| Literature DB >> 21580701 |
Hadariah Bahron, Siti Najihah Abu Bakar, Karimah Kassim, Chin Sing Yeap, Hoong-Kun Fun.
Abstract
The title Schiff base compound, C(14)H(12)BrClN(2)O, exists in an E configuration with respect to the central C=N double bond. The amino group adopts a pyramidal configuration. The dihedral angle between the two benzene rings is 76.88 (10)° and an intra-molecular O-H⋯N hydrogen bond forms a six-membered ring, generating an S(6) ring motif. In the crystal structure, mol-ecules are linked into chains along [010] via N-H⋯O hydrogen bonds. The presence of π-π inter-actions [centroid-centroid distance = 3.6244 (12) Å] further stabilizes the crystal structure.Entities:
Year: 2010 PMID: 21580701 PMCID: PMC2983940 DOI: 10.1107/S1600536810009773
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H12BrClN2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4343 reflections |
| θ = 2.7–28.5° | |
| µ = 3.24 mm−1 | |
| β = 107.065 (1)° | Block, yellow |
| 0.24 × 0.22 × 0.11 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 3925 independent reflections |
| Radiation source: fine-focus sealed tube | 2420 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.1°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 14782 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3925 reflections | (Δ/σ)max = 0.001 |
| 185 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.82408 (3) | 0.92283 (3) | 0.233924 (15) | 0.05982 (11) | |
| Cl1 | 0.55171 (6) | 1.10458 (7) | 0.92352 (4) | 0.05352 (17) | |
| O1 | 0.92270 (16) | 1.31628 (18) | 0.55948 (10) | 0.0499 (4) | |
| N1 | 0.76555 (17) | 1.1434 (2) | 0.61354 (10) | 0.0391 (4) | |
| N2 | 0.7688 (2) | 0.9064 (2) | 0.89348 (14) | 0.0503 (5) | |
| C1 | 0.9012 (2) | 1.2211 (2) | 0.48934 (12) | 0.0361 (5) | |
| C2 | 0.9613 (2) | 1.2577 (3) | 0.42328 (13) | 0.0415 (5) | |
| H2A | 1.0168 | 1.3435 | 0.4298 | 0.050* | |
| C3 | 0.9398 (2) | 1.1686 (3) | 0.34850 (13) | 0.0411 (5) | |
| H3A | 0.9795 | 1.1944 | 0.3043 | 0.049* | |
| C4 | 0.8588 (2) | 1.0407 (2) | 0.33972 (12) | 0.0376 (5) | |
| C5 | 0.7997 (2) | 1.0004 (2) | 0.40428 (13) | 0.0377 (5) | |
| H5A | 0.7462 | 0.9130 | 0.3971 | 0.045* | |
| C6 | 0.81908 (19) | 1.0898 (2) | 0.48087 (12) | 0.0325 (4) | |
| C7 | 0.75211 (19) | 1.0490 (2) | 0.54920 (13) | 0.0341 (5) | |
| C8 | 0.7052 (2) | 1.1213 (2) | 0.68396 (12) | 0.0349 (5) | |
| C9 | 0.7605 (2) | 1.0181 (2) | 0.75146 (13) | 0.0361 (5) | |
| H9A | 0.8302 | 0.9534 | 0.7471 | 0.043* | |
| C10 | 0.71348 (19) | 1.0095 (2) | 0.82588 (12) | 0.0343 (5) | |
| C11 | 0.6078 (2) | 1.1068 (2) | 0.82884 (13) | 0.0353 (5) | |
| C12 | 0.5507 (2) | 1.2078 (3) | 0.76140 (14) | 0.0457 (5) | |
| H12A | 0.4790 | 1.2703 | 0.7648 | 0.055* | |
