Literature DB >> 21580640

12-(4-Methoxy-phen-yl)-10-phenyl-3,4,5,6,8,10-hexa-azatricyclo-[7.3.0.0]dodeca-1(9),2,4,7,11-penta-ene.

Mukesh M Jotani, Rina D Shah, Edward R T Tiekink.   

Abstract

In the title compound, C(19)H(14)N(6)O, the fused 12-membered tetra-zolo/pyrimidine/pyrrole ring system is almost planar (r.m.s. deviation = 0.013 Å). The 4-methoxy-phenyl and phenyl substituents on the pyrrole ring are both twisted with respect to the fused-ring system [dihedral angles = 25.39 (18) and 36.42 (18)°, respectively]. Intra-molecular C-H⋯N inter-actions occur. In the crystal, mol-ecules pack into layers in the ac plane and these are connected along the b axis via C-H⋯π and π-π [centroid-centroid separation = 3.608 (3) Å] inter-actions.

Entities:  

Year:  2010        PMID: 21580640      PMCID: PMC2983952          DOI: 10.1107/S160053681000869X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the biological activity of fused tetra­zolopyrimidines, see: Shishoo & Jain (1992 ▶); Desai & Shah (2006 ▶). For related structures, see: Jotani et al. (2010a ▶,b ▶); Shah et al. (2010 ▶). For semi-empirical quantum chemical calculations, see: Stewart (2009 ▶).

