| Literature DB >> 21580671 |
Aisyah Saad Abdul Rahim, Shafida Abd Hamid, Shivanagere Nagojappa Narendra Babu, Wan-Sin Loh, Hoong-Kun Fun.
Abstract
In the title compound, C(11)H(14)N(2)O(5), the mol-ecular structure is stabilized by an intra-molecular N-H⋯O hydrogen bond, which generates an S(6) ring motif. The nitro group is twisted slightly from the attached benzene ring, forming a dihedral angle of 5.2 (2)°. In the crystal packing, inter-molecular O-H⋯O and C-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network. The crystal studied was a non-merohedral twin, the refined ratio of the twin components being 0.264 (2):0.736 (2).Entities:
Year: 2010 PMID: 21580671 PMCID: PMC2983846 DOI: 10.1107/S1600536810008147
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H14N2O5 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1880 reflections |
| θ = 2.4–28.1° | |
| µ = 0.12 mm−1 | |
| β = 99.607 (2)° | Needle, yellow |
| 0.43 × 0.13 × 0.03 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 2587 independent reflections |
| Radiation source: fine-focus sealed tube | 2026 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 8457 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2587 reflections | (Δ/σ)max < 0.001 |
| 173 parameters | Δρmax = 0.50 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.38669 (15) | 0.04338 (11) | 1.1300 (3) | 0.0285 (4) | |
| O2 | 0.57298 (13) | 0.09227 (10) | 1.2508 (2) | 0.0193 (4) | |
| O3 | 0.04479 (14) | 0.22764 (10) | 0.8325 (2) | 0.0194 (4) | |
| O4 | 0.07343 (13) | 0.37665 (10) | 0.8413 (2) | 0.0170 (4) | |
| O5 | 0.82105 (15) | 0.33071 (11) | 1.0883 (2) | 0.0192 (4) | |
| N1 | 0.46108 (17) | 0.10564 (12) | 1.1729 (3) | 0.0157 (4) | |
| N2 | 0.61527 (17) | 0.26565 (12) | 1.2825 (3) | 0.0147 (4) | |
| C1 | 0.29266 (19) | 0.20462 (14) | 1.0362 (3) | 0.0141 (5) | |
| H1A | 0.2445 | 0.1539 | 0.9998 | 0.017* | |
| C2 | 0.4166 (2) | 0.19539 (14) | 1.1327 (3) | 0.0135 (4) | |
| C3 | 0.49466 (19) | 0.27115 (14) | 1.1919 (3) | 0.0135 (4) | |
| C4 | 0.43542 (19) | 0.35571 (14) | 1.1508 (3) | 0.0148 (5) | |
| H4A | 0.4811 | 0.4071 | 1.1901 | 0.018* | |
| C5 | 0.3135 (2) | 0.36374 (14) | 1.0555 (3) | 0.0148 (5) | |
| H5A | 0.2784 | 0.4202 | 1.0308 | 0.018* | |
| C6 | 0.2402 (2) | 0.28743 (14) | 0.9938 (3) | 0.0150 (5) | |
| C7 | 0.11002 (19) | 0.29283 (14) | 0.8828 (3) | 0.0148 (5) | |
| C8 | −0.05110 (19) | 0.38757 (14) | 0.7226 (3) | 0.0168 (5) | |
| H8A | −0.1143 | 0.3517 | 0.7709 | 0.020* | |
| H8B | −0.0473 | 0.3685 | 0.5949 | 0.020* | |
| C9 | −0.0866 (2) | 0.48440 (16) | 0.7242 (4) | 0.0254 (6) | |
| H9A | −0.1695 | 0.4929 | 0.6501 | 0.038* | |
| H9B | −0.0251 | 0.5192 | 0.6722 | 0.038* | |
| H9C | −0.0879 | 0.5031 | 0.8515 | 0.038* | |
