Literature DB >> 21580701

(E)-2-[1-(3-Amino-4-chloro-phenyl-imino)eth-yl]-4-bromo-phenol.

Hadariah Bahron, Siti Najihah Abu Bakar, Karimah Kassim, Chin Sing Yeap, Hoong-Kun Fun.   

Abstract

The title Schiff base compound, C(14)H(12)BrClN(2)O, exists in an E configuration with respect to the central C=N double bond. The amino group adopts a pyramidal configuration. The dihedral angle between the two benzene rings is 76.88 (10)° and an intra-molecular O-H⋯N hydrogen bond forms a six-membered ring, generating an S(6) ring motif. In the crystal structure, mol-ecules are linked into chains along [010] via N-H⋯O hydrogen bonds. The presence of π-π inter-actions [centroid-centroid distance = 3.6244 (12) Å] further stabilizes the crystal structure.

Entities:  

Year:  2010        PMID: 21580701      PMCID: PMC2983940          DOI: 10.1107/S1600536810009773

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity and corrosion inhibition properties of Schiff base derivatives, see: Azam et al. (2007 ▶); Sauri et al. (2009 ▶). For a related structure, see: Yamin et al. (2009 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C14H12BrClN2O M = 339.62 Monoclinic, a = 10.2469 (1) Å b = 8.7672 (1) Å c = 15.7180 (2) Å β = 107.065 (1)° V = 1349.88 (3) Å3 Z = 4 Mo Kα radiation μ = 3.24 mm−1 T = 296 K 0.24 × 0.22 × 0.11 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.509, T max = 0.726 14782 measured reflections 3925 independent reflections 2420 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.077 S = 1.00 3925 reflections 185 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810009773/tk2641sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810009773/tk2641Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12BrClN2OF(000) = 680
Mr = 339.62Dx = 1.671 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4343 reflections
a = 10.2469 (1) Åθ = 2.7–28.5°
b = 8.7672 (1) ŵ = 3.24 mm1
c = 15.7180 (2) ÅT = 296 K
β = 107.065 (1)°Block, yellow
V = 1349.88 (3) Å30.24 × 0.22 × 0.11 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer3925 independent reflections
Radiation source: fine-focus sealed tube2420 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 30.1°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −14→14
Tmin = 0.509, Tmax = 0.726k = −12→9
14782 measured reflectionsl = −22→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.077H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.0299P)2 + 0.2742P] where P = (Fo2 + 2Fc2)/3
3925 reflections(Δ/σ)max = 0.001
185 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.82408 (3)0.92283 (3)0.233924 (15)0.05982 (11)
Cl10.55171 (6)1.10458 (7)0.92352 (4)0.05352 (17)
O10.92270 (16)1.31628 (18)0.55948 (10)0.0499 (4)
