| Literature DB >> 21579933 |
Yaru Liu, Junshan Sun, Xiaoli Niu.
Abstract
The asymmetric unit of the title compound, [Cu(C(9)H(9)O(4))(2)(C(12)H(8)N(2))], contains one half-mol-ecule, the complete mol-ecule being generated by a twofold rotation axis. The Cu(II) atom exhibits a six-coordinated distorted octa-hedral geometry with two N atoms from the phenanthroline ligand [Cu-N 2.007 (2) Å] and four O atoms from two 3,4-dimethoxy-benzoate ligands [Cu-O 1.950 (1) and 2.524 (1) Å]. The difference in Cu-O bond distances indicates a strong Jahn-Teller effect. In the crystal, C-H⋯π inter-actions result in chains of mol-ecules along the c axis.Entities:
Year: 2009 PMID: 21579933 PMCID: PMC2980123 DOI: 10.1107/S1600536809052234
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C9H9O4)2(C12H8N2)] | |
| Monoclinic, | Mo |
| Cell parameters from 4483 reflections | |
| θ = 2.5–28.3° | |
| µ = 0.88 mm−1 | |
| β = 104.027 (1)° | |
| Block, blue | |
| 0.23 × 0.21 × 0.19 mm |
| Bruker SMART APEX diffractometer | 2351 independent reflections |
| Radiation source: fine-focus sealed tube | 2136 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 6857 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2351 reflections | (Δ/σ)max = 0.001 |
| 187 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.37 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.0000 | 0.96118 (3) | 0.2500 | 0.03588 (14) | |
| O1 | 0.00052 (11) | 0.87873 (12) | 0.36863 (7) | 0.0437 (3) | |
| O2 | 0.10961 (12) | 0.84452 (12) | 0.29637 (7) | 0.0445 (3) | |
| O5 | 0.11674 (13) | 0.56453 (14) | 0.55593 (8) | 0.0539 (4) | |
| O6 | 0.27611 (14) | 0.44980 (13) | 0.52542 (9) | 0.0592 (4) | |
| N1 | −0.10829 (13) | 1.09400 (15) | 0.21869 (8) | 0.0389 (4) | |
| C1 | 0.07772 (15) | 0.82281 (16) | 0.35206 (9) | 0.0364 (4) | |
| C2 | 0.13570 (15) | 0.72454 (16) | 0.39696 (9) | 0.0341 (4) | |
| C3 | 0.09898 (15) | 0.69411 (16) | 0.45613 (10) | 0.0365 (4) | |
| H3 | 0.0407 | 0.7364 | 0.4676 | 0.044* | |
| C4 | 0.14771 (16) | 0.60242 (17) | 0.49769 (10) | 0.0385 (4) | |
| C5 | 0.23698 (17) | 0.53957 (16) | 0.48098 (11) | 0.0406 (5) | |
| C6 | 0.27502 (16) | 0.57054 (18) | 0.42332 (11) | 0.0418 (5) | |
| H6 | 0.3349 | 0.5300 | 0.4126 | 0.050* | |
| C7 | 0.22402 (16) | 0.66243 (17) | 0.38092 (10) | 0.0389 (4) | |
| H7 | 0.2493 | 0.6823 | 0.3416 | 0.047* | |
| C8 | 0.0266 (2) | 0.6253 (2) | 0.57448 (12) | 0.0583 (6) | |
| H8A | 0.0494 | 0.7045 | 0.5868 | 0.087* | |
| H8B | 0.0079 | 0.5872 | 0.6135 | 0.087* | |
| H8C | −0.0385 | 0.6255 | 0.5356 | 0.087* | |
| C9 | 0.3730 (2) | 0.3888 (3) | 0.51835 (16) | 0.0801 (9) | |
| H9A | 0.3578 | 0.3514 | 0.4735 | 0.120* | |
| H9B | 0.3926 | 0.3307 | 0.5544 | 0.120* | |
| H9C | 0.4349 | 0.4426 | 0.5223 | 0.120* | |
| C19 | −0.21817 (17) | 1.0896 (2) | 0.18725 (11) | 0.0482 (5) | |
| H19 | −0.2525 | 1.0172 | 0.1756 | 0.058* | |
| C20 | −0.28296 (19) | 1.1910 (2) | 0.17132 (12) | 0.0588 (6) | |
| H20 | −0.3597 | 1.1854 | 0.1497 | 0.071* | |
| C21 | −0.23515 (19) | 1.2974 (2) | 0.18712 (11) | 0.0547 (6) | |
| H21 | −0.2793 | 1.3646 | 0.1774 | 0.066* | |
| C22 | −0.11811 (18) | 1.30632 (18) | 0.21845 (10) | 0.0454 (5) | |
| C23 | −0.05979 (16) | 1.20062 (17) | 0.23347 (9) | 0.0375 (4) | |
| C29 | −0.0562 (2) | 1.41293 (19) | 0.23526 (11) | 0.0541 (6) | |
| H29 | −0.0942 | 1.4839 | 0.2257 | 0.065* |
| Cu1 | 0.0365 (2) | 0.0395 (2) | 0.0311 (2) | 0.000 | 0.00731 (14) | 0.000 |
| O1 | 0.0448 (7) | 0.0459 (8) | 0.0407 (7) | 0.0081 (6) | 0.0110 (6) | 0.0047 (6) |
| O2 | 0.0497 (8) | 0.0496 (8) | 0.0357 (7) | 0.0074 (6) | 0.0134 (6) | 0.0075 (6) |
| O5 | 0.0605 (9) | 0.0624 (9) | 0.0452 (8) | 0.0236 (7) | 0.0253 (7) | 0.0197 (7) |
| O6 | 0.0618 (10) | 0.0582 (10) | 0.0624 (10) | 0.0301 (8) | 0.0244 (8) | 0.0214 (8) |
| N1 | 0.0365 (8) | 0.0467 (9) | 0.0323 (8) | 0.0016 (7) | 0.0060 (7) | −0.0015 (7) |
| C1 | 0.0377 (9) | 0.0363 (10) | 0.0330 (9) | −0.0037 (8) | 0.0044 (8) | −0.0019 (8) |
| C2 | 0.0369 (9) | 0.0339 (9) | 0.0304 (9) | −0.0024 (8) | 0.0062 (7) | −0.0038 (8) |
| C3 | 0.0359 (9) | 0.0377 (10) | 0.0362 (10) | 0.0059 (8) | 0.0093 (8) | −0.0022 (8) |
| C4 | 0.0400 (10) | 0.0423 (11) | 0.0345 (10) | 0.0049 (8) | 0.0115 (8) | 0.0023 (8) |
| C5 | 0.0415 (10) | 0.0381 (11) | 0.0410 (11) | 0.0074 (8) | 0.0077 (9) | 0.0009 (8) |
| C6 | 0.0391 (10) | 0.0430 (10) | 0.0449 (11) | 0.0061 (8) | 0.0133 (9) | −0.0075 (9) |
| C7 | 0.0426 (10) | 0.0421 (10) | 0.0336 (9) | −0.0013 (8) | 0.0125 (8) | −0.0040 (8) |
| C8 | 0.0647 (14) | 0.0700 (15) | 0.0497 (12) | 0.0195 (12) | 0.0321 (11) | 0.0105 (11) |
| C9 | 0.0833 (19) | 0.0836 (19) | 0.0792 (18) | 0.0514 (16) | 0.0313 (15) | 0.0234 (15) |
| C19 | 0.0376 (10) | 0.0640 (13) | 0.0404 (11) | 0.0020 (10) | 0.0042 (9) | −0.0029 (10) |
| C20 | 0.0405 (11) | 0.0834 (18) | 0.0493 (13) | 0.0151 (12) | 0.0046 (10) | 0.0050 (12) |
| C21 | 0.0580 (13) | 0.0639 (15) | 0.0431 (12) | 0.0226 (12) | 0.0139 (10) | 0.0087 (11) |
| C22 | 0.0599 (12) | 0.0508 (12) | 0.0290 (9) | 0.0124 (10) | 0.0173 (9) | 0.0053 (9) |
| C23 | 0.0435 (10) | 0.0451 (11) | 0.0255 (9) | 0.0019 (8) | 0.0116 (8) | 0.0001 (8) |
| C29 | 0.0834 (15) | 0.0426 (11) | 0.0415 (12) | 0.0092 (11) | 0.0251 (11) | 0.0036 (10) |
| Cu1—O2i | 1.950 (1) | C6—C7 | 1.392 (3) |
| Cu1—O2 | 1.950 (1) | C6—H6 | 0.9300 |
| Cu1—N1i | 2.007 (2) | C7—H7 | 0.9300 |
| Cu1—N1 | 2.007 (2) | C8—H8A | 0.9600 |
| Cu1—O1 | 2.524 (1) | C8—H8B | 0.9600 |
| O1—C1 | 1.244 (2) | C8—H8C | 0.9600 |
| O2—C1 | 1.276 (2) | C9—H9A | 0.9600 |
| O5—C4 | 1.365 (2) | C9—H9B | 0.9600 |
| O5—C8 | 1.419 (2) | C9—H9C | 0.9600 |
| O6—C5 | 1.359 (2) | C19—C20 | 1.394 (3) |
| O6—C9 | 1.406 (3) | C19—H19 | 0.9300 |
| N1—C19 | 1.331 (2) | C20—C21 | 1.351 (3) |
| N1—C23 | 1.355 (2) | C20—H20 | 0.9300 |
| C1—C2 | 1.497 (3) | C21—C22 | 1.412 (3) |
| C2—C7 | 1.387 (3) | C21—H21 | 0.9300 |
| C2—C3 | 1.392 (3) | C22—C23 | 1.396 (3) |
| C3—C4 | 1.374 (3) | C22—C29 | 1.429 (3) |
| C3—H3 | 0.9300 | C23—C23i | 1.443 (4) |
| C4—C5 | 1.406 (3) | C29—C29i | 1.350 (5) |
| C5—C6 | 1.375 (3) | C29—H29 | 0.9300 |
| O2i—Cu1—O2 | 93.72 (9) | C7—C6—H6 | 119.9 |
| O2i—Cu1—N1i | 170.07 (6) | C2—C7—C6 | 120.39 (18) |
| O2—Cu1—N1i | 92.84 (6) | C2—C7—H7 | 119.8 |
| O2i—Cu1—N1 | 92.84 (6) | C6—C7—H7 | 119.8 |
| O2—Cu1—N1 | 170.07 (6) | O5—C8—H8A | 109.5 |
| N1i—Cu1—N1 | 81.69 (9) | O5—C8—H8B | 109.5 |
| O2i—Cu1—O1 | 91.61 (5) | H8A—C8—H8B | 109.5 |
| O2—Cu1—O1 | 57.40 (5) | O5—C8—H8C | 109.5 |
| N1i—Cu1—O1 | 98.20 (5) | H8A—C8—H8C | 109.5 |
| N1—Cu1—O1 | 114.98 (5) | H8B—C8—H8C | 109.5 |
| C1—O1—Cu1 | 77.28 (11) | O6—C9—H9A | 109.5 |
| C1—O2—Cu1 | 102.80 (12) | O6—C9—H9B | 109.5 |
| C4—O5—C8 | 116.78 (15) | H9A—C9—H9B | 109.5 |
| C5—O6—C9 | 118.78 (19) | O6—C9—H9C | 109.5 |
| C19—N1—C23 | 118.06 (18) | H9A—C9—H9C | 109.5 |
| C19—N1—Cu1 | 128.66 (15) | H9B—C9—H9C | 109.5 |
| C23—N1—Cu1 | 113.28 (12) | N1—C19—C20 | 121.5 (2) |
| O1—C1—O2 | 122.24 (17) | N1—C19—H19 | 119.3 |
| O1—C1—C2 | 120.47 (17) | C20—C19—H19 | 119.3 |
| O2—C1—C2 | 117.28 (16) | C21—C20—C19 | 120.5 (2) |
| C7—C2—C3 | 119.18 (17) | C21—C20—H20 | 119.7 |
| C7—C2—C1 | 121.90 (17) | C19—C20—H20 | 119.7 |
| C3—C2—C1 | 118.91 (16) | C20—C21—C22 | 119.9 (2) |
| C4—C3—C2 | 120.81 (17) | C20—C21—H21 | 120.1 |
| C4—C3—H3 | 119.6 | C22—C21—H21 | 120.1 |
| C2—C3—H3 | 119.6 | C23—C22—C21 | 115.9 (2) |
| O5—C4—C3 | 125.33 (17) | C23—C22—C29 | 118.47 (19) |
| O5—C4—C5 | 114.98 (16) | C21—C22—C29 | 125.62 (19) |
| C3—C4—C5 | 119.69 (18) | N1—C23—C22 | 124.09 (17) |
| O6—C5—C6 | 126.41 (18) | N1—C23—C23i | 115.86 (10) |
| O6—C5—C4 | 113.81 (18) | C22—C23—C23i | 120.05 (12) |
| C6—C5—C4 | 119.77 (18) | C29i—C29—C22 | 121.46 (12) |
| C5—C6—C7 | 120.13 (18) | C29i—C29—H29 | 119.3 |
| C5—C6—H6 | 119.9 | C22—C29—H29 | 119.3 |
| C1 is the centroid of the C22,C23,C29,C22',C23',C29' ring. |
| H··· | ||||
| C8—H8B···Cg1 | 0.96 | 2.98 | 3.642 (3) | 127 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C8—H8 | 0.96 | 2.98 | 3.642 (3) | 127 |
C1 is the centroid of the C22,C23,C29,C22′,C23′,C29′ ring.