| C13 | 0.6000 (2) | 1.2166 (3) | 0.68838 (14) | 0.0442 (5) | |
| H13A | 0.5626 | 1.2857 | 0.6429 | 0.053* | |
| C14 | 0.6714 (2) | 0.9042 (2) | 0.53932 (15) | 0.0497 (6) | |
| H14A | 0.6292 | 0.8973 | 0.5862 | 0.075* | |
| H14B | 0.7311 | 0.8186 | 0.5426 | 0.075* | |
| H14C | 0.6022 | 0.9040 | 0.4828 | 0.075* | |
| H1O1 | 0.875 (3) | 1.280 (3) | 0.5918 (17) | 0.090 (10)* | |
| H1N2 | 0.845 (3) | 0.875 (3) | 0.8945 (15) | 0.056 (8)* | |
| H2N2 | 0.760 (3) | 0.933 (3) | 0.9416 (18) | 0.068 (9)* |
| Br1 | 0.0789 (2) | 0.0630 (2) | 0.04600 (15) | 0.00123 (13) | 0.03142 (13) | −0.01291 (12) |
| Cl1 | 0.0612 (4) | 0.0630 (4) | 0.0472 (3) | 0.0015 (3) | 0.0328 (3) | −0.0020 (3) |
| O1 | 0.0632 (10) | 0.0497 (10) | 0.0423 (9) | −0.0224 (8) | 0.0241 (8) | −0.0097 (7) |
| N1 | 0.0511 (11) | 0.0378 (10) | 0.0321 (9) | −0.0088 (8) | 0.0180 (8) | −0.0014 (8) |
| N2 | 0.0585 (14) | 0.0534 (14) | 0.0435 (12) | 0.0162 (11) | 0.0222 (11) | 0.0160 (10) |
| C1 | 0.0383 (11) | 0.0381 (13) | 0.0314 (10) | −0.0005 (9) | 0.0095 (9) | 0.0032 (9) |
| C2 | 0.0408 (12) | 0.0428 (13) | 0.0425 (12) | −0.0045 (10) | 0.0149 (10) | 0.0046 (10) |
| C3 | 0.0418 (12) | 0.0469 (14) | 0.0400 (11) | 0.0060 (11) | 0.0206 (10) | 0.0106 (10) |
| C4 | 0.0426 (11) | 0.0396 (13) | 0.0320 (10) | 0.0090 (10) | 0.0131 (9) | 0.0022 (9) |
| C5 | 0.0435 (12) | 0.0327 (12) | 0.0391 (11) | 0.0000 (10) | 0.0157 (10) | 0.0005 (9) |
| C6 | 0.0348 (10) | 0.0327 (12) | 0.0306 (10) | 0.0014 (9) | 0.0106 (8) | 0.0037 (9) |
| C7 | 0.0378 (11) | 0.0323 (12) | 0.0328 (10) | −0.0004 (9) | 0.0113 (9) | 0.0033 (9) |
| C8 | 0.0420 (11) | 0.0335 (12) | 0.0303 (10) | −0.0072 (9) | 0.0123 (9) | −0.0034 (9) |
| C9 | 0.0398 (11) | 0.0340 (12) | 0.0381 (11) | 0.0030 (9) | 0.0169 (9) | −0.0008 (9) |
| C10 | 0.0388 (11) | 0.0318 (12) | 0.0317 (10) | −0.0037 (9) | 0.0094 (9) | 0.0002 (9) |
| C11 | 0.0401 (11) | 0.0370 (12) | 0.0329 (10) | −0.0029 (9) | 0.0173 (9) | −0.0036 (9) |
| C12 | 0.0457 (12) | 0.0461 (14) | 0.0489 (13) | 0.0087 (11) | 0.0195 (11) | 0.0025 (11) |
| C13 | 0.0499 (13) | 0.0445 (14) | 0.0377 (11) | 0.0061 (11) | 0.0121 (10) | 0.0082 (10) |
| C14 | 0.0631 (15) | 0.0461 (15) | 0.0480 (13) | −0.0175 (11) | 0.0288 (11) | −0.0101 (11) |
| Br1—C4 | 1.900 (2) | C5—C6 | 1.401 (3) |
| Cl1—C11 | 1.7458 (18) | C5—H5A | 0.9300 |
| O1—C1 | 1.348 (2) | C6—C7 | 1.478 (2) |
| O1—H1O1 | 0.86 (3) | C7—C14 | 1.498 (3) |
| N1—C7 | 1.282 (2) | C8—C13 | 1.382 (3) |
| N1—C8 | 1.431 (2) | C8—C9 | 1.383 (3) |
| N2—C10 | 1.384 (3) | C9—C10 | 1.392 (2) |
| N2—H1N2 | 0.82 (3) | C9—H9A | 0.9300 |
| N2—H2N2 | 0.82 (3) | C10—C11 | 1.390 (3) |
| C1—C2 | 1.392 (3) | C11—C12 | 1.373 (3) |
| C1—C6 | 1.409 (3) | C12—C13 | 1.385 (3) |
| C2—C3 | 1.374 (3) | C12—H12A | 0.9300 |
| C2—H2A | 0.9300 | C13—H13A | 0.9300 |
| C3—C4 | 1.378 (3) | C14—H14A | 0.9600 |
| C3—H3A | 0.9300 | C14—H14B | 0.9600 |
| C4—C5 | 1.372 (3) | C14—H14C | 0.9600 |
| C1—O1—H1O1 | 105.6 (19) | C6—C7—C14 | 119.31 (17) |
| C7—N1—C8 | 123.50 (17) | C13—C8—C9 | 120.47 (17) |
| C10—N2—H1N2 | 114.0 (17) | C13—C8—N1 | 118.56 (18) |
| C10—N2—H2N2 | 112.9 (18) | C9—C8—N1 | 120.61 (18) |
| H1N2—N2—H2N2 | 116 (2) | C8—C9—C10 | 120.98 (18) |
| O1—C1—C2 | 117.72 (19) | C8—C9—H9A | 119.5 |
| O1—C1—C6 | 122.22 (17) | C10—C9—H9A | 119.5 |
| C2—C1—C6 | 120.05 (19) | N2—C10—C11 | 121.52 (18) |
| C3—C2—C1 | 120.8 (2) | N2—C10—C9 | 121.06 (19) |
| C3—C2—H2A | 119.6 | C11—C10—C9 | 117.42 (18) |
| C1—C2—H2A | 119.6 | C12—C11—C10 | 121.97 (17) |
| C2—C3—C4 | 119.29 (18) | C12—C11—Cl1 | 119.54 (15) |
| C2—C3—H3A | 120.4 | C10—C11—Cl1 | 118.44 (15) |
| C4—C3—H3A | 120.4 | C11—C12—C13 | 119.95 (19) |
| C5—C4—C3 | 121.26 (19) | C11—C12—H12A | 120.0 |
| C5—C4—Br1 | 119.84 (16) | C13—C12—H12A | 120.0 |
| C3—C4—Br1 | 118.87 (14) | C8—C13—C12 | 119.2 (2) |
| C4—C5—C6 | 120.66 (19) | C8—C13—H13A | 120.4 |
| C4—C5—H5A | 119.7 | C12—C13—H13A | 120.4 |
| C6—C5—H5A | 119.7 | C7—C14—H14A | 109.5 |
| C5—C6—C1 | 117.94 (17) | C7—C14—H14B | 109.5 |
| C5—C6—C7 | 120.68 (18) | H14A—C14—H14B | 109.5 |
| C1—C6—C7 | 121.36 (17) | C7—C14—H14C | 109.5 |
| N1—C7—C6 | 116.84 (17) | H14A—C14—H14C | 109.5 |
| N1—C7—C14 | 123.84 (17) | H14B—C14—H14C | 109.5 |
| O1—C1—C2—C3 | −177.75 (18) | C5—C6—C7—C14 | 4.6 (3) |
| C6—C1—C2—C3 | 1.2 (3) | C1—C6—C7—C14 | −177.06 (19) |
| C1—C2—C3—C4 | −0.8 (3) | C7—N1—C8—C13 | −110.9 (2) |
| C2—C3—C4—C5 | −0.2 (3) | C7—N1—C8—C9 | 76.0 (3) |
| C2—C3—C4—Br1 | 177.57 (15) | C13—C8—C9—C10 | −1.2 (3) |
| C3—C4—C5—C6 | 0.6 (3) | N1—C8—C9—C10 | 171.82 (18) |
| Br1—C4—C5—C6 | −177.08 (14) | C8—C9—C10—N2 | −180.0 (2) |
| C4—C5—C6—C1 | −0.2 (3) | C8—C9—C10—C11 | 1.0 (3) |
| C4—C5—C6—C7 | 178.20 (18) | N2—C10—C11—C12 | −178.9 (2) |
| O1—C1—C6—C5 | 178.19 (18) | C9—C10—C11—C12 | 0.2 (3) |
| C2—C1—C6—C5 | −0.7 (3) | N2—C10—C11—Cl1 | 3.7 (3) |
| O1—C1—C6—C7 | −0.2 (3) | C9—C10—C11—Cl1 | −177.24 (15) |
| C2—C1—C6—C7 | −179.09 (18) | C10—C11—C12—C13 | −1.1 (3) |
| C8—N1—C7—C6 | 179.02 (17) | Cl1—C11—C12—C13 | 176.27 (17) |
| C8—N1—C7—C14 | 0.2 (3) | C9—C8—C13—C12 | 0.2 (3) |
| C5—C6—C7—N1 | −174.25 (18) | N1—C8—C13—C12 | −172.91 (19) |
| C1—C6—C7—N1 | 4.1 (3) | C11—C12—C13—C8 | 0.9 (3) |
| H··· | ||||
| O1—H1O1···N1 | 0.86 (3) | 1.74 (3) | 2.533 (2) | 151 (3) |
| N2—H1N2···O1i | 0.82 (3) | 2.33 (3) | 3.129 (3) | 163 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.86 (3) | 1.74 (3) | 2.533 (2) | 151 (3) |
| N2—H1 | 0.82 (3) | 2.33 (3) | 3.129 (3) | 163 (2) |
Symmetry code: (i) .