Literature DB >> 21580709

N'-(2-Hydr-oxy-4-methoxy-benzyl-idene)isonicotinohydrazide.

Feng Zhi1, Rong Wang.   

Abstract

The title compound, C(14)H(13)N(3)O(3), was synthesized by the condensation reaction of 2-hydr-oxy-4-methoxy-benzaldehyde with isonicotinohydrazide in a methanol solution. The mol-ecule of the compound displays a trans configuration with respect to the C=N and C-N bonds. The dihedral angle between the benzene and the pyridine rings is 27.3 (2)°. In the crystal, mol-ecules are linked by N-H⋯N inter-actions into zigzag chains with graph-set notation C(7) along [010]. An intra-molecular O-H⋯N hydrogen bond is observed.

Entities:  

Year:  2010        PMID: 21580709      PMCID: PMC2984034          DOI: 10.1107/S1600536810010020

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For Schiff base compounds, see: Fan et al. (2007 ▶); Kim et al. (2005 ▶); Nimitsiriwat et al. (2004 ▶). For their biological activity, see: Chen et al. (1997 ▶); Ren et al. (2002 ▶). For related structures, see: Mohd Lair et al. (2009 ▶); Fun et al. (2008 ▶); Yang (2008 ▶); Zhi (2008 ▶, 2009 ▶); Zhi & Yang (2007 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C14H13N3O3 M = 271.27 Monoclinic, a = 8.4704 (11) Å b = 10.6866 (15) Å c = 14.848 (2) Å β = 104.929 (5)° V = 1298.7 (3) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.17 × 0.15 × 0.15 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.983, T max = 0.985 7591 measured reflections 2814 independent reflections 2148 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.107 S = 1.05 2814 reflections 186 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810010020/bx2271sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810010020/bx2271Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H13N3O3F(000) = 568
Mr = 271.27Dx = 1.387 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 8.4704 (11) ÅCell parameters from 2534 reflections
b = 10.6866 (15) Åθ = 2.4–29.9°
c = 14.848 (2) ŵ = 0.10 mm1
β = 104.929 (5)°T = 298 K
V = 1298.7 (3) Å3Block, colourless
Z = 40.17 × 0.15 × 0.15 mm
Bruker SMART 1000 CCD area-detector diffractometer2814 independent reflections
Radiation source: fine-focus sealed tube2148 reflections with I > 2σ(I)
graphiteRint = 0.021
ω scansθmax = 27.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→10
Tmin = 0.983, Tmax = 0.985k = −11→13
7591 measured reflectionsl = −18→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0491P)2 + 0.2097P] where P = (Fo2 + 2Fc2)/3
2814 reflections(Δ/σ)max < 0.001
186 parametersΔρmax = 0.15 e Å3
1 restraintΔρmin = −0.17 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.10385 (14)0.87232 (11)0.12848 (8)0.0425 (3)
N20.01859 (14)0.78408 (11)0.16392 (8)0.0422 (3)
N3−0.26459 (16)0.40486 (11)0.24523 (9)0.0491 (3)
O10.28189 (15)0.93517 (9)0.01927 (8)0.0554 (3)
H10.22840.88810.04360.083*
O20.12526 (15)0.62775 (10)0.09488 (9)0.0624 (3)
O30.40498 (14)1.36738 (9)0.00218 (8)0.0550 (3)
C10.17894 (16)1.08276 (12)0.11284 (10)0.0404 (3)
C20.26792 (16)1.05413 (12)0.04800 (9)0.0386 (3)
C30.34625 (17)1.14692 (12)0.01077 (10)0.0410 (3)
H30.40721.1263−0.03100.049*
C40.33345 (17)1.27035 (12)0.03599 (10)0.0421 (3)
C50.24469 (19)1.30187 (14)0.09935 (12)0.0518 (4)
H50.23561.38500.11590.062*
C60.17066 (19)1.20882 (14)0.13711 (11)0.0512 (4)
H60.11291.23010.18030.061*
C70.09706 (17)0.98671 (13)0.15257 (10)0.0446 (3)
H70.03931.00820.19580.054*
C80.03539 (16)0.66264 (13)0.14180 (9)0.0410 (3)
C9−0.06727 (16)0.57305 (12)0.17959 (9)0.0365 (3)
C10−0.12509 (18)0.46540 (13)0.13050 (10)0.0437 (3)
H10−0.09900.44720.07480.052*
C11−0.22227 (19)0.38542 (14)0.16569 (11)0.0493 (4)
H11−0.26070.31350.13190.059*
C12−0.20463 (18)0.50811 (13)0.29267 (10)0.0454 (3)
H12−0.23040.52310.34890.054*
C13−0.10710 (17)0.59344 (12)0.26321 (9)0.0395 (3)
H13−0.06840.66380.29890.047*
C140.4899 (2)1.34231 (15)−0.06713 (12)0.0585 (4)
H14A0.58171.2890−0.04150.088*
H14B0.52761.4196−0.08730.088*
H14C0.41771.3015−0.11930.088*
H2−0.0540 (19)0.8096 (18)0.1945 (12)0.080*
U11U22U33U12U13U23
N10.0453 (7)0.0384 (6)0.0492 (7)−0.0015 (5)0.0219 (5)0.0052 (5)
N20.0459 (7)0.0376 (6)0.0506 (7)−0.0014 (5)0.0261 (5)0.0030 (5)
N30.0577 (8)0.0419 (7)0.0544 (7)−0.0031 (6)0.0266 (6)0.0045 (6)
O10.0798 (8)0.0316 (5)0.0704 (7)−0.0041 (5)0.0477 (6)−0.0036 (5)
O20.0732 (7)0.0502 (6)0.0831 (8)−0.0044 (5)0.0549 (7)−0.0083 (6)
O30.0653 (7)0.0335 (5)0.0721 (7)−0.0032 (5)0.0281 (6)0.0067 (5)
C10.0385 (7)0.0357 (7)0.0496 (8)0.0020 (6)0.0161 (6)0.0012 (6)
C20.0426 (7)0.0323 (7)0.0424 (7)0.0012 (5)0.0135 (6)0.0006 (6)
C30.0459 (7)0.0371 (7)0.0429 (7)0.0003 (6)0.0167 (6)0.0019 (6)
C40.0420 (7)0.0330 (7)0.0497 (8)0.0006 (6)0.0091 (6)0.0053 (6)
C50.0568 (9)0.0310 (7)0.0722 (10)0.0026 (6)0.0247 (8)−0.0039 (7)
C60.0523 (9)0.0426 (8)0.0665 (10)0.0040 (6)0.0294 (8)−0.0051 (7)
C70.0439 (8)0.0442 (8)0.0516 (8)0.0013 (6)0.0230 (7)0.0001 (6)
C80.0429 (7)0.0412 (8)0.0436 (7)0.0006 (6)0.0198 (6)0.0002 (6)
C90.0361 (7)0.0347 (7)0.0416 (7)0.0045 (5)0.0155 (6)0.0028 (5)
C100.0521 (8)0.0404 (7)0.0445 (8)0.0008 (6)0.0231 (7)−0.0031 (6)
C110.0574 (9)0.0406 (8)0.0541 (9)−0.0066 (7)0.0217 (7)−0.0048 (7)
C120.0557 (9)0.0456 (8)0.0408 (8)0.0036 (7)0.0231 (7)0.0041 (6)
C130.0461 (8)0.0366 (7)0.0380 (7)0.0019 (6)0.0148 (6)−0.0003 (6)
C140.0664 (10)0.0444 (9)0.0713 (11)−0.0039 (7)0.0301 (9)0.0107 (8)
N1—C71.2791 (18)C4—C51.388 (2)
N1—N21.3724 (15)C5—C61.370 (2)
N2—C81.3552 (18)C5—H50.9300
N2—H20.896 (9)C6—H60.9300
N3—C111.3358 (19)C7—H70.9300
N3—C121.3369 (19)C8—C91.4963 (18)
O1—C21.3558 (16)C9—C101.3823 (19)
O1—H10.8200C9—C131.3852 (18)
O2—C81.2153 (16)C10—C111.379 (2)
O3—C41.3606 (16)C10—H100.9300
O3—C141.4247 (19)C11—H110.9300
C1—C61.401 (2)C12—C131.3753 (19)
C1—C21.4009 (19)C12—H120.9300
C1—C71.4468 (19)C13—H130.9300
C2—C31.3849 (19)C14—H14A0.9600
C3—C41.3831 (19)C14—H14B0.9600
C3—H30.9300C14—H14C0.9600
C7—N1—N2118.91 (12)N1—C7—H7119.9
C8—N2—N1117.81 (11)C1—C7—H7119.9
C8—N2—H2122.9 (13)O2—C8—N2123.59 (13)
N1—N2—H2118.9 (13)O2—C8—C9121.93 (13)
C11—N3—C12116.24 (12)N2—C8—C9114.48 (11)
C2—O1—H1109.5C10—C9—C13117.94 (12)
C4—O3—C14118.62 (11)C10—C9—C8119.73 (12)
C6—C1—C2117.28 (13)C13—C9—C8122.33 (12)
C6—C1—C7121.09 (13)C11—C10—C9118.74 (13)
C2—C1—C7121.63 (12)C11—C10—H10120.6
O1—C2—C3117.14 (12)C9—C10—H10120.6
O1—C2—C1121.81 (12)N3—C11—C10124.11 (14)
C3—C2—C1121.05 (12)N3—C11—H11117.9
C4—C3—C2119.72 (13)C10—C11—H11117.9
C4—C3—H3120.1N3—C12—C13123.88 (13)
C2—C3—H3120.1N3—C12—H12118.1
O3—C4—C3123.60 (13)C13—C12—H12118.1
O3—C4—C5115.81 (12)C12—C13—C9119.06 (13)
C3—C4—C5120.58 (13)C12—C13—H13120.5
C6—C5—C4119.07 (13)C9—C13—H13120.5
C6—C5—H5120.5O3—C14—H14A109.5
C4—C5—H5120.5O3—C14—H14B109.5
C5—C6—C1122.28 (14)H14A—C14—H14B109.5
C5—C6—H6118.9O3—C14—H14C109.5
C1—C6—H6118.9H14A—C14—H14C109.5
N1—C7—C1120.22 (13)H14B—C14—H14C109.5
D—H···AD—HH···AD···AD—H···A
N2—H2···N3i0.90 (1)2.22 (1)3.1000 (17)169 (2)
O1—H1···N10.821.852.5720 (15)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯N3i0.90 (1)2.22 (1)3.1000 (17)169 (2)
O1—H1⋯N10.821.852.5720 (15)146

Symmetry code: (i) .

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Authors:  Feng Zhi
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Authors:  Nooraziah Mohd Lair; Hapipah Mohd Ali; Seik Weng Ng
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8.  [Not Available].

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Journal:  BioDrugs       Date:  1997-03       Impact factor: 5.807

9.  N'-(2-Chloro-5-nitro-benzyl-idene)isonicotinohydrazide.

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10.  4-Chloro-N'-[(Z)-4-nitro-benzyl-idene]benzohydrazide monohydrate.

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