| Literature DB >> 21580565 |
P Ramesh, R Akalya, A Chandramohan, M N Ponnuswamy.
Abstract
In the title compound, C(5)H(7)N(2) (+)·C(6)H(2)N(3)O(7) (-), the 4-amino-pyridinium cation is essentially planar (r.m.s. deviation = 0.002 Å). The three nitro groups in the picrate anion are twisted away from the attached benzene ring [dihedral angles = 24.1 (1), 9.3 (3) and 21.4 (1)°]. In the crystal structure, the ions are linked into a three-dimensional network by N-H⋯O and C-H⋯O hydrogen bonds.Entities:
Year: 2010 PMID: 21580565 PMCID: PMC2984070 DOI: 10.1107/S1600536810011050
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H7N2+·C6H2N3O7− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1853 reflections |
| θ = 2.3–28.4° | |
| µ = 0.14 mm−1 | |
| β = 104.162 (5)° | Block, colourless |
| 0.22 × 0.19 × 0.16 mm | |
| Bruker SMART APEXII area-detector diffractometer | 3311 independent reflections |
| Radiation source: fine-focus sealed tube | 2637 reflections with |
| graphite | |
| ω and φ scans | θmax = 28.4°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 12562 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 3311 reflections | Δρmax = 0.24 e Å−3 |
| 221 parameters | Δρmin = −0.17 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.022 (2) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.87969 (13) | 0.03133 (9) | 0.06515 (7) | 0.0445 (3) | |
| O2 | 0.97300 (19) | 0.02415 (13) | 0.25752 (9) | 0.0734 (4) | |
| O3 | 1.20628 (16) | 0.09976 (12) | 0.31608 (8) | 0.0632 (4) | |
| O4 | 1.35225 (16) | 0.45326 (12) | 0.18781 (9) | 0.0664 (4) | |
| O5 | 1.23283 (19) | 0.50978 (11) | 0.04473 (10) | 0.0700 (4) | |
| O6 | 0.92217 (17) | 0.22433 (12) | −0.16703 (7) | 0.0654 (4) | |
| O7 | 0.76429 (15) | 0.11110 (13) | −0.11519 (8) | 0.0686 (4) | |
| N1 | 0.37289 (15) | 0.09339 (12) | 0.03722 (9) | 0.0441 (3) | |
| H1 | 0.293 (2) | 0.0390 (18) | 0.0159 (15) | 0.068 (6)* | |
| C2 | 0.46638 (18) | 0.09158 (14) | 0.12753 (11) | 0.0463 (4) | |
| H2 | 0.4515 | 0.0322 | 0.1694 | 0.056* | |
| C3 | 0.58135 (18) | 0.17420 (14) | 0.15875 (11) | 0.0458 (4) | |
| H3 | 0.6451 | 0.1710 | 0.2215 | 0.055* | |
| C4 | 0.60534 (17) | 0.26532 (13) | 0.09690 (10) | 0.0396 (3) | |
| C5 | 0.50530 (19) | 0.26449 (15) | 0.00273 (11) | 0.0481 (4) | |