Experimental

Crystal data

C19H14N6O M = 342.36 Orthorhombic, a = 9.3537 (7) Å b = 23.6045 (19) Å c = 7.1543 (6) Å V = 1579.6 (2) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.35 × 0.25 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.967, T max = 0.981 16155 measured reflections 1666 independent reflections 1344 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.142 S = 1.12 1666 reflections 236 parameters 1 restraint H-atom parameters constrained Δρmax = 0.50 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681000869X/hb5355sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681000869X/hb5355Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H14N6OF(000) = 712
Mr = 342.36Dx = 1.440 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 2330 reflections
a = 9.3537 (7) Åθ = 2.0–32.0°
b = 23.6045 (19) ŵ = 0.10 mm1
c = 7.1543 (6) ÅT = 293 K
V = 1579.6 (2) Å3Block, colourless
Z = 40.35 × 0.25 × 0.20 mm
Bruker Kappa APEXII CCD diffractometer1666 independent reflections
Radiation source: fine-focus sealed tube1344 reflections with I > 2σ(I)
graphiteRint = 0.051
ω and φ scanθmax = 25.9°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→10
Tmin = 0.967, Tmax = 0.981k = −28→26
16155 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.142H-atom parameters constrained
S = 1.12w = 1/[σ2(Fo2) + (0.0924P)2 + 0.1003P] where P = (Fo2 + 2Fc2)/3
1666 reflections(Δ/σ)max = 0.001
236 parametersΔρmax = 0.50 e Å3
1 restraintΔρmin = −0.27 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.1311 (2)−0.24532 (10)0.1991 (5)0.0436 (7)
N10.6887 (3)0.03688 (12)0.2217 (6)0.0388 (7)
N20.8226 (3)0.01376 (15)0.2170 (8)0.0538 (9)
N30.8028 (3)−0.04038 (15)0.2108 (8)0.0570 (10)
N40.6627 (3)−0.05488 (13)0.2095 (7)0.0490 (9)
N50.5225 (3)0.11037 (11)0.2330 (6)0.0394 (8)
N60.2784 (3)0.07783 (11)0.2260 (5)0.0345 (7)
C10.6538 (4)0.09319 (16)0.2303 (7)0.0434 (9)
H10.72690.11990.23420.052*
C20.5911 (3)−0.00622 (14)0.2167 (8)0.0368 (8)
C30.4447 (3)0.00972 (13)0.2204 (7)0.0326 (7)
C40.4226 (3)0.06828 (13)0.2276 (7)0.0338 (8)
C50.2112 (3)0.02605 (13)0.2160 (7)0.0374 (8)
H50.11260.02110.21280.045*
C60.3086 (3)−0.01734 (14)0.2112 (7)0.0348 (8)
C70.2701 (3)−0.07795 (14)0.2027 (7)0.0336 (8)
C80.3593 (4)−0.12011 (15)0.2688 (6)0.0413 (11)
H80.4494−0.11050.31360.050*
C90.3172 (4)−0.17651 (15)0.2697 (7)0.0430 (11)
H90.3781−0.20430.31610.052*
C100.1848 (4)−0.19110 (13)0.2015 (7)0.0356 (8)
C110.0954 (4)−0.14989 (15)0.1288 (6)0.0380 (9)
H110.0071−0.15970.07860.046*
C120.1390 (4)−0.09411 (16)0.1317 (7)0.0382 (9)
H120.0782−0.06650.08420.046*
C130.2110 (4)−0.28780 (15)0.2954 (7)0.0487 (11)
H13A0.3060−0.28960.24490.073*
H13B0.1650−0.32390.28020.073*
H13C0.2157−0.27850.42590.073*
C140.2042 (3)0.13107 (13)0.2232 (7)0.0339 (8)
C150.2549 (4)0.17606 (15)0.3270 (7)0.0375 (9)
H150.33650.17210.40020.045*
C160.1822 (4)0.22714 (15)0.3202 (7)0.0448 (10)
H160.21730.25820.38600.054*
C170.0586 (4)0.23249 (15)0.2172 (8)0.0462 (9)
H170.00970.26680.21370.055*
C180.0080 (4)0.18610 (15)0.1186 (7)0.0456 (10)
H18−0.07650.18920.05110.055*
C190.0800 (4)0.13608 (15)0.1191 (7)0.0405 (9)
H190.04610.10550.05020.049*
U11U22U33U12U13U23
