| Literature DB >> 21580097 |
Mukesh M Jotani, Rina D Shah, Jerry P Jasinski.
Abstract
The title compound, C(20)H(16)N(6)O, is composed of a tetra-zolo ring and a 4-methoxy-phenyl and a benzene-substituted pyrrole ring at the 7 and 9 positions fused to a pyrimidine ring in a nearly planar fashion [maximum deviation of 0.018 (1) Å for the fused ring system]. A methyl group at the 5 position is also in the plane of the hetero cyclic system. The dihedral angle between the mean planes of the benzene and 4-methoxy-phenyl rings is 40.4 (2)°. The dihedral angles between the mean planes of the pyrimidine and the benzene and 4-methoxy-phenyl rings are 15.6 (5)° and 52.6 (7)°, respectively. A weak intra-molecular C-H⋯N hydrogen bond inter-action, which forms an S(7) graph-set motif, helps to establish the relative conformations of the tetrazolo and benzene rings. In the crystal, weak inter-molecular C-H⋯O, C-H⋯π and π-π stacking inter-actions [centroid-centroid distances = 3.5270 (16), 3.5113 (16), 3.7275 (17) and 3.7866 (17) Å] link the mol-ecules into a two-dimensional array obliquely parallel to (101) and propagating along the b axis.Entities:
Year: 2009 PMID: 21580097 PMCID: PMC2980237 DOI: 10.1107/S1600536809053653
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H16N6O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 5176 reflections |
| θ = 2.2–31.3° | |
| µ = 0.09 mm−1 | |
| β = 110.217 (2)° | Plate, yellow |
| 0.47 × 0.35 × 0.2 mm | |
| Bruker Kappa APEXII CCD diffractometer | 5137 independent reflections |
| Radiation source: fine-focus sealed tube | 3694 reflections with |
| graphite | |
| ω and φ scan | θmax = 30.0°, θmin = 1.6° |
| Absorption correction: multi-scan ( | |
| 42323 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 5137 reflections | Δρmax = 0.29 e Å−3 |
| 247 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0104 (12) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.49323 (7) | 0.66669 (14) | 0.35550 (5) | 0.0364 (2) | |
| N2 | 0.64444 (8) | 0.71967 (13) | 0.46114 (6) | 0.0390 (2) | |
| N3 | 0.60830 (8) | 0.78499 (13) | 0.56626 (5) | 0.0387 (2) | |
| N4 | 0.63253 (10) | 0.82763 (16) | 0.63905 (6) | 0.0503 (3) | |
| N5 | 0.54477 (10) | 0.84057 (18) | 0.64892 (6) | 0.0553 (3) | |
| N6 | 0.46241 (9) | 0.80796 (15) | 0.58676 (5) | 0.0461 (3) | |
| O1 | 0.67511 (8) | 0.63011 (14) | 0.14173 (5) | 0.0557 (3) | |
| C1 | 0.54006 (9) | 0.70521 (14) | 0.42843 (6) | 0.0342 (2) | |
