Literature DB >> 21579822

5-Chloro-3-ethyl-sulfinyl-2-(4-fluoro-phen-yl)-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(16)H(12)ClFO(2)S, the 4-fluoro-phenyl ring is rotated out of the benzofuran plane, as indicated by the dihedral angle of 6.96 (5)°. The crystal structure exhibits a Cl⋯O inter-action with a Cl⋯O distance of 3.163 (1) Å.

Entities:  

Year:  2010        PMID: 21579822      PMCID: PMC2979967          DOI: 10.1107/S1600536810001728

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 2-(4-fluoro­phen­yl)-5-halo-3-methyl­sulfinyl-1-benzofuran derivatives, see: Choi et al. (2010 ▶). For the biological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Howlett et al. (1999 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For a review of halogen bonding, see: Politzer et al. (2007 ▶).

Experimental

Crystal data

C16H12ClFO2S M = 322.77 Triclinic, a = 7.2843 (1) Å b = 9.4590 (1) Å c = 10.7717 (2) Å α = 101.630 (1)° β = 99.301 (1)° γ = 104.471 (1)° V = 686.08 (2) Å3 Z = 2 Mo Kα radiation μ = 0.44 mm−1 T = 100 K 0.36 × 0.28 × 0.22 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.685, T max = 0.746 10971 measured reflections 2692 independent reflections 2549 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.088 S = 1.06 2692 reflections 190 parameters H-atom parameters constrained Δρmax = 0.53 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810001728/pk2225sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810001728/pk2225Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12ClFO2SZ = 2
Mr = 322.77F(000) = 332
Triclinic, P1Dx = 1.562 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.2843 (1) ÅCell parameters from 8228 reflections
b = 9.4590 (1) Åθ = 2.3–27.5°
c = 10.7717 (2) ŵ = 0.44 mm1
α = 101.630 (1)°T = 100 K
β = 99.301 (1)°Block, colourless
γ = 104.471 (1)°0.36 × 0.28 × 0.22 mm
V = 686.08 (2) Å3
Bruker SMART APEXII CCD diffractometer2692 independent reflections
Radiation source: Rotating Anode2549 reflections with I > 2σ(I)
Bruker HELIOS graded multilayer opticsRint = 0.023
Detector resolution: 10.0 pixels mm-1θmax = 26.0°, θmin = 2.0°
φ and ω scansh = −8→8
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −11→11
Tmin = 0.685, Tmax = 0.746l = −13→13
10971 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: difference Fourier map
wR(F2) = 0.088H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0438P)2 + 0.4635P] where P = (Fo2 + 2Fc2)/3
2692 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.53 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.45255 (6)0.80712 (5)0.40708 (4)0.02482 (13)
Cl0.28282 (7)0.27078 (5)−0.05264 (4)0.03514 (14)
F0.25946 (19)0.84365 (15)1.02077 (10)0.0444 (3)
O10.20936 (16)0.41731 (12)0.48378 (11)0.0220 (2)
O20.5927 (2)0.79848 (16)0.32129 (14)0.0365 (3)
C10.3394 (2)0.62050 (18)0.41357 (15)0.0206 (3)
C20.2984 (2)0.48819 (18)0.30777 (15)0.0208 (3)
C30.3201 (2)0.46061 (19)0.17918 (16)0.0237 (3)
H30.37230.53870.14300.028*
C40.2602 (2)0.3116 (2)0.10851 (16)0.0258 (4)
C50.1846 (3)0.1912 (2)0.16042 (17)0.0285 (4)
H50.14860.09270.10930.034*
C60.1631 (3)0.21813 (19)0.28749 (17)0.0258 (4)
H60.11290.13990.32400.031*
C70.2202 (2)0.36738 (18)0.35738 (15)0.0212 (3)
C80.2840 (2)0.57255 (18)0.51702 (16)0.0206 (3)
C90.2817 (2)0.64559 (19)0.64935 (15)0.0213 (3)
C100.2304 (2)0.5573 (2)0.73545 (17)0.0261 (4)
H100.20190.45290.70850.031*
C110.2220 (3)0.6242 (2)0.86001 (17)0.0304 (4)
H110.18490.56570.91660.036*
C120.2694 (3)0.7788 (2)0.89875 (16)0.0304 (4)
C130.3240 (3)0.8701 (2)0.81899 (17)0.0306 (4)
H130.35750.97450.84850.037*
C140.3279 (2)0.8025 (2)0.69353 (17)0.0262 (4)
H140.36200.86240.63740.031*
C150.2417 (3)0.8367 (2)0.31295 (17)0.0275 (4)
H15A0.28310.92500.28010.033*
H15B0.18120.75040.23900.033*
C160.0937 (3)0.8588 (2)0.39391 (19)0.0300 (4)
H16A0.15260.94520.46640.036*
H16B0.05050.77080.42510.036*
H16C−0.01550.87430.34130.036*
U11U22U33U12U13U23
S0.0245 (2)0.0222 (2)0.0283 (2)0.00369 (16)0.00953 (17)0.00866 (16)
Cl0.0472 (3)0.0381 (3)0.0213 (2)0.0177 (2)0.00961 (18)0.00222 (18)
F0.0576 (8)0.0547 (8)0.0209 (5)0.0212 (6)0.0129 (5)0.0003 (5)
O10.0256 (6)0.0205 (6)0.0219 (6)0.0071 (5)0.0080 (4)0.0070 (4)
O20.0333 (7)0.0367 (7)0.0437 (8)0.0072 (6)0.0211 (6)0.0138 (6)
C10.0200 (8)0.0200 (8)0.0226 (8)0.0061 (6)0.0062 (6)0.0059 (6)
C20.0187 (7)0.0223 (8)0.0226 (8)0.0081 (6)0.0050 (6)0.0052 (6)
C30.0234 (8)0.0275 (9)0.0226 (8)0.0098 (7)0.0072 (6)0.0071 (7)
C40.0265 (8)0.0315 (9)0.0214 (8)0.0136 (7)0.0063 (6)0.0041 (7)
C50.0303 (9)0.0240 (8)0.0296 (9)0.0114 (7)0.0039 (7)0.0012 (7)
C60.0274 (8)0.0210 (8)0.0303 (9)0.0083 (7)0.0068 (7)0.0072 (7)
C70.0213 (8)0.0234 (8)0.0215 (8)0.0095 (6)0.0063 (6)0.0062 (6)
C80.0187 (7)0.0200 (8)0.0241 (8)0.0068 (6)0.0051 (6)0.0060 (6)
C90.0184 (7)0.0258 (8)0.0203 (8)0.0075 (6)0.0043 (6)0.0057 (6)
C100.0275 (9)0.0284 (9)0.0242 (8)0.0093 (7)0.0067 (7)0.0082 (7)
C110.0324 (9)0.0401 (10)0.0237 (9)0.0131 (8)0.0095 (7)0.0135 (8)
C120.0298 (9)0.0432 (11)0.0183 (8)0.0152 (8)0.0057 (7)0.0019 (7)
C130.0320 (9)0.0289 (9)0.0280 (9)0.0096 (7)0.0065 (7)0.0005 (7)
C140.0271 (9)0.0269 (9)0.0248 (8)0.0070 (7)0.0077 (7)0.0063 (7)
C150.0343 (9)0.0255 (9)0.0254 (8)0.0103 (7)0.0072 (7)0.0100 (7)
C160.0256 (9)0.0284 (9)0.0375 (10)0.0088 (7)0.0076 (7)0.0102 (7)
Cl—O2i3.163 (1)C6—H60.9300
S—O21.489 (1)C8—C91.458 (2)
S—C11.772 (2)C9—C141.398 (2)
S—C151.8142 (18)C9—C101.402 (2)
Cl—C41.745 (2)C10—C111.381 (2)
F—C121.355 (2)C10—H100.9300
O1—C71.370 (2)C11—C121.373 (3)
O1—C81.381 (2)C11—H110.9300
C1—C81.367 (2)C12—C131.371 (3)
C1—C21.443 (2)C13—C141.382 (2)
C2—C71.391 (2)C13—H130.9300
C2—C31.399 (2)C14—H140.9300
C3—C41.382 (2)C15—C161.520 (2)
C3—H30.9300C15—H15A0.9700
C4—C51.398 (3)C15—H15B0.9700
C5—C61.383 (2)C16—H16A0.9600
C5—H50.9300C16—H16B0.9600
C6—C71.382 (2)C16—H16C0.9600
C4—Cl—O2i168.98 (6)C14—C9—C8121.88 (15)
O2—S—C1107.41 (8)C10—C9—C8119.66 (15)
O2—S—C15106.84 (8)C11—C10—C9120.48 (17)
C1—S—C1597.19 (8)C11—C10—H10119.8
C7—O1—C8106.92 (12)C9—C10—H10119.8
C8—C1—C2107.26 (14)C12—C11—C10118.76 (16)
C8—C1—S128.13 (13)C12—C11—H11120.6
C2—C1—S124.54 (12)C10—C11—H11120.6
C7—C2—C3119.43 (15)F—C12—C13118.64 (17)
C7—C2—C1105.04 (14)F—C12—C11118.45 (17)
C3—C2—C1135.52 (16)C13—C12—C11122.91 (16)
C4—C3—C2116.69 (15)C12—C13—C14118.13 (17)
C4—C3—H3121.7C12—C13—H13120.9
C2—C3—H3121.7C14—C13—H13120.9
C3—C4—C5123.17 (16)C13—C14—C9121.24 (16)
C3—C4—Cl118.61 (14)C13—C14—H14119.4
C5—C4—Cl118.21 (13)C9—C14—H14119.4
C6—C5—C4120.24 (16)C16—C15—S111.69 (12)
C6—C5—H5119.9C16—C15—H15A109.3
C4—C5—H5119.9S—C15—H15A109.3
C7—C6—C5116.50 (16)C16—C15—H15B109.3
C7—C6—H6121.7S—C15—H15B109.3
C5—C6—H6121.7H15A—C15—H15B107.9
O1—C7—C6125.40 (15)C15—C16—H16A109.5
O1—C7—C2110.66 (14)C15—C16—H16B109.5
C6—C7—C2123.94 (15)H16A—C16—H16B109.5
C1—C8—O1110.11 (14)C15—C16—H16C109.5
C1—C8—C9135.48 (15)H16A—C16—H16C109.5
O1—C8—C9114.40 (13)H16B—C16—H16C109.5
C14—C9—C10118.46 (15)
O2—S—C1—C8143.68 (15)C2—C1—C8—O1−0.18 (18)
C15—S—C1—C8−106.11 (16)S—C1—C8—O1−177.16 (11)
O2—S—C1—C2−32.81 (16)C2—C1—C8—C9−178.51 (17)
C15—S—C1—C277.40 (15)S—C1—C8—C94.5 (3)
C8—C1—C2—C7−0.29 (17)C7—O1—C8—C10.59 (17)
S—C1—C2—C7176.82 (12)C7—O1—C8—C9179.30 (13)
C8—C1—C2—C3179.92 (18)C1—C8—C9—C146.7 (3)
S—C1—C2—C3−3.0 (3)O1—C8—C9—C14−171.53 (14)
C7—C2—C3—C40.2 (2)C1—C8—C9—C10−173.73 (18)
C1—C2—C3—C4179.97 (17)O1—C8—C9—C108.0 (2)
C2—C3—C4—C5−1.2 (2)C14—C9—C10—C111.4 (2)
C2—C3—C4—Cl179.67 (12)C8—C9—C10—C11−178.16 (15)
C3—C4—C5—C61.2 (3)C9—C10—C11—C12−1.6 (3)
Cl—C4—C5—C6−179.67 (13)C10—C11—C12—F179.52 (16)
C4—C5—C6—C7−0.1 (3)C10—C11—C12—C130.4 (3)
C8—O1—C7—C6178.85 (15)F—C12—C13—C14−178.07 (16)
C8—O1—C7—C2−0.78 (17)C11—C12—C13—C141.1 (3)
C5—C6—C7—O1179.54 (15)C12—C13—C14—C9−1.3 (3)
C5—C6—C7—C2−0.9 (3)C10—C9—C14—C130.1 (3)
C3—C2—C7—O1−179.50 (13)C8—C9—C14—C13179.63 (16)
C1—C2—C7—O10.67 (17)O2—S—C15—C16−175.89 (12)
C3—C2—C7—C60.9 (2)C1—S—C15—C1673.42 (13)
C1—C2—C7—C6−178.98 (15)
  9 in total