O10.0420 (14)0.0314 (12)0.057 (2)−0.0069 (10)−0.0019 (15)0.0016 (15)
N10.0246 (14)0.0442 (16)0.048 (2)0.0005 (12)−0.0045 (17)0.0019 (19)
N20.0259 (15)0.062 (2)0.073 (3)0.0029 (14)0.003 (2)0.000 (3)
N30.0294 (16)0.057 (2)0.085 (3)0.0061 (14)0.005 (2)0.000 (3)
N40.0281 (15)0.0476 (19)0.071 (3)0.0056 (12)0.0001 (18)−0.002 (2)
N50.0326 (15)0.0351 (15)0.050 (2)−0.0048 (12)−0.0031 (17)0.0032 (18)
N60.0292 (14)0.0285 (14)0.046 (2)0.0018 (10)−0.0029 (17)0.0011 (16)
C10.0353 (19)0.044 (2)0.051 (3)−0.0068 (15)−0.003 (2)0.002 (2)
C20.0297 (16)0.0390 (18)0.042 (2)0.0006 (14)0.001 (2)−0.001 (2)
C30.0287 (16)0.0324 (16)0.0366 (19)0.0006 (13)0.001 (2)−0.001 (2)
C40.0301 (16)0.0333 (17)0.038 (2)−0.0008 (13)−0.0004 (18)0.0011 (19)
C50.0277 (16)0.0322 (18)0.052 (2)−0.0003 (13)0.000 (2)−0.002 (2)
C60.0284 (16)0.0319 (17)0.044 (2)0.0006 (13)0.000 (2)0.004 (2)
C70.0290 (17)0.0308 (17)0.041 (2)0.0017 (13)0.0057 (18)−0.0007 (18)
C80.0305 (19)0.038 (2)0.055 (3)−0.0003 (15)−0.0042 (17)−0.0009 (18)
C90.034 (2)0.0303 (18)0.065 (3)0.0055 (15)−0.0018 (19)0.0029 (18)
C100.0358 (18)0.0299 (17)0.041 (2)−0.0039 (13)0.0079 (19)−0.0023 (18)
C110.0292 (17)0.042 (2)0.042 (2)−0.0046 (15)−0.0006 (17)0.0028 (19)
C120.0294 (18)0.0359 (19)0.049 (2)0.0050 (15)0.0026 (18)0.0034 (18)
C130.059 (3)0.0315 (19)0.055 (3)0.0006 (18)0.003 (2)0.0022 (19)
C140.0313 (17)0.0298 (16)0.041 (2)0.0008 (13)0.002 (2)0.0026 (19)
C150.0334 (19)0.0349 (19)0.044 (2)0.0012 (15)−0.0025 (17)0.0013 (18)
C160.048 (2)0.035 (2)0.051 (3)0.0011 (17)0.002 (2)−0.0088 (19)
C170.047 (2)0.0377 (19)0.054 (3)0.0110 (15)0.003 (2)0.001 (2)
C180.038 (2)0.043 (2)0.056 (3)0.0061 (16)−0.010 (2)0.004 (2)
C190.038 (2)0.0316 (18)0.052 (3)−0.0037 (15)−0.006 (2)−0.0005 (18)
O1—C101.375 (4)C8—C91.388 (5)
O1—C131.428 (5)C8—H80.9300
N1—N21.367 (4)C9—C101.374 (5)
N1—C21.367 (4)C9—H90.9300
N1—C11.370 (5)C10—C111.384 (5)
N2—N31.292 (5)C11—C121.379 (5)
N3—N41.355 (4)C11—H110.9300
N4—C21.330 (4)C12—H120.9300
N5—C11.294 (4)C13—H13A0.9600
N5—C41.364 (4)C13—H13B0.9600
N6—C41.368 (4)C13—H13C0.9600
N6—C51.376 (4)C14—C151.380 (5)
N6—C141.435 (4)C14—C191.385 (5)
C1—H10.9300C15—C161.385 (5)
C2—C31.420 (4)C15—H150.9300
C3—C41.399 (5)C16—C171.377 (6)
C3—C61.426 (4)C16—H160.9300
C5—C61.371 (4)C17—C181.386 (6)
C5—H50.9300C17—H170.9300
C6—C71.477 (4)C18—C191.359 (5)
C7—C121.380 (5)C18—H180.9300
C7—C81.382 (5)C19—H190.9300
C10—O1—C13117.2 (3)C10—C9—H9120.2
N2—N1—C2108.3 (3)C8—C9—H9120.2
N2—N1—C1127.3 (3)C9—C10—O1124.5 (3)
C2—N1—C1124.4 (3)C9—C10—C11120.1 (3)
N3—N2—N1105.4 (3)O1—C10—C11115.4 (3)
N2—N3—N4112.9 (3)C12—C11—C10119.1 (3)
C2—N4—N3105.6 (3)C12—C11—H11120.4
C1—N5—C4114.9 (3)C10—C11—H11120.4
C4—N6—C5107.7 (3)C11—C12—C7122.1 (3)
C4—N6—C14128.4 (3)C11—C12—H12118.9
C5—N6—C14123.8 (3)C7—C12—H12118.9
N5—C1—N1122.0 (3)O1—C13—H13A109.5
N5—C1—H1119.0O1—C13—H13B109.5
N1—C1—H1119.0H13A—C13—H13B109.5
N4—C2—N1107.9 (3)O1—C13—H13C109.5
N4—C2—C3135.6 (3)H13A—C13—H13C109.5
N1—C2—C3116.5 (3)H13B—C13—H13C109.5
C4—C3—C2113.9 (3)C15—C14—C19120.8 (3)
C4—C3—C6108.2 (3)C15—C14—N6120.0 (3)
C2—C3—C6137.8 (3)C19—C14—N6119.2 (3)
N5—C4—N6123.7 (3)C14—C15—C16118.8 (4)
N5—C4—C3128.3 (3)C14—C15—H15120.6
N6—C4—C3107.9 (3)C16—C15—H15120.6