| C2 | 0.46308 (9) | 0.72839 (14) | 0.45931 (6) | 0.0322 (2) | |
| C3 | 0.36448 (9) | 0.70460 (14) | 0.40206 (6) | 0.0331 (2) | |
| C4 | 0.38831 (9) | 0.66682 (16) | 0.34039 (6) | 0.0372 (2) | |
| H4 | 0.3383 | 0.6437 | 0.2933 | 0.045* | |
| C5 | 0.67850 (10) | 0.75945 (15) | 0.53047 (7) | 0.0400 (3) | |
| C6 | 0.50261 (9) | 0.77276 (14) | 0.53513 (6) | 0.0350 (2) | |
| C7 | 0.79065 (11) | 0.7757 (2) | 0.57366 (8) | 0.0538 (3) | |
| H7A | 0.8307 | 0.7651 | 0.5408 | 0.081* | |
| H7B | 0.8109 | 0.6735 | 0.6102 | 0.081* | |
| H7C | 0.8044 | 0.8991 | 0.5986 | 0.081* | |
| C8 | 0.25890 (9) | 0.71760 (15) | 0.40362 (6) | 0.0348 (2) | |
| C9 | 0.17475 (10) | 0.73306 (18) | 0.33836 (7) | 0.0437 (3) | |
| H9 | 0.1867 | 0.7361 | 0.2931 | 0.052* | |
| C10 | 0.07452 (11) | 0.7441 (2) | 0.33822 (8) | 0.0531 (3) | |
| H10 | 0.0183 | 0.7540 | 0.2931 | 0.064* | |
| C11 | 0.05569 (11) | 0.7407 (2) | 0.40303 (9) | 0.0572 (4) | |
| H11 | −0.0134 | 0.7493 | 0.4030 | 0.069* | |
| C12 | 0.13717 (12) | 0.7249 (2) | 0.46801 (9) | 0.0559 (4) | |
| H12 | 0.1242 | 0.7217 | 0.5129 | 0.067* | |
| C13 | 0.23768 (11) | 0.71372 (18) | 0.46865 (7) | 0.0444 (3) | |
| H13 | 0.2932 | 0.7032 | 0.5141 | 0.053* | |
| C14 | 0.54240 (9) | 0.65119 (16) | 0.30183 (6) | 0.0352 (2) | |
| C15 | 0.50818 (9) | 0.76648 (17) | 0.24049 (6) | 0.0409 (3) | |
| H15 | 0.4533 | 0.8542 | 0.2348 | 0.049* | |
| C16 | 0.55355 (10) | 0.75407 (18) | 0.18782 (7) | 0.0437 (3) | |
| H16 | 0.5294 | 0.8320 | 0.1454 | 0.052* | |
| C17 | 0.63448 (9) | 0.62818 (17) | 0.19641 (6) | 0.0397 (3) | |
| C18 | 0.66942 (9) | 0.51457 (18) | 0.25825 (7) | 0.0430 (3) | |
| H18 | 0.7254 | 0.4291 | 0.2646 | 0.052* | |
| C19 | 0.62275 (9) | 0.52564 (17) | 0.31077 (6) | 0.0413 (3) | |
| H19 | 0.6461 | 0.4467 | 0.3530 | 0.050* | |
| C20 | 0.75810 (14) | 0.5043 (3) | 0.14708 (10) | 0.0782 (6) | |
| H20A | 0.8168 | 0.5324 | 0.1918 | 0.117* | |
| H20B | 0.7795 | 0.5207 | 0.1043 | 0.117* | |
| H20C | 0.7354 | 0.3728 | 0.1488 | 0.117* |
| N1 | 0.0378 (5) | 0.0443 (5) | 0.0276 (5) | 0.0018 (4) | 0.0121 (4) | −0.0010 (4) |
| N2 | 0.0382 (5) | 0.0396 (5) | 0.0362 (5) | 0.0018 (4) | 0.0092 (4) | 0.0011 (4) |
| N3 | 0.0492 (6) | 0.0345 (4) | 0.0271 (5) | −0.0023 (4) | 0.0064 (4) | 0.0001 (3) |
| N4 | 0.0663 (8) | 0.0509 (6) | 0.0272 (5) | −0.0076 (5) | 0.0080 (5) | −0.0035 (4) |
| N5 | 0.0717 (8) | 0.0613 (7) | 0.0300 (6) | −0.0110 (6) | 0.0139 (5) | −0.0068 (5) |