| H5 | 0.5164 | 0.3226 | −0.0410 | 0.058* | |
| C6 | 0.39262 (19) | 0.17818 (15) | −0.02361 (11) | 0.0496 (4) | |
| H6 | 0.3271 | 0.1781 | −0.0859 | 0.060* | |
| N7 | 0.71790 (19) | 0.34716 (14) | 0.12736 (12) | 0.0543 (4) | |
| H7A | 0.774 (3) | 0.347 (2) | 0.1874 (18) | 0.083 (7)* | |
| H7B | 0.721 (3) | 0.404 (2) | 0.0858 (16) | 0.072 (6)* | |
| C8 | 0.96034 (15) | 0.12354 (11) | 0.07454 (9) | 0.0325 (3) | |
| C9 | 1.06752 (16) | 0.16121 (11) | 0.16521 (9) | 0.0338 (3) | |
| C10 | 1.15984 (17) | 0.26074 (12) | 0.17653 (9) | 0.0364 (3) | |
| H10 | 1.2267 | 0.2793 | 0.2364 | 0.044* | |
| C11 | 1.15372 (17) | 0.33411 (11) | 0.09862 (9) | 0.0356 (3) | |
| C12 | 1.05870 (16) | 0.30622 (11) | 0.00840 (9) | 0.0346 (3) | |
| H12 | 1.0567 | 0.3554 | −0.0438 | 0.041* | |
| C13 | 0.96746 (15) | 0.20496 (11) | −0.00293 (8) | 0.0327 (3) | |
| N14 | 1.08227 (17) | 0.08920 (11) | 0.25121 (8) | 0.0442 (3) | |
| N15 | 1.25248 (16) | 0.43901 (11) | 0.11136 (9) | 0.0455 (3) | |
| N16 | 0.87848 (15) | 0.17853 (11) | −0.10042 (8) | 0.0400 (3) |
| O1 | 0.0511 (6) | 0.0403 (6) | 0.0398 (5) | −0.0122 (5) | 0.0065 (4) | 0.0028 (4) |
| O2 | 0.1011 (11) | 0.0720 (9) | 0.0468 (7) | −0.0287 (8) | 0.0177 (7) | 0.0152 (6) |
| O3 | 0.0769 (8) | 0.0652 (8) | 0.0380 (6) | 0.0098 (6) | −0.0041 (6) | 0.0119 (5) |
| O4 | 0.0691 (8) | 0.0613 (8) | 0.0600 (7) | −0.0231 (6) | −0.0010 (6) | −0.0163 (6) |
| O5 | 0.1005 (11) | 0.0484 (7) | 0.0610 (8) | −0.0287 (7) | 0.0195 (7) | 0.0038 (6) |
| O6 | 0.0881 (9) | 0.0751 (8) | 0.0285 (5) | −0.0328 (7) | 0.0058 (5) | 0.0052 (5) |
| O7 | 0.0656 (8) | 0.0859 (9) | 0.0437 (6) | −0.0384 (7) | −0.0070 (5) | 0.0073 (6) |
| N1 | 0.0392 (6) | 0.0432 (7) | 0.0462 (7) | −0.0040 (6) | 0.0036 (5) | −0.0038 (5) |
| C2 | 0.0447 (8) | 0.0427 (8) | 0.0476 (8) | −0.0033 (7) | 0.0037 (6) | 0.0092 (6) |
| C3 | 0.0437 (8) | 0.0485 (9) | 0.0393 (7) | −0.0047 (7) | −0.0010 (6) | 0.0064 (6) |
| C4 | 0.0370 (7) | 0.0388 (7) | 0.0434 (7) | 0.0002 (6) | 0.0103 (6) | −0.0004 (6) |
| C5 | 0.0498 (8) | 0.0520 (9) | 0.0413 (8) | −0.0002 (7) | 0.0090 (6) | 0.0107 (7) |
| C6 | 0.0475 (8) | 0.0611 (10) | 0.0363 (7) | 0.0000 (7) | 0.0025 (6) | 0.0014 (7) |
| N7 | 0.0582 (9) | 0.0496 (8) | 0.0526 (8) | −0.0150 (7) | 0.0087 (7) | 0.0019 (7) |
| C8 | 0.0353 (6) | 0.0326 (6) | 0.0303 (6) | 0.0013 (5) | 0.0090 (5) | −0.0008 (5) |
| C9 | 0.0420 (7) | 0.0331 (6) | 0.0267 (6) | 0.0048 (5) | 0.0094 (5) | 0.0013 (5) |
| C10 | 0.0440 (7) | 0.0366 (7) | 0.0266 (6) | 0.0026 (6) | 0.0046 (5) | −0.0065 (5) |
| C11 | 0.0424 (7) | 0.0304 (6) | 0.0344 (6) | −0.0039 (5) | 0.0103 (5) | −0.0060 (5) |
| C12 | 0.0431 (7) | 0.0317 (6) | 0.0296 (6) | −0.0004 (5) | 0.0102 (5) | 0.0006 (5) |
| C13 | 0.0366 (7) | 0.0342 (6) | 0.0260 (6) | −0.0004 (5) | 0.0053 (5) | −0.0006 (5) |
| N14 | 0.0647 (8) | 0.0376 (6) | 0.0309 (6) | 0.0053 (6) | 0.0130 (5) | 0.0027 (5) |
| N15 | 0.0547 (7) | 0.0380 (6) | 0.0451 (7) | −0.0098 (6) | 0.0147 (6) | −0.0108 (5) |
| N16 | 0.0461 (7) | 0.0396 (6) | 0.0306 (5) | −0.0053 (5) | 0.0021 (5) | 0.0023 (5) |
| O1—C8 | 1.2392 (16) | C5—C6 | 1.357 (2) |
| O2—N14 | 1.2069 (18) | C5—H5 | 0.93 |
| O3—N14 | 1.2293 (17) | C6—H6 | 0.93 |
| O4—N15 | 1.2214 (17) | N7—H7A | 0.88 (2) |
| O5—N15 | 1.2267 (18) | N7—H7B | 0.88 (2) |
| O6—N16 | 1.2216 (15) | C8—C13 | 1.4562 (17) |
| O7—N16 | 1.2130 (16) | C8—C9 | 1.4568 (17) |
| N1—C6 | 1.335 (2) | C9—C10 | 1.3613 (19) |
| N1—C2 | 1.3432 (19) | C9—N14 | 1.4578 (17) |
| N1—H1 | 0.91 (2) | C10—C11 | 1.3829 (19) |
| C2—C3 | 1.349 (2) | C10—H10 | 0.93 |
| C2—H2 | 0.93 | C11—C12 | 1.3832 (18) |
| C3—C4 | 1.408 (2) | C11—N15 | 1.4413 (17) |
| C3—H3 | 0.93 | C12—C13 | 1.3726 (18) |
| C4—N7 | 1.328 (2) | C12—H12 | 0.93 |
| C4—C5 | 1.408 (2) | C13—N16 | 1.4481 (16) |
| C6—N1—C2 | 120.05 (13) | C10—C9—C8 | 124.47 (11) |
| C6—N1—H1 | 118.0 (13) | C10—C9—N14 | 115.81 (12) |
| C2—N1—H1 | 121.9 (13) | C8—C9—N14 | 119.71 (12) |
| N1—C2—C3 | 121.28 (14) | C9—C10—C11 | 119.70 (12) |
| N1—C2—H2 | 119.4 | C9—C10—H10 | 120.1 |
| C3—C2—H2 | 119.4 | C11—C10—H10 | 120.1 |
| C2—C3—C4 | 120.36 (14) | C10—C11—C12 | 121.01 (12) |
| C2—C3—H3 | 119.8 | C10—C11—N15 | 119.22 (12) |
| C4—C3—H3 | 119.8 | C12—C11—N15 | 119.74 (12) |
| N7—C4—C3 | 120.62 (14) | C13—C12—C11 | 119.06 (12) |
| N7—C4—C5 | 122.52 (15) | C13—C12—H12 | 120.5 |
| C3—C4—C5 | 116.85 (13) | C11—C12—H12 | 120.5 |
| C6—C5—C4 | 119.43 (14) | C12—C13—N16 | 115.72 (11) |
| C6—C5—H5 | 120.3 | C12—C13—C8 | 124.57 (11) |
| C4—C5—H5 | 120.3 | N16—C13—C8 | 119.67 (11) |
| N1—C6—C5 | 122.02 (14) | O2—N14—O3 | 122.46 (13) |
| N1—C6—H6 | 119.0 | O2—N14—C9 | 119.79 (13) |
| C5—C6—H6 | 119.0 | O3—N14—C9 | 117.73 (13) |
| C4—N7—H7A | 119.8 (16) | O4—N15—O5 | 122.97 (14) |
| C4—N7—H7B | 115.0 (14) | O4—N15—C11 | 118.57 (13) |
| H7A—N7—H7B | 125 (2) | O5—N15—C11 | 118.46 (13) |
| O1—C8—C13 | 125.23 (12) | O7—N16—O6 | 121.00 (12) |
| O1—C8—C9 | 123.57 (12) | O7—N16—C13 | 120.38 (11) |
| C13—C8—C9 | 111.14 (11) | O6—N16—C13 | 118.61 (11) |
| C6—N1—C2—C3 | −0.1 (2) | C11—C12—C13—N16 | −176.65 (12) |
| N1—C2—C3—C4 | 0.4 (2) | C11—C12—C13—C8 | 1.1 (2) |
| C2—C3—C4—N7 | 179.73 (16) | O1—C8—C13—C12 | −179.30 (13) |
| C2—C3—C4—C5 | −0.4 (2) | C9—C8—C13—C12 | −2.13 (18) |
| N7—C4—C5—C6 | −179.98 (16) | O1—C8—C13—N16 | −1.6 (2) |
| C3—C4—C5—C6 | 0.2 (2) | C9—C8—C13—N16 | 175.54 (11) |
| C2—N1—C6—C5 | −0.2 (2) | C10—C9—N14—O2 | 155.92 (14) |
| C4—C5—C6—N1 | 0.1 (2) | C8—C9—N14—O2 | −24.9 (2) |
| O1—C8—C9—C10 | 178.44 (13) | C10—C9—N14—O3 | −22.44 (18) |
| C13—C8—C9—C10 | 1.22 (18) | C8—C9—N14—O3 | 156.74 (13) |
| O1—C8—C9—N14 | −0.7 (2) | C10—C11—N15—O4 | 8.1 (2) |
| C13—C8—C9—N14 | −177.89 (11) | C12—C11—N15—O4 | −169.71 (13) |
| C8—C9—C10—C11 | 0.7 (2) | C10—C11—N15—O5 | −172.10 (14) |
| N14—C9—C10—C11 | 179.83 (12) | C12—C11—N15—O5 | 10.1 (2) |
| C9—C10—C11—C12 | −1.9 (2) | C12—C13—N16—O7 | −160.64 (14) |
| C9—C10—C11—N15 | −179.76 (12) | C8—C13—N16—O7 | 21.5 (2) |
| C10—C11—C12—C13 | 1.1 (2) | C12—C13—N16—O6 | 20.26 (19) |
| N15—C11—C12—C13 | 178.88 (12) | C8—C13—N16—O6 | −157.61 (14) |
| H··· | ||||
| N1—H1···O1i | 0.91 (2) | 1.82 (2) | 2.6877 (16) | 158 (2) |
| N1—H1···O7i | 0.91 (2) | 2.34 (2) | 2.9359 (19) | 122 (2) |
| N7—H7A···O6ii | 0.88 (2) | 2.30 (3) | 3.139 (2) | 160 (2) |
| N7—H7B···O5iii | 0.88 (2) | 2.23 (2) | 3.065 (2) | 158 (2) |
| C2—H2···O4iv | 0.93 | 2.47 | 3.1373 (19) | 129 |
| C2—H2···O7i | 0.93 | 2.43 | 2.9980 (19) | 119 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1i | 0.91 (2) | 1.82 (2) | 2.6877 (16) | 158 (2) |
| N1—H1⋯O7i | 0.91 (2) | 2.34 (2) | 2.9359 (19) | 122 (2) |
| N7—H7 | 0.88 (2) | 2.30 (3) | 3.139 (2) | 160 (2) |
| N7—H7 | 0.88 (2) | 2.23 (2) | 3.065 (2) | 158 (2) |
| C2—H2⋯O4iv | 0.93 | 2.47 | 3.1373 (19) | 129 |
| C2—H2⋯O7i | 0.93 | 2.43 | 2.9980 (19) | 119 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .