Literature DB >> 21583712

(E)-N'-(3,4-Dihydroxy-benzyl-idene)-4-nitro-benzohydrazide.

Feng Qiu1, Xiao-Jing He, Ya-Xin Sun, Xu Zhu.   

Abstract

In the title Schiff base compound, C(14)n class="Species">H(11)N(3)O(5), the dihedral angle between the two benzene rings is 1.6 (1)°. The mol-ecule displays an E configuration about the C=N bond. An intra-molecular O-H⋯O hydrogen bond is observed. In the crystal, mol-ecules are linked into layers parallel to (101) by O-H⋯O, N-H⋯O and C-H⋯O hydrogen bonds. One of the hydroxyl groups is disordered over two positions, with occupancies of 0.643 (5) and 0.357 (5).

Entities:  

Year:  2009        PMID: 21583712      PMCID: PMC2977219          DOI: 10.1107/S1600536809029705

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of Schiff base compounds, see: Kucukguzel et al. (2006 ▶); Khattab (2005 ▶); Karthikeyan et al. (2006 ▶); Okabe et al. (1993 ▶). For bond-length data, see: Allen et al. (1987 ▶). For related structures, see: Shan et al. (2008 ▶); Fun et al. (2008 ▶); Yang (2008 ▶); Ma et al. (2008 ▶); Diao et al. (2008a ▶,b ▶); Ejsmont et al. (2008 ▶); Qiu & Zhao (2008 ▶).

Experimental

Crystal data

C14H11N3O5 M = 301.26 Monoclinic, a = 7.666 (1) Å b = 13.196 (2) Å c = 13.176 (2) Å β = 95.361 (3)° V = 1327.1 (3) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 298 K 0.20 × 0.20 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.977, T max = 0.979 8322 measured reflections 3204 independent reflections 1364 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.161 S = 1.02 3204 reflections 210 parameters 2 restraints H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.23 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809029705/ci2865sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809029705/ci2865Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H11N3O5F(000) = 624
Mr = 301.26Dx = 1.508 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1038 reflections
a = 7.666 (1) Åθ = 2.5–24.5°
b = 13.196 (2) ŵ = 0.12 mm1
c = 13.176 (2) ÅT = 298 K
β = 95.361 (3)°Block, colourless
V = 1327.1 (3) Å30.20 × 0.20 × 0.18 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3204 independent reflections
Radiation source: fine-focus sealed tube1364 reflections with I > 2σ(I)
graphiteRint = 0.056
ω scansθmax = 28.3°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −10→10
Tmin = 0.977, Tmax = 0.979k = −16→17
8322 measured reflectionsl = −17→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.161H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0491P)2 + 0.4176P] where P = (Fo2 + 2Fc2)/3
3204 reflections(Δ/σ)max = 0.001
210 parametersΔρmax = 0.17 e Å3
2 restraintsΔρmin = −0.23 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.6818 (3)1.15446 (15)0.09056 (17)0.0606 (6)
O20.5123 (3)0.56081 (15)0.27427 (16)0.0661 (7)
H2A0.45200.58250.31770.099*
O30.6235 (5)0.5128 (2)0.0971 (3)0.0814 (15)0.643 (5)
H3A0.60130.47820.14600.122*0.643 (5)
O41.0449 (3)1.43595 (18)−0.3087 (2)0.0749 (7)
O50.9668 (4)1.5401 (2)−0.1968 (2)0.1037 (10)
N10.9797 (4)1.4543 (2)−0.2301 (2)0.0648 (8)
N20.7625 (3)1.03529 (18)−0.01803 (18)0.0508 (7)
H2B0.78951.0090−0.07780.061*
N30.7082 (3)0.9614 (2)0.04686 (19)0.0524 (7)
C10.9174 (4)1.3697 (2)−0.1705 (2)0.0513 (8)
C20.8561 (4)1.3914 (2)−0.0783 (3)0.0601 (9)
H20.85171.4579−0.05520.072*
C30.8013 (4)1.3123 (2)−0.0209 (2)0.0572 (9)
H30.75991.32550.04190.069*
C40.8072 (4)1.2134 (2)−0.0558 (2)0.0438 (7)
C50.8690 (4)1.1948 (2)−0.1500 (2)0.0521 (8)
H50.87231.1288−0.17450.063*
C60.9252 (4)1.2736 (2)−0.2070 (2)0.0558 (9)
H60.96791.2613−0.26960.067*
C70.7446 (4)1.1325 (2)0.0104 (2)0.0475 (8)
C80.7224 (4)0.8695 (2)0.0199 (2)0.0501 (8)
H80.76550.8536−0.04180.060*
C90.6702 (4)0.7893 (2)0.0869 (2)0.0468 (8)
C100.6126 (4)0.8135 (2)0.1810 (2)0.0522 (9)
H100.60940.88110.20080.063*
C110.5601 (4)0.7403 (2)0.2447 (2)0.0544 (9)
H110.52320.75820.30760.065*0.643 (5)
C120.5617 (4)0.6395 (2)0.2157 (2)0.0480 (8)
C130.6193 (4)0.6140 (2)0.1230 (2)0.0532 (8)
H130.62240.54640.10340.064*0.357 (5)
C140.6724 (4)0.6884 (2)0.0591 (2)0.0522 (9)
H140.71030.6705−0.00340.063*
O3'0.5167 (10)0.7811 (5)0.3302 (5)0.076 (3)0.357 (5)
H3'0.42250.75790.34390.115*0.357 (5)
U11U22U33U12U13U23
O10.0805 (16)0.0506 (14)0.0549 (14)0.0031 (12)0.0283 (12)−0.0007 (11)
O20.0902 (17)0.0484 (14)0.0645 (15)0.0031 (12)0.0320 (13)0.0033 (11)
O30.140 (4)0.037 (2)0.073 (3)0.005 (2)0.046 (2)−0.0088 (18)
O40.0773 (17)0.0780 (18)0.0740 (18)−0.0035 (14)0.0315 (14)0.0168 (14)
O50.155 (3)0.0525 (17)0.111 (2)−0.0188 (18)0.056 (2)0.0086 (16)
N10.072 (2)0.052 (2)0.072 (2)−0.0078 (16)0.0208 (17)0.0113 (17)
N20.0662 (18)0.0403 (16)0.0484 (16)−0.0003 (13)0.0187 (14)−0.0016 (13)
N30.0616 (17)0.0433 (16)0.0541 (16)−0.0017 (13)0.0149 (14)0.0068 (13)
C10.052 (2)0.051 (2)0.053 (2)0.0002 (16)0.0145 (17)0.0112 (16)
C20.072 (2)0.043 (2)0.068 (2)0.0001 (17)0.022 (2)−0.0005 (18)
C30.067 (2)0.051 (2)0.056 (2)0.0041 (18)0.0228 (18)−0.0038 (17)
C40.0455 (18)0.0404 (19)0.0466 (19)0.0010 (14)0.0104 (15)0.0028 (15)