| N6 | 0.0620 (7) | 0.0495 (6) | 0.0284 (5) | −0.0074 (5) | 0.0175 (5) | −0.0042 (4) |
| O1 | 0.0641 (6) | 0.0690 (6) | 0.0459 (5) | 0.0180 (5) | 0.0340 (5) | 0.0111 (4) |
| C1 | 0.0401 (6) | 0.0329 (5) | 0.0285 (5) | 0.0015 (4) | 0.0105 (4) | 0.0016 (4) |
| C2 | 0.0406 (6) | 0.0288 (4) | 0.0272 (5) | 0.0002 (4) | 0.0118 (4) | 0.0018 (4) |
| C3 | 0.0388 (6) | 0.0327 (5) | 0.0278 (5) | 0.0006 (4) | 0.0115 (4) | 0.0016 (4) |
| C4 | 0.0365 (6) | 0.0436 (6) | 0.0298 (5) | 0.0000 (4) | 0.0095 (5) | −0.0017 (4) |
| C5 | 0.0437 (7) | 0.0334 (5) | 0.0373 (6) | 0.0010 (4) | 0.0069 (5) | 0.0014 (4) |
| C6 | 0.0458 (6) | 0.0289 (5) | 0.0293 (5) | −0.0020 (4) | 0.0115 (5) | 0.0017 (4) |
| C7 | 0.0451 (7) | 0.0510 (7) | 0.0520 (8) | −0.0023 (5) | −0.0001 (6) | −0.0040 (6) |
| C8 | 0.0407 (6) | 0.0320 (5) | 0.0326 (6) | −0.0005 (4) | 0.0137 (5) | −0.0007 (4) |
| C9 | 0.0426 (7) | 0.0532 (7) | 0.0346 (6) | 0.0003 (5) | 0.0124 (5) | −0.0012 (5) |
| C10 | 0.0404 (7) | 0.0647 (8) | 0.0496 (8) | 0.0015 (6) | 0.0096 (6) | −0.0037 (6) |
| C11 | 0.0430 (8) | 0.0684 (9) | 0.0646 (10) | −0.0028 (6) | 0.0244 (7) | −0.0089 (7) |
| C12 | 0.0543 (8) | 0.0711 (9) | 0.0512 (8) | −0.0043 (7) | 0.0297 (7) | −0.0068 (6) |
| C13 | 0.0464 (7) | 0.0536 (7) | 0.0349 (6) | −0.0008 (5) | 0.0161 (5) | −0.0016 (5) |
| C14 | 0.0369 (6) | 0.0420 (5) | 0.0277 (5) | −0.0006 (4) | 0.0124 (4) | −0.0023 (4) |
| C15 | 0.0381 (6) | 0.0512 (6) | 0.0327 (6) | 0.0103 (5) | 0.0113 (5) | 0.0035 (5) |
| C16 | 0.0448 (7) | 0.0550 (7) | 0.0312 (6) | 0.0087 (5) | 0.0129 (5) | 0.0090 (5) |
| C17 | 0.0416 (6) | 0.0474 (6) | 0.0337 (6) | 0.0020 (5) | 0.0174 (5) | 0.0000 (4) |
| C18 | 0.0451 (7) | 0.0448 (6) | 0.0426 (7) | 0.0110 (5) | 0.0195 (5) | 0.0049 (5) |
| C19 | 0.0472 (7) | 0.0433 (6) | 0.0348 (6) | 0.0075 (5) | 0.0158 (5) | 0.0069 (4) |
| C20 | 0.0943 (13) | 0.0825 (11) | 0.0864 (12) | 0.0367 (10) | 0.0674 (11) | 0.0245 (9) |
| N1—C1 | 1.3661 (14) | C8—C9 | 1.3942 (17) |
| N1—C4 | 1.3680 (15) | C9—C10 | 1.3783 (18) |
| N1—C14 | 1.4294 (14) | C9—H9 | 0.9500 |
| N2—C5 | 1.2951 (16) | C10—C11 | 1.371 (2) |
| N2—C1 | 1.3567 (15) | C10—H10 | 0.9500 |
| N3—C6 | 1.3691 (16) | C11—C12 | 1.372 (2) |
| N3—N4 | 1.3699 (14) | C11—H11 | 0.9500 |
| N3—C5 | 1.3819 (17) | C12—C13 | 1.379 (2) |
| N4—N5 | 1.2879 (17) | C12—H12 | 0.9500 |
| N5—N6 | 1.3591 (16) | C13—H13 | 0.9500 |
| N6—C6 | 1.3254 (15) | C14—C19 | 1.3768 (16) |
| O1—C17 | 1.3606 (13) | C14—C15 | 1.3828 (16) |