N10.76555 (17)1.1434 (2)0.61354 (10)0.0391 (4)
N20.7688 (2)0.9064 (2)0.89348 (14)0.0503 (5)
C10.9012 (2)1.2211 (2)0.48934 (12)0.0361 (5)
C20.9613 (2)1.2577 (3)0.42328 (13)0.0415 (5)
H2A1.01681.34350.42980.050*
C30.9398 (2)1.1686 (3)0.34850 (13)0.0411 (5)
H3A0.97951.19440.30430.049*
C40.8588 (2)1.0407 (2)0.33972 (12)0.0376 (5)
C50.7997 (2)1.0004 (2)0.40428 (13)0.0377 (5)
H5A0.74620.91300.39710.045*
C60.81908 (19)1.0898 (2)0.48087 (12)0.0325 (4)
C70.75211 (19)1.0490 (2)0.54920 (13)0.0341 (5)
C80.7052 (2)1.1213 (2)0.68396 (12)0.0349 (5)
C90.7605 (2)1.0181 (2)0.75146 (13)0.0361 (5)
H9A0.83020.95340.74710.043*
C100.71348 (19)1.0095 (2)0.82588 (12)0.0343 (5)
C110.6078 (2)1.1068 (2)0.82884 (13)0.0353 (5)
C120.5507 (2)1.2078 (3)0.76140 (14)0.0457 (5)
H12A0.47901.27030.76480.055*
C130.6000 (2)1.2166 (3)0.68838 (14)0.0442 (5)
H13A0.56261.28570.64290.053*
C140.6714 (2)0.9042 (2)0.53932 (15)0.0497 (6)
H14A0.62920.89730.58620.075*
H14B0.73110.81860.54260.075*
H14C0.60220.90400.48280.075*
H1O10.875 (3)1.280 (3)0.5918 (17)0.090 (10)*
H1N20.845 (3)0.875 (3)0.8945 (15)0.056 (8)*
H2N20.760 (3)0.933 (3)0.9416 (18)0.068 (9)*
U11U22U33U12U13U23
Br10.0789 (2)0.0630 (2)0.04600 (15)0.00123 (13)0.03142 (13)−0.01291 (12)
Cl10.0612 (4)0.0630 (4)0.0472 (3)0.0015 (3)0.0328 (3)−0.0020 (3)
O10.0632 (10)0.0497 (10)0.0423 (9)−0.0224 (8)0.0241 (8)−0.0097 (7)
N10.0511 (11)0.0378 (10)0.0321 (9)−0.0088 (8)0.0180 (8)−0.0014 (8)
N20.0585 (14)0.0534 (14)0.0435 (12)0.0162 (11)0.0222 (11)0.0160 (10)
C10.0383 (11)0.0381 (13)0.0314 (10)−0.0005 (9)0.0095 (9)0.0032 (9)
C20.0408 (12)0.0428 (13)0.0425 (12)−0.0045 (10)0.0149 (10)0.0046 (10)
C30.0418 (12)0.0469 (14)0.0400 (11)0.0060 (11)0.0206 (10)0.0106 (10)
C40.0426 (11)0.0396 (13)0.0320 (10)0.0090 (10)0.0131 (9)0.0022 (9)
C50.0435 (12)0.0327 (12)0.0391 (11)0.0000 (10)0.0157 (10)0.0005 (9)
C60.0348 (10)0.0327 (12)0.0306 (10)0.0014 (9)0.0106 (8)0.0037 (9)
C70.0378 (11)0.0323 (12)0.0328 (10)−0.0004 (9)0.0113 (9)0.0033 (9)
C80.0420 (11)0.0335 (12)0.0303 (10)−0.0072 (9)0.0123 (9)−0.0034 (9)
C90.0398 (11)0.0340 (12)0.0381 (11)0.0030 (9)0.0169 (9)−0.0008 (9)
C100.0388 (11)0.0318 (12)0.0317 (10)−0.0037 (9)0.0094 (9)0.0002 (9)
C110.0401 (11)0.0370 (12)0.0329 (10)−0.0029 (9)0.0173 (9)−0.0036 (9)
C120.0457 (12)0.0461 (14)0.0489 (13)0.0087 (11)0.0195 (11)0.0025 (11)
C130.0499 (13)0.0445 (14)0.0377 (11)0.0061 (11)0.0121 (10)0.0082 (10)
C140.0631 (15)0.0461 (15)0.0480 (13)−0.0175 (11)0.0288 (11)−0.0101 (11)
Br1—C41.900 (2)C5—C61.401 (3)
Cl1—C111.7458 (18)C5—H5A0.9300
O1—C11.348 (2)C6—C71.478 (2)
O1—H1O10.86 (3)C7—C141.498 (3)
N1—C71.282 (2)C8—C131.382 (3)
N1—C81.431 (2)C8—C91.383 (3)
N2—C101.384 (3)C9—C101.392 (2)
N2—H1N20.82 (3)C9—H9A0.9300
N2—H2N20.82 (3)C10—C111.390 (3)
C1—C21.392 (3)C11—C121.373 (3)
C1—C61.409 (3)C12—C131.385 (3)
C2—C31.374 (3)C12—H12A0.9300
C2—H2A0.9300C13—H13A0.9300
C3—C41.378 (3)C14—H14A0.9600
C3—H3A0.9300C14—H14B0.9600
C4—C51.372 (3)C14—H14C0.9600
C1—O1—H1O1105.6 (19)C6—C7—C14119.31 (17)
C7—N1—C8123.50 (17)C13—C8—C9120.47 (17)
C10—N2—H1N2114.0 (17)C13—C8—N1118.56 (18)
C10—N2—H2N2112.9 (18)C9—C8—N1120.61 (18)
H1N2—N2—H2N2116 (2)C8—C9—C10120.98 (18)
O1—C1—C2117.72 (19)C8—C9—H9A119.5
O1—C1—C6122.22 (17)C10—C9—H9A119.5
C2—C1—C6120.05 (19)N2—C10—C11121.52 (18)
C3—C2—C1120.8 (2)N2—C10—C9121.06 (19)
C3—C2—H2A119.6C11—C10—C9117.42 (18)
C1—C2—H2A119.6C12—C11—C10121.97 (17)
C2—C3—C4119.29 (18)C12—C11—Cl1119.54 (15)
C2—C3—H3A120.4C10—C11—Cl1118.44 (15)
C4—C3—H3A120.4C11—C12—C13119.95 (19)
C5—C4—C3121.26 (19)C11—C12—H12A120.0
C5—C4—Br1119.84 (16)C13—C12—H12A120.0
C3—C4—Br1118.87 (14)C8—C13—C12119.2 (2)
C4—C5—C6120.66 (19)C8—C13—H13A120.4
C4—C5—H5A119.7C12—C13—H13A120.4
C6—C5—H5A119.7C7—C14—H14A109.5
C5—C6—C1117.94 (17)C7—C14—H14B109.5
C5—C6—C7120.68 (18)H14A—C14—H14B109.5
C1—C6—C7121.36 (17)C7—C14—H14C109.5
N1—C7—C6116.84 (17)H14A—C14—H14C109.5
N1—C7—C14123.84 (17)H14B—C14—H14C109.5
O1—C1—C2—C3−177.75 (18)C5—C6—C7—C144.6 (3)
C6—C1—C2—C31.2 (3)C1—C6—C7—C14−177.06 (19)
C1—C2—C3—C4−0.8 (3)C7—N1—C8—C13−110.9 (2)
C2—C3—C4—C5−0.2 (3)C7—N1—C8—C976.0 (3)
C2—C3—C4—Br1177.57 (15)C13—C8—C9—C10−1.2 (3)
C3—C4—C5—C60.6 (3)N1—C8—C9—C10171.82 (18)
Br1—C4—C5—C6−177.08 (14)C8—C9—C10—N2−180.0 (2)
C4—C5—C6—C1−0.2 (3)C8—C9—C10—C111.0 (3)
C4—C5—C6—C7178.20 (18)N2—C10—C11—C12−178.9 (2)
O1—C1—C6—C5178.19 (18)C9—C10—C11—C120.2 (3)
C2—C1—C6—C5−0.7 (3)N2—C10—C11—Cl13.7 (3)
O1—C1—C6—C7−0.2 (3)C9—C10—C11—Cl1−177.24 (15)
C2—C1—C6—C7−179.09 (18)C10—C11—C12—C13−1.1 (3)
C8—N1—C7—C6179.02 (17)Cl1—C11—C12—C13176.27 (17)
C8—N1—C7—C140.2 (3)C9—C8—C13—C120.2 (3)
C5—C6—C7—N1−174.25 (18)N1—C8—C13—C12−172.91 (19)
C1—C6—C7—N14.1 (3)C11—C12—C13—C80.9 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1O1···N10.86 (3)1.74 (3)2.533 (2)151 (3)
N2—H1N2···O1i0.82 (3)2.33 (3)3.129 (3)163 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O1⋯N10.86 (3)1.74 (3)2.533 (2)151 (3)
N2—H1N2⋯O1i0.82 (3)2.33 (3)3.129 (3)163 (2)

Symmetry code: (i) .

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4.  Structure validation in chemical crystallography.

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  4 in total
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1.  2-[(2-Hy-droxy-4-meth-oxy-benzyl-idene)aza-nium-yl]benzoate monohydrate.

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2.  2-[(E)-(2,4-Dihy-droxy-benzyl-idene)aza-nium-yl]-3-phenyl-propano-ate.

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