C50.066 (2)0.0407 (19)0.053 (2)0.0041 (16)0.0205 (17)0.0017 (15)
C60.062 (2)0.056 (2)0.052 (2)0.0038 (17)0.0179 (17)0.0021 (17)
C70.0461 (19)0.049 (2)0.048 (2)0.0023 (15)0.0087 (16)−0.0006 (16)
C80.054 (2)0.047 (2)0.051 (2)0.0012 (16)0.0123 (16)0.0010 (16)
C90.0479 (19)0.0414 (19)0.052 (2)−0.0001 (15)0.0093 (16)0.0005 (16)
C100.064 (2)0.0330 (18)0.062 (2)−0.0018 (15)0.0148 (18)−0.0035 (15)
C110.066 (2)0.047 (2)0.052 (2)0.0009 (17)0.0120 (18)−0.0043 (17)
C120.056 (2)0.0382 (19)0.052 (2)−0.0007 (15)0.0152 (17)0.0068 (15)
C130.062 (2)0.0387 (19)0.060 (2)0.0011 (16)0.0156 (18)−0.0049 (17)
C140.057 (2)0.050 (2)0.052 (2)0.0006 (16)0.0160 (17)−0.0035 (16)
O3'0.116 (7)0.066 (5)0.053 (4)−0.018 (4)0.040 (4)−0.011 (3)
O1—C71.236 (3)C4—C71.487 (4)
O2—C121.367 (3)C5—C61.375 (4)
O2—H2A0.82C5—H50.93
O3—C131.379 (4)C6—H60.93
O3—H3A0.82C8—C91.458 (4)
O4—N11.216 (3)C8—H80.93
O5—N11.221 (3)C9—C141.382 (4)
N1—C11.469 (4)C9—C101.390 (4)
N2—C71.346 (4)C10—C111.365 (4)
N2—N31.386 (3)C10—H100.93
N2—H2B0.90C11—O3'1.319 (5)
N3—C81.271 (3)C11—C121.385 (4)
C1—C61.360 (4)C11—H110.93
C1—C21.373 (4)C12—C131.380 (4)
C2—C31.377 (4)C13—C141.379 (4)
C2—H20.93C13—H130.93
C3—C41.387 (4)C14—H140.93
C3—H30.93O3'—H3'0.82
C4—C51.390 (4)
C12—O2—H2A109.5O1—C7—C4120.4 (3)
C13—O3—H3A109.5N2—C7—C4118.3 (3)
O4—N1—O5123.0 (3)N3—C8—C9119.2 (3)
O4—N1—C1118.9 (3)N3—C8—H8120.4
O5—N1—C1118.1 (3)C9—C8—H8120.4
C7—N2—N3117.0 (2)C14—C9—C10118.1 (3)
C7—N2—H2B130.3C14—C9—C8121.8 (3)
N3—N2—H2B112.0C10—C9—C8120.1 (3)
C8—N3—N2117.4 (3)C11—C10—C9121.5 (3)
C6—C1—C2122.4 (3)C11—C10—H10119.2
C6—C1—N1119.5 (3)C9—C10—H10119.2
C2—C1—N1118.0 (3)O3'—C11—C10110.5 (4)
C1—C2—C3118.4 (3)O3'—C11—C12129.6 (4)
C1—C2—H2120.8C10—C11—C12119.9 (3)
C3—C2—H2120.8C10—C11—H11120.0
C2—C3—C4120.7 (3)C12—C11—H11120.0
C2—C3—H3119.7O2—C12—C13116.3 (3)
C4—C3—H3119.7O2—C12—C11124.3 (3)
C3—C4—C5119.1 (3)C13—C12—C11119.4 (3)
C3—C4—C7117.4 (3)C14—C13—O3121.6 (3)
C5—C4—C7123.5 (3)C14—C13—C12120.3 (3)
C6—C5—C4120.3 (3)O3—C13—C12118.1 (3)
C6—C5—H5119.9C14—C13—H13119.8
C4—C5—H5119.9C12—C13—H13119.8
C1—C6—C5119.1 (3)C13—C14—C9120.8 (3)
C1—C6—H6120.4C13—C14—H14119.6
C5—C6—H6120.4C9—C14—H14119.5
O1—C7—N2121.3 (3)C11—O3'—H3'109.5
C7—N2—N3—C8179.0 (3)C5—C4—C7—N25.9 (4)
O4—N1—C1—C6−3.5 (5)N2—N3—C8—C9178.7 (3)
O5—N1—C1—C6178.1 (3)N3—C8—C9—C14176.0 (3)
O4—N1—C1—C2175.3 (3)N3—C8—C9—C10−2.7 (5)
O5—N1—C1—C2−3.1 (5)C14—C9—C10—C110.2 (5)
C6—C1—C2—C30.2 (5)C8—C9—C10—C11178.9 (3)
N1—C1—C2—C3−178.5 (3)C9—C10—C11—O3'178.0 (4)
C1—C2—C3—C4−0.3 (5)C9—C10—C11—C12−0.7 (5)
C2—C3—C4—C5−0.2 (5)O3'—C11—C12—O21.3 (7)
C2—C3—C4—C7−179.6 (3)C10—C11—C12—O2179.7 (3)
C3—C4—C5—C60.7 (5)O3'—C11—C12—C13−177.4 (5)
C7—C4—C5—C6−179.8 (3)C10—C11—C12—C131.1 (5)
C2—C1—C6—C50.3 (5)O2—C12—C13—C14−179.8 (3)
N1—C1—C6—C5179.1 (3)C11—C12—C13—C14−1.0 (5)
C4—C5—C6—C1−0.8 (5)O2—C12—C13—O3−0.3 (5)
N3—N2—C7—O1−0.3 (4)C11—C12—C13—O3178.5 (3)
N3—N2—C7—C4178.0 (2)O3—C13—C14—C9−178.9 (3)
C3—C4—C7—O13.6 (4)C12—C13—C14—C90.5 (5)
C5—C4—C7—O1−175.8 (3)C10—C9—C14—C13−0.1 (5)
C3—C4—C7—N2−174.6 (3)C8—C9—C14—C13−178.8 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O20.822.172.636 (4)116
O2—H2A···O1i0.821.912.722 (3)171
O3'—H3'···O1i0.821.842.548 (7)144
N2—H2B···O4ii0.902.263.121 (3)158
C5—H5···O5ii0.932.483.210 (4)135
C10—H10···O2iii0.932.583.467 (3)159
C11—H11···O1i0.932.563.192 (4)126
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O20.822.172.636 (4)116
O2—H2A⋯O1i0.821.912.722 (3)171
O3′—H3′⋯O1i0.821.842.548 (7)144
N2—H2B⋯O4ii0.902.263.121 (3)158
C5—H5⋯O5ii0.932.483.210 (4)135
C10—H10⋯O2iii0.932.583.467 (3)159
C11—H11⋯O1i0.932.563.192 (4)126

Symmetry codes: (i) ; (ii) ; (iii) .

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9.  N'-[(E)-1-Phenyl-ethyl-idene]benzo-hydrazide.

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2.  4-Nitro-N'-[(E)-3-pyridylmethyl-idene]benzohydrazide.

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