| O1—C20 | 1.4183 (17) | C15—C16 | 1.3730 (17) |
| C1—C2 | 1.3942 (16) | C15—H15 | 0.9500 |
| C2—C6 | 1.4178 (15) | C16—C17 | 1.3854 (17) |
| C2—C3 | 1.4351 (15) | C16—H16 | 0.9500 |
| C3—C4 | 1.3730 (15) | C17—C18 | 1.3835 (16) |
| C3—C8 | 1.4640 (16) | C18—C19 | 1.3825 (16) |
| C4—H4 | 0.9500 | C18—H18 | 0.9500 |
| C5—C7 | 1.4824 (18) | C19—H19 | 0.9500 |
| C7—H7A | 0.9800 | C20—H20A | 0.9800 |
| C7—H7B | 0.9800 | C20—H20B | 0.9800 |
| C7—H7C | 0.9800 | C20—H20C | 0.9800 |
| C8—C13 | 1.3920 (17) | ||
| C1—N1—C4 | 107.82 (9) | C10—C9—H9 | 119.3 |
| C1—N1—C14 | 126.90 (10) | C8—C9—H9 | 119.3 |
| C4—N1—C14 | 124.89 (9) | C11—C10—C9 | 120.20 (14) |
| C5—N2—C1 | 116.55 (11) | C11—C10—H10 | 119.9 |
| C6—N3—N4 | 108.19 (10) | C9—C10—H10 | 119.9 |
| C6—N3—C5 | 125.97 (10) | C10—C11—C12 | 119.60 (13) |
| N4—N3—C5 | 125.83 (11) | C10—C11—H11 | 120.2 |
| N5—N4—N3 | 105.27 (10) | C12—C11—H11 | 120.2 |
| N4—N5—N6 | 112.98 (11) | C11—C12—C13 | 120.58 (13) |
| C6—N6—N5 | 105.53 (11) | C11—C12—H12 | 119.7 |
| C17—O1—C20 | 118.22 (10) | C13—C12—H12 | 119.7 |
| N2—C1—N1 | 122.92 (10) | C12—C13—C8 | 120.93 (13) |
| N2—C1—C2 | 128.74 (10) | C12—C13—H13 | 119.5 |
| N1—C1—C2 | 108.33 (10) | C8—C13—H13 | 119.5 |
| C1—C2—C6 | 113.45 (10) | C19—C14—C15 | 120.24 (10) |
| C1—C2—C3 | 107.80 (9) | C19—C14—N1 | 121.15 (10) |
| C6—C2—C3 | 138.71 (11) | C15—C14—N1 | 118.61 (10) |
| C4—C3—C2 | 104.68 (10) | C16—C15—C14 | 119.92 (11) |
| C4—C3—C8 | 124.54 (10) | C16—C15—H15 | 120.0 |
| C2—C3—C8 | 130.77 (10) | C14—C15—H15 | 120.0 |
| N1—C4—C3 | 111.35 (10) | C15—C16—C17 | 120.19 (11) |
| N1—C4—H4 | 124.3 | C15—C16—H16 | 119.9 |
| C3—C4—H4 | 124.3 | C17—C16—H16 | 119.9 |
| N2—C5—N3 | 119.19 (11) | O1—C17—C18 | 124.85 (11) |
| N2—C5—C7 | 122.47 (12) | O1—C17—C16 | 115.35 (10) |
| N3—C5—C7 | 118.33 (11) | C18—C17—C16 | 119.78 (11) |
| N6—C6—N3 | 108.03 (10) | C19—C18—C17 | 119.91 (11) |
| N6—C6—C2 | 135.87 (11) | C19—C18—H18 | 120.0 |
| N3—C6—C2 | 116.10 (10) | C17—C18—H18 | 120.0 |
| C5—C7—H7A | 109.5 | C14—C19—C18 | 119.94 (11) |
| C5—C7—H7B | 109.5 | C14—C19—H19 | 120.0 |
| H7A—C7—H7B | 109.5 | C18—C19—H19 | 120.0 |
| C5—C7—H7C | 109.5 | O1—C20—H20A | 109.5 |
| H7A—C7—H7C | 109.5 | O1—C20—H20B | 109.5 |
| H7B—C7—H7C | 109.5 | H20A—C20—H20B | 109.5 |
| C13—C8—C9 | 117.35 (11) | O1—C20—H20C | 109.5 |
| C13—C8—C3 | 122.51 (11) | H20A—C20—H20C | 109.5 |
| C9—C8—C3 | 120.13 (10) | H20B—C20—H20C | 109.5 |
| C10—C9—C8 | 121.33 (12) | ||