| C10 | 0.69687 (19) | 0.34151 (14) | 1.3465 (3) | 0.0142 (4) | |
| H10A | 0.7673 | 0.3210 | 1.4400 | 0.017* | |
| H10B | 0.6484 | 0.3841 | 1.4073 | 0.017* | |
| C11 | 0.75012 (19) | 0.38863 (14) | 1.1886 (3) | 0.0157 (5) | |
| H11A | 0.6801 | 0.4141 | 1.1011 | 0.019* | |
| H11B | 0.8047 | 0.4372 | 1.2419 | 0.019* | |
| H2A | 0.642 (2) | 0.2141 (18) | 1.310 (4) | 0.021 (7)* | |
| H5B | 0.888 (3) | 0.3148 (18) | 1.156 (4) | 0.028 (8)* |
| O1 | 0.0224 (8) | 0.0119 (8) | 0.0480 (12) | −0.0046 (7) | −0.0035 (8) | 0.0003 (8) |
| O2 | 0.0169 (8) | 0.0143 (8) | 0.0252 (9) | 0.0027 (6) | −0.0004 (7) | 0.0010 (7) |
| O3 | 0.0145 (7) | 0.0177 (8) | 0.0243 (9) | −0.0040 (6) | −0.0011 (7) | 0.0005 (7) |
| O4 | 0.0118 (7) | 0.0168 (8) | 0.0207 (9) | 0.0003 (6) | −0.0024 (6) | 0.0005 (7) |
| O5 | 0.0149 (8) | 0.0216 (9) | 0.0204 (9) | 0.0025 (6) | 0.0012 (7) | −0.0020 (7) |
| N1 | 0.0146 (9) | 0.0129 (9) | 0.0192 (10) | −0.0015 (7) | 0.0018 (7) | −0.0009 (8) |
| N2 | 0.0116 (8) | 0.0115 (9) | 0.0201 (10) | 0.0007 (7) | 0.0002 (8) | 0.0017 (8) |
| C1 | 0.0153 (11) | 0.0145 (10) | 0.0130 (11) | −0.0038 (8) | 0.0036 (8) | −0.0026 (9) |
| C2 | 0.0151 (10) | 0.0119 (10) | 0.0144 (11) | −0.0002 (8) | 0.0051 (8) | 0.0017 (8) |
| C3 | 0.0145 (10) | 0.0142 (11) | 0.0118 (11) | −0.0018 (8) | 0.0029 (8) | −0.0001 (8) |
| C4 | 0.0135 (10) | 0.0123 (10) | 0.0188 (12) | −0.0012 (8) | 0.0030 (8) | −0.0016 (9) |
| C5 | 0.0169 (10) | 0.0128 (10) | 0.0147 (11) | 0.0014 (8) | 0.0027 (8) | 0.0010 (9) |
| C6 | 0.0132 (10) | 0.0165 (11) | 0.0156 (11) | 0.0003 (8) | 0.0030 (9) | 0.0013 (9) |
| C7 | 0.0148 (10) | 0.0159 (11) | 0.0144 (11) | −0.0004 (8) | 0.0045 (9) | 0.0007 (9) |
| C8 | 0.0116 (10) | 0.0203 (11) | 0.0161 (11) | 0.0004 (8) | −0.0045 (9) | 0.0015 (9) |
| C9 | 0.0198 (11) | 0.0226 (13) | 0.0301 (14) | 0.0053 (9) | −0.0069 (10) | −0.0019 (11) |
| C10 | 0.0116 (9) | 0.0147 (10) | 0.0148 (11) | −0.0009 (8) | −0.0017 (8) | −0.0004 (9) |
| C11 | 0.0127 (10) | 0.0128 (10) | 0.0208 (11) | −0.0013 (8) | 0.0005 (9) | −0.0004 (9) |
| O1—N1 | 1.230 (2) | C4—C5 | 1.368 (3) |
| O2—N1 | 1.245 (2) | C4—H4A | 0.9300 |
| O3—C7 | 1.218 (3) | C5—C6 | 1.414 (3) |
| O4—C7 | 1.335 (3) | C5—H5A | 0.9300 |
| O4—C8 | 1.461 (2) | C6—C7 | 1.482 (3) |
| O5—C11 | 1.424 (3) | C8—C9 | 1.501 (3) |
| O5—H5B | 0.83 (3) | C8—H8A | 0.9700 |
| N1—C2 | 1.440 (3) | C8—H8B | 0.9700 |
| N2—C3 | 1.342 (3) | C9—H9A | 0.9600 |
| N2—C10 | 1.459 (3) | C9—H9B | 0.9600 |
| N2—H2A | 0.84 (3) | C9—H9C | 0.9600 |
| C1—C6 | 1.375 (3) | C10—C11 | 1.526 (3) |
| C1—C2 | 1.391 (3) | C10—H10A | 0.9700 |
| C1—H1A | 0.9300 | C10—H10B | 0.9700 |
| C2—C3 | 1.430 (3) | C11—H11A | 0.9700 |
| C3—C4 | 1.425 (3) | C11—H11B | 0.9700 |
| C7—O4—C8 | 116.01 (16) | O3—C7—C6 | 123.46 (19) |
| C11—O5—H5B | 110 (2) | O4—C7—C6 | 112.56 (18) |
| O1—N1—O2 | 121.21 (17) | O4—C8—C9 | 107.99 (17) |
| O1—N1—C2 | 118.86 (17) | O4—C8—H8A | 110.1 |
| O2—N1—C2 | 119.92 (17) | C9—C8—H8A | 110.1 |
| C3—N2—C10 | 125.21 (19) | O4—C8—H8B | 110.1 |
| C3—N2—H2A | 115.5 (18) | C9—C8—H8B | 110.1 |
| C10—N2—H2A | 119.1 (18) | H8A—C8—H8B | 108.4 |
| C6—C1—C2 | 121.12 (19) | C8—C9—H9A | 109.5 |
| C6—C1—H1A | 119.4 | C8—C9—H9B | 109.5 |
| C2—C1—H1A | 119.4 | H9A—C9—H9B | 109.5 |
| C1—C2—C3 | 121.68 (19) | C8—C9—H9C | 109.5 |
| C1—C2—N1 | 116.49 (18) | H9A—C9—H9C | 109.5 |
| C3—C2—N1 | 121.82 (19) | H9B—C9—H9C | 109.5 |
| N2—C3—C4 | 120.65 (19) | N2—C10—C11 | 113.65 (18) |
| N2—C3—C2 | 123.9 (2) | N2—C10—H10A | 108.8 |
| C4—C3—C2 | 115.47 (18) | C11—C10—H10A | 108.8 |
| C5—C4—C3 | 122.1 (2) | N2—C10—H10B | 108.8 |
| C5—C4—H4A | 118.9 | C11—C10—H10B | 108.8 |
| C3—C4—H4A | 118.9 | H10A—C10—H10B | 107.7 |
| C4—C5—C6 | 120.9 (2) | O5—C11—C10 | 112.94 (18) |
| C4—C5—H5A | 119.5 | O5—C11—H11A | 109.0 |
| C6—C5—H5A | 119.5 | C10—C11—H11A | 109.0 |
| C1—C6—C5 | 118.61 (19) | O5—C11—H11B | 109.0 |
| C1—C6—C7 | 118.53 (19) | C10—C11—H11B | 109.0 |
| C5—C6—C7 | 122.85 (19) | H11A—C11—H11B | 107.8 |
| O3—C7—O4 | 123.96 (19) | ||
| C6—C1—C2—C3 | 0.0 (3) | C3—C4—C5—C6 | 0.3 (3) |
| C6—C1—C2—N1 | 178.9 (2) | C2—C1—C6—C5 | −1.9 (3) |
| O1—N1—C2—C1 | −3.9 (3) | C2—C1—C6—C7 | 177.1 (2) |
| O2—N1—C2—C1 | 176.5 (2) | C4—C5—C6—C1 | 1.8 (3) |
| O1—N1—C2—C3 | 175.0 (2) | C4—C5—C6—C7 | −177.2 (2) |
| O2—N1—C2—C3 | −4.6 (3) | C8—O4—C7—O3 | −2.2 (3) |
| C10—N2—C3—C4 | −0.1 (3) | C8—O4—C7—C6 | 176.60 (18) |
| C10—N2—C3—C2 | −179.3 (2) | C1—C6—C7—O3 | 2.8 (3) |
| C1—C2—C3—N2 | −178.8 (2) | C5—C6—C7—O3 | −178.3 (2) |
| N1—C2—C3—N2 | 2.4 (3) | C1—C6—C7—O4 | −176.1 (2) |
| C1—C2—C3—C4 | 2.0 (3) | C5—C6—C7—O4 | 2.9 (3) |
| N1—C2—C3—C4 | −176.81 (19) | C7—O4—C8—C9 | 168.7 (2) |
| N2—C3—C4—C5 | 178.7 (2) | C3—N2—C10—C11 | −76.3 (3) |
| C2—C3—C4—C5 | −2.1 (3) | N2—C10—C11—O5 | −57.4 (2) |
| H··· | ||||
| N2—H2A···O2 | 0.84 (3) | 1.99 (3) | 2.642 (2) | 134 (2) |
| O5—H5B···O3i | 0.83 (3) | 2.02 (3) | 2.851 (2) | 177 (3) |
| C8—H8A···O5ii | 0.97 | 2.51 | 3.271 (3) | 135 |
| C10—H10A···O5iii | 0.97 | 2.54 | 3.267 (3) | 132 |
| C10—H10B···O1iv | 0.97 | 2.43 | 3.168 (3) | 133 |
| C11—H11A···O2v | 0.97 | 2.59 | 3.403 (3) | 142 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.84 (3) | 1.99 (3) | 2.642 (2) | 134 (2) |
| O5—H5 | 0.83 (3) | 2.02 (3) | 2.851 (2) | 177 (3) |
| C8—H8 | 0.97 | 2.51 | 3.271 (3) | 135 |
| C10—H10 | 0.97 | 2.54 | 3.267 (3) | 132 |
| C10—H10 | 0.97 | 2.43 | 3.168 (3) | 133 |
| C11—H11 | 0.97 | 2.59 | 3.403 (3) | 142 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .