N1 | −177.4 (6) | C6—C1—C7—O3 | −23.95 (17) |
| O2'—N1'—C4—C5 | 2.3 (16) | C2—C1—C7—O3 | 152.85 (12) |
| O1'—N1'—C4—C5 | −180 (2) | C6—C1—C7—N2 | 156.92 (11) |
| O2'—N1'—C4—C3 | −174.9 (10) | C2—C1—C7—N2 | −26.28 (17) |
| O1'—N1'—C4—C3 | 3(3) | N2—N3—C8—C9 | 176.74 (10) |
| O2'—N1'—C4—N1 | 168 (6) | N3—C8—C9—C10 | −179.54 (11) |
| O1'—N1'—C4—N1 | −14 (4) | N3—C8—C9—C13 | −2.28 (18) |
| O1—N1—C4—C5 | 174 (3) | C11—N4—C10—C9 | −0.60 (17) |
| O2—N1—C4—C5 | −4.7 (15) | C13—C9—C10—N4 | 1.38 (18) |
| O1—N1—C4—C3 | −8(3) | C8—C9—C10—N4 | 178.82 (10) |
| O2—N1—C4—C3 | 173.3 (9) | C10—N4—C11—C12 | −0.44 (17) |
| O1—N1—C4—N1' | 158 (7) | N4—C11—C12—C13 | 0.65 (18) |
| O2—N1—C4—N1' | −21 (4) | C11—C12—C13—C9 | 0.17 (18) |
| C3—C4—C5—C6 | 0.2 (2) | C10—C9—C13—C12 | −1.11 (17) |
| N1'—C4—C5—C6 | −177.1 (7) | C8—C9—C13—C12 | −178.35 (11) |
| H··· | ||||
| N2—H2N···N4i | 0.88 | 2.09 | 2.9108 (14) | 154 |
| C3—H3···O1 | 0.95 | 2.37 | 2.72 (4) | 101 |
| C5—H5···O2' | 0.95 | 2.30 | 2.666 (8) | 102 |
| C8—H8···O3ii | 0.95 | 2.50 | 3.1423 (14) | 125 |
| C11—H11···O2iii | 0.95 | 2.49 | 3.364 (8) | 152 |
| C11—H11···O2'iii | 0.95 | 2.52 | 3.371 (8) | 150 |
| C13—H13···O3iv | 0.95 | 2.57 | 3.1279 (14) | 118 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.88 | 2.09 | 2.9108 (14) | 154 |
| C8—H8⋯O3ii | 0.95 | 2.50 | 3.1423 (14) | 125 |
| C11—H11⋯O2iii | 0.95 | 2.49 | 3.364 (8) | 152 |
| C11—H11⋯O2′iii | 0.95 | 2.52 | 3.371 (8) | 150 |
| C13—H13⋯O3iv | 0.95 | 2.57 | 3.1279 (14) | 118 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .