| Literature DB >> 21580385 |
Eliyanti A Othman1, Siti K C Soh, Bohari M Yamin.
Abstract
The title compound, C(10)H(11)ClN(2)OS, adopts a cis-trans configuration with respect to the position of the phenyl and 3-chloro-propionyl groups relative to the thiono group across the C-N bonds. The benzene ring is perpendicular to the propionyl thio-urea fragment with a dihedral angle of 82.62 (10)°. An intra-molecular N-H⋯O inter-action occurs. The crystal structure is stabilized by inter-molecular N-H⋯S hydrogen bonds, which link pairs of mol-ecules, building up R(2) (2)(8) ring motifs, and C-H.. π inter-actions.Entities:
Year: 2010 PMID: 21580385 PMCID: PMC2983529 DOI: 10.1107/S1600536810005271
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H11ClN2OS | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3405 reflections | |
| θ = 2.1–25.5° | |
| µ = 0.49 mm−1 | |
| α = 112.811 (3)° | |
| β = 101.855 (3)° | Block, colourless |
| γ = 95.483 (3)° | 0.49 × 0.45 × 0.27 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 2103 independent reflections |
| Radiation source: fine-focus sealed tube | 1798 reflections with |
| Detector resolution: 83.66 pixels mm-1 | |
| ω scan | θmax = 25.5°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 5617 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2103 reflections | (Δ/σ)max < 0.001 |
| 136 parameters | Δρmax = 0.54 e Å−3 |
| 0 restraints | Δρmin = −0.43 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.23811 (13) | 1.37819 (8) | 0.50799 (7) | 0.0777 (3) | |
| S1 | 1.10045 (13) | 0.86771 (7) | 0.31949 (6) | 0.0653 (2) | |
| O1 | 0.5152 (3) | 1.07380 (16) | 0.16725 (14) | 0.0539 (4) | |
| N1 | 0.7823 (3) | 1.03263 (18) | 0.32922 (17) | 0.0497 (4) | |
| H1A | 0.8413 | 1.0614 | 0.4186 | 0.060* | |
| N2 | 0.7847 (3) | 0.87565 (18) | 0.10659 (17) | 0.0484 (4) | |
| H2A | 0.6781 | 0.9154 | 0.0753 | 0.058* | |
| C1 | 0.3405 (4) | 1.2689 (3) | 0.3640 (2) | 0.0594 (6) | |
| H1B | 0.2091 | 1.1935 | 0.2967 | 0.071* | |
| H1C | 0.3931 | 1.3244 | 0.3167 | 0.071* | |
| C2 | 0.5422 (4) | 1.2067 (2) | 0.4124 (2) | 0.0539 (5) | |
| H2B | 0.4968 | 1.1623 | 0.4707 | 0.065* | |
| H2C | 0.6809 | 1.2815 | 0.4696 | 0.065* | |
| C3 | 0.6079 (4) | 1.0991 (2) | 0.2902 (2) | 0.0434 (5) | |
| C4 | 0.8769 (4) | 0.9252 (2) | 0.2443 (2) | 0.0452 (5) | |
| C5 | 0.8541 (4) | 0.7586 (2) | 0.00691 (19) | 0.0435 (5) | |
| C6 | 1.0500 (4) | 0.7804 (2) | −0.0412 (2) | 0.0543 (5) | |
| H6A | 1.1404 | 0.8707 | −0.0087 | 0.065* | |
| C7 | 1.1101 (5) | 0.6653 (3) | −0.1391 (3) | 0.0618 (6) | |
| H7A | 1.2421 | 0.6787 | −0.1725 | 0.074* | |
| C8 | 0.9790 (5) | 0.5329 (3) | −0.1872 (2) | 0.0635 (7) | |
| H8A | 1.0221 | 0.4565 | −0.2524 | 0.076* | |
| C9 | 0.7837 (5) | 0.5125 (2) | −0.1393 (3) | 0.0646 (7) | |
| H9A | 0.6934 | 0.4221 | −0.1724 | 0.078* | |
| C10 | 0.7203 (4) | 0.6258 (2) | −0.0418 (2) | 0.0541 (5) | |
| H10A | 0.5872 | 0.6120 | −0.0094 | 0.065* |
| Cl1 | 0.0802 (5) | 0.0871 (5) | 0.0664 (4) | 0.0432 (4) | 0.0358 (4) | 0.0181 (4) |
| S1 | 0.0877 (5) | 0.0664 (4) | 0.0387 (3) | 0.0470 (3) | 0.0082 (3) | 0.0157 (3) |
| O1 | 0.0636 (9) | 0.0576 (9) | 0.0367 (8) | 0.0276 (7) | 0.0084 (7) | 0.0145 (7) |
| N1 | 0.0632 (11) | 0.0471 (10) | 0.0316 (8) | 0.0248 (8) | 0.0058 (7) | 0.0090 (7) |
| N2 | 0.0596 (11) | 0.0462 (10) | 0.0345 (9) | 0.0255 (8) | 0.0069 (7) | 0.0110 (7) |
| C1 | 0.0641 (14) | 0.0675 (15) | 0.0476 (12) | 0.0343 (12) | 0.0188 (11) | 0.0180 (11) |
| C2 | 0.0604 (13) | 0.0556 (13) | 0.0400 (11) | 0.0260 (11) | 0.0097 (10) | 0.0126 (10) |
| C3 | 0.0480 (11) | 0.0397 (10) | 0.0384 (11) | 0.0137 (9) | 0.0082 (8) | 0.0125 (8) |
| C4 | 0.0560 (12) | 0.0387 (10) | 0.0384 (10) | 0.0162 (9) | 0.0102 (9) | 0.0130 (8) |
| C5 | 0.0524 (11) | 0.0440 (11) | 0.0313 (9) | 0.0205 (9) | 0.0066 (8) | 0.0126 (8) |
| C6 | 0.0513 (12) | 0.0552 (13) | 0.0508 (12) | 0.0123 (10) | 0.0090 (10) | 0.0182 (10) |
| C7 | 0.0600 (14) | 0.0798 (18) | 0.0559 (14) | 0.0321 (13) | 0.0245 (11) | 0.0301 (13) |
| C8 | 0.0891 (18) | 0.0620 (15) | 0.0459 (13) | 0.0419 (14) | 0.0251 (12) | 0.0194 (11) |
| C9 | 0.0920 (19) | 0.0416 (12) | 0.0555 (14) | 0.0182 (12) | 0.0218 (13) | 0.0130 (10) |
| C10 | 0.0650 (14) | 0.0484 (12) | 0.0517 (12) | 0.0169 (10) | 0.0219 (11) | 0.0192 (10) |
| Cl1—C1 | 1.778 (2) | C2—H2B | 0.9700 |
| S1—C4 | 1.669 (2) | C2—H2C | 0.9700 |
| O1—C3 | 1.221 (2) | C5—C10 | 1.369 (3) |
| N1—C3 | 1.367 (3) | C5—C6 | 1.375 (3) |
| N1—C4 | 1.386 (3) | C6—C7 | 1.385 (3) |
| N1—H1A | 0.8600 | C6—H6A | 0.9300 |
| N2—C4 | 1.320 (3) | C7—C8 | 1.361 (4) |
| N2—C5 | 1.433 (2) | C7—H7A | 0.9300 |
| N2—H2A | 0.8600 | C8—C9 | 1.367 (4) |
| C1—C2 | 1.490 (3) | C8—H8A | 0.9300 |
| C1—H1B | 0.9700 | C9—C10 | 1.381 (3) |
| C1—H1C | 0.9700 | C9—H9A | 0.9300 |
| C2—C3 | 1.503 (3) | C10—H10A | 0.9300 |
| C3—N1—C4 | 128.77 (17) | N2—C4—N1 | 117.03 (18) |
| C3—N1—H1A | 115.6 | N2—C4—S1 | 123.88 (16) |
| C4—N1—H1A | 115.6 | N1—C4—S1 | 119.09 (15) |
| C4—N2—C5 | 122.97 (17) | C10—C5—C6 | 120.60 (19) |
| C4—N2—H2A | 118.5 | C10—C5—N2 | 119.22 (19) |
| C5—N2—H2A | 118.5 | C6—C5—N2 | 120.17 (19) |
| C2—C1—Cl1 | 111.32 (16) | C5—C6—C7 | 118.7 (2) |
| C2—C1—H1B | 109.4 | C5—C6—H6A | 120.7 |
| Cl1—C1—H1B | 109.4 | C7—C6—H6A | 120.7 |
| C2—C1—H1C | 109.4 | C8—C7—C6 | 121.0 (2) |
| Cl1—C1—H1C | 109.4 | C8—C7—H7A | 119.5 |
| H1B—C1—H1C | 108.0 | C6—C7—H7A | 119.5 |
| C1—C2—C3 | 111.71 (17) | C7—C8—C9 | 119.9 (2) |
| C1—C2—H2B | 109.3 | C7—C8—H8A | 120.1 |
| C3—C2—H2B | 109.3 | C9—C8—H8A | 120.1 |
| C1—C2—H2C | 109.3 | C8—C9—C10 | 120.1 (2) |
| C3—C2—H2C | 109.3 | C8—C9—H9A | 119.9 |
| H2B—C2—H2C | 107.9 | C10—C9—H9A | 119.9 |
| O1—C3—N1 | 122.97 (18) | C5—C10—C9 | 119.7 (2) |
| O1—C3—C2 | 123.17 (18) | C5—C10—H10A | 120.1 |
| N1—C3—C2 | 113.86 (17) | C9—C10—H10A | 120.1 |
| Cl1—C1—C2—C3 | 172.29 (17) | C4—N2—C5—C6 | −86.1 (3) |
| C4—N1—C3—O1 | −3.2 (4) | C10—C5—C6—C7 | −0.5 (3) |
| C4—N1—C3—C2 | 177.1 (2) | N2—C5—C6—C7 | −179.04 (19) |
| C1—C2—C3—O1 | 4.3 (3) | C5—C6—C7—C8 | −0.1 (3) |
| C1—C2—C3—N1 | −176.1 (2) | C6—C7—C8—C9 | 0.4 (4) |
| C5—N2—C4—N1 | −175.79 (19) | C7—C8—C9—C10 | −0.3 (4) |
| C5—N2—C4—S1 | 5.2 (3) | C6—C5—C10—C9 | 0.6 (3) |
| C3—N1—C4—N2 | −2.1 (3) | N2—C5—C10—C9 | 179.2 (2) |
| C3—N1—C4—S1 | 176.94 (18) | C8—C9—C10—C5 | −0.2 (4) |
| C4—N2—C5—C10 | 95.3 (3) |
| Cg1 is the centroid of the C5–C10 ring. |
| H··· | ||||
| N2—H2A···O1 | 0.86 | 2.01 | 2.677 (3) | 134 |
| N1—H1A···S1i | 0.86 | 2.53 | 3.3709 (19) | 165 |
| C1—H1C···Cg1ii | 0.97 | 2.84 | 3.466 | 123 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C5–C10 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.01 | 2.677 (3) | 134 |
| N1—H1 | 0.86 | 2.53 | 3.3709 (19) | 165 |
| C1—H1 | 0.97 | 2.84 | 3.466 | 123 |
Symmetry codes: (i) ; (ii) .