C6—C5—N6111.2 (3)C17—C16—C15120.7 (4)
C6—C5—H5124.4C17—C16—H16119.6
N6—C5—H5124.4C15—C16—H16119.6
C5—C6—C3104.9 (3)C16—C17—C18119.1 (3)
C5—C6—C7124.2 (3)C16—C17—H17120.4
C3—C6—C7130.9 (3)C18—C17—H17120.4
C12—C7—C8117.6 (3)C19—C18—C17121.1 (4)
C12—C7—C6120.0 (3)C19—C18—H18119.5
C8—C7—C6122.4 (3)C17—C18—H18119.5
C7—C8—C9121.4 (3)C18—C19—C14119.4 (4)
C7—C8—H8119.3C18—C19—H19120.3
C9—C8—H8119.3C14—C19—H19120.3
C10—C9—C8119.6 (3)
C2—N1—N2—N3−0.4 (7)C2—C3—C6—C5−177.7 (6)
C1—N1—N2—N3179.5 (5)C4—C3—C6—C7−179.5 (5)
N1—N2—N3—N40.5 (8)C2—C3—C6—C73.6 (11)
N2—N3—N4—C2−0.5 (7)C5—C6—C7—C1223.8 (8)
C4—N5—C1—N10.3 (7)C3—C6—C7—C12−157.7 (5)
N2—N1—C1—N5179.6 (5)C5—C6—C7—C8−154.3 (5)
C2—N1—C1—N5−0.5 (8)C3—C6—C7—C824.2 (9)
N3—N4—C2—N10.2 (6)C12—C7—C8—C9−2.1 (7)
N3—N4—C2—C3−179.7 (7)C6—C7—C8—C9176.0 (4)
N2—N1—C2—N40.1 (6)C7—C8—C9—C100.8 (7)
C1—N1—C2—N4−179.8 (5)C8—C9—C10—O1−178.6 (4)
N2—N1—C2—C3−179.9 (5)C8—C9—C10—C111.3 (7)
C1—N1—C2—C30.2 (8)C13—O1—C10—C98.3 (6)
N4—C2—C3—C4−179.7 (6)C13—O1—C10—C11−171.7 (4)
N1—C2—C3—C40.3 (7)C9—C10—C11—C12−2.1 (7)
N4—C2—C3—C6−2.9 (12)O1—C10—C11—C12177.8 (4)
N1—C2—C3—C6177.1 (6)C10—C11—C12—C70.8 (7)
C1—N5—C4—N6−178.8 (5)C8—C7—C12—C111.3 (7)
C1—N5—C4—C30.2 (8)C6—C7—C12—C11−176.9 (4)
C5—N6—C4—N5178.6 (5)C4—N6—C14—C15−39.1 (7)
C14—N6—C4—N52.3 (8)C5—N6—C14—C15145.1 (4)
C5—N6—C4—C3−0.6 (5)C4—N6—C14—C19142.5 (5)
C14—N6—C4—C3−176.9 (5)C5—N6—C14—C19−33.3 (7)
C2—C3—C4—N5−0.6 (8)C19—C14—C15—C16−2.3 (6)
C6—C3—C4—N5−178.3 (5)N6—C14—C15—C16179.3 (4)
C2—C3—C4—N6178.6 (4)C14—C15—C16—C172.3 (7)
C6—C3—C4—N60.9 (6)C15—C16—C17—C18−0.5 (7)
C4—N6—C5—C60.1 (5)C16—C17—C18—C19−1.4 (7)
C14—N6—C5—C6176.6 (5)C17—C18—C19—C141.4 (7)
N6—C5—C6—C30.4 (6)C15—C14—C19—C180.5 (7)
N6—C5—C6—C7179.2 (5)N6—C14—C19—C18178.8 (4)
C4—C3—C6—C5−0.8 (6)
Cg1 is the centroid of the C14–C19 ring.
D—H···AD—HH···AD···AD—H···A
C8—H8···N40.932.503.257 (5)138
C15—H15···N50.932.573.020 (5)111
C11—H11···Cg1i0.932.913.684 (5)141
C13—H13c···Cg1ii0.962.723.459 (5)134
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C14–C19 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8⋯N40.932.503.257 (5)138
C15—H15⋯N50.932.573.020 (5)111
C11—H11⋯Cg1i0.932.913.684 (5)141
C13—H13c⋯Cg1ii0.962.723.459 (5)134

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  7-(4-Chloro-phen-yl)-9-phenyl-7H-pyrrolo[3,2-e]tetra-zolo[1,5-c]pyrimidine.

Authors:  Rina D Shah; Mukesh M Jotani; Jerry P Jasinski
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-13

3.  7-(4-Methoxy-phen-yl)-5-methyl-9-phenyl-7H-pyrrolo[2',3':4,5]pyrimido[1,6-d]tetrazole.

Authors:  Mukesh M Jotani; Rina D Shah; Jerry P Jasinski
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-19

4.  7-(4-Bromo-phen-yl)-9-phenyl-7H-pyrrolo[3,2-e]tetra-zolo[1,5-c]pyrimidine.

Authors:  Mukesh M Jotani; Rina D Shah; Jerry P Jasinski; Ray J Butcher
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-10
  4 in total
  1 in total

1.  12-(4-Chloro-phen-yl)-7-methyl-10-phenyl-3,4,5,6,8,10-hexa-aza-tricyclo-[7.3.0.0]dodeca-1(9),2,4,7,11-penta-ene.

Authors:  Rina D Shah; Mukesh M Jotani; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-27
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.