1.  Inhibition of fibril formation in beta-amyloid peptide by a novel series of benzofurans.

Authors:  D R Howlett; A E Perry; F Godfrey; J E Swatton; K H Jennings; C Spitzfaden; H Wadsworth; S J Wood; R E Markwell
Journal:  Biochem J       Date:  1999-05-15       Impact factor: 3.857

2.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  An overview of halogen bonding.

Authors:  Peter Politzer; Pat Lane; Monica C Concha; Yuguang Ma; Jane S Murray
Journal:  J Mol Model       Date:  2006-09-30       Impact factor: 1.810

5.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

6.  2-(4-Fluoro-phen-yl)-5-iodo-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-04

7.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

8.  5-Bromo-2-(4-fluoro-phen-yl)-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-12

9.  5-Bromo-2-(4-fluoro-phen-yl)-7-methyl-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-19
  9 in total
  6 in total

1.  3-Ethyl-sulfinyl-5-fluoro-2-(4-iodo-phen-yl)-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30

2.  5-Chloro-3-ethyl-sulfinyl-2-(4-fluoro-phen-yl)-7-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-20

3.  3-Ethyl-sulfinyl-2-(4-fluoro-phen-yl)-5-iodo-7-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-13

4.  3-Ethyl-sulfinyl-2-(4-fluoro-phen-yl)-5-iodo-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-10

5.  2-(4-Chloro-phen-yl)-3-ethyl-sulfinyl-5-fluoro-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-06

6.  5-Chloro-3-ethyl-sulfinyl-2-(3-fluoro-phen-yl)-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-06
  6 in total

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