| C6—N3—N4—N5 | −0.45 (12) | C5—N3—C6—C2 | 0.47 (15) |
| C5—N3—N4—N5 | 179.34 (10) | C1—C2—C6—N6 | 179.44 (12) |
| N3—N4—N5—N6 | 0.33 (14) | C3—C2—C6—N6 | 1.9 (2) |
| N4—N5—N6—C6 | −0.08 (14) | C1—C2—C6—N3 | −0.34 (13) |
| C5—N2—C1—N1 | 179.05 (10) | C3—C2—C6—N3 | −177.88 (11) |
| C5—N2—C1—C2 | 0.35 (17) | C4—C3—C8—C13 | 165.29 (11) |
| C4—N1—C1—N2 | −178.52 (10) | C2—C3—C8—C13 | −15.64 (17) |
| C14—N1—C1—N2 | −5.42 (17) | C4—C3—C8—C9 | −14.18 (16) |
| C4—N1—C1—C2 | 0.41 (12) | C2—C3—C8—C9 | 164.89 (11) |
| C14—N1—C1—C2 | 173.51 (10) | C13—C8—C9—C10 | 0.00 (17) |
| N2—C1—C2—C6 | −0.04 (16) | C3—C8—C9—C10 | 179.50 (11) |
| N1—C1—C2—C6 | −178.89 (9) | C8—C9—C10—C11 | 0.3 (2) |
| N2—C1—C2—C3 | 178.25 (10) | C9—C10—C11—C12 | −0.5 (2) |
| N1—C1—C2—C3 | −0.60 (11) | C10—C11—C12—C13 | 0.4 (2) |
| C1—C2—C3—C4 | 0.54 (11) | C11—C12—C13—C8 | −0.2 (2) |
| C6—C2—C3—C4 | 178.17 (12) | C9—C8—C13—C12 | −0.05 (17) |
| C1—C2—C3—C8 | −178.67 (10) | C3—C8—C13—C12 | −179.54 (11) |
| C6—C2—C3—C8 | −1.0 (2) | C1—N1—C14—C19 | 55.88 (16) |
| C1—N1—C4—C3 | −0.06 (13) | C4—N1—C14—C19 | −132.14 (12) |
| C14—N1—C4—C3 | −173.33 (10) | C1—N1—C14—C15 | −123.61 (12) |
| C2—C3—C4—N1 | −0.30 (12) | C4—N1—C14—C15 | 48.36 (16) |
| C8—C3—C4—N1 | 178.97 (9) | C19—C14—C15—C16 | 0.85 (18) |
| C1—N2—C5—N3 | −0.24 (15) | N1—C14—C15—C16 | −179.66 (11) |
| C1—N2—C5—C7 | 178.70 (10) | C14—C15—C16—C17 | −0.88 (19) |
| C6—N3—C5—N2 | −0.17 (16) | C20—O1—C17—C18 | 1.4 (2) |
| N4—N3—C5—N2 | −179.92 (10) | C20—O1—C17—C16 | −179.88 (14) |
| C6—N3—C5—C7 | −179.15 (10) | C15—C16—C17—O1 | −178.74 (12) |
| N4—N3—C5—C7 | 1.10 (16) | C15—C16—C17—C18 | 0.1 (2) |
| N5—N6—C6—N3 | −0.22 (12) | O1—C17—C18—C19 | 179.42 (12) |
| N5—N6—C6—C2 | 179.99 (12) | C16—C17—C18—C19 | 0.70 (19) |
| N4—N3—C6—N6 | 0.42 (12) | C15—C14—C19—C18 | −0.04 (18) |
| C5—N3—C6—N6 | −179.37 (10) | N1—C14—C19—C18 | −179.52 (11) |
| N4—N3—C6—C2 | −179.74 (9) | C17—C18—C19—C14 | −0.73 (19) |
| H··· | ||||
| C13—H13···N6 | 0.95 | 2.38 | 3.2159 (18) | 146 |
| C12—H12···O1i | 0.95 | 2.57 | 3.3902 (17) | 144 |
| C7—H7B···Cg4ii | 0.96 | 2.90 | 3.620 (2) | 132 |
| C7—H7C···Cg4iii | 0.96 | 2.69 | 3.554 (2) | 150 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C13—H13⋯N6 | 0.95 | 2.38 | 3.2159 (18) | 146 |
| C12—H12⋯O1i | 0.95 | 2.57 | 3.3902 (17) | 144 |
| C7—H7 | 0.96 | 2.90 | 3.620 (2) | 132 |
| C7—H7 | 0.96 | 2.69 | 3.554 (2) | 150 |
Symmetry codes: (i) ; (ii) ; (iii) . Cg4 is the centroid of the C8–C13. ring.