Literature DB >> 21522281

(2,2'-Bipyridine-κN,N')bis-(3-meth-oxy-benzoato-κO,O)copper(II) mono-hydrate.

Ming-Hao Lin1, Jing-Fan Zhou, Bin-Bin Liu, Jian-Li Lin.   

Abstract

The title compound, [Cu(C(8)H(7)O(3))(2)(C(10)H(8)N(2))]·H(2)O, is comprised of a Cu(II) ion, two 3-meth-oxy-benzoate ligands, a 2,2'-bipyridine (bipy) ligand and one uncoordinated water mol-ecule. The Cu(II) ion and the water O atom lie on a twofold axis. The Cu(II) ion exhibits a six-coordinate distorted octa-hedral geometry, with two N atoms from the bipy ligand [Cu-N = 1.9996 (16) Å] and four O atoms from two 3-meth-oxy-benzoate ligands [Cu-O = 1.9551 (15) and 2.6016 (16) Å]. The mol-ecules are linked by O-H⋯O and C-H⋯O hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2011        PMID: 21522281      PMCID: PMC3052164          DOI: 10.1107/S1600536811005563

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen bonds and crystal engineering, see: Aakeröy & Seddon (1993 ▶). For potential applications of transition metal complexes, see: Liu et al. (2007 ▶); Shibasaki & Yoshikawa (2002 ▶). For carboxylate compounds with six-coordinate metal atoms, see: Liu et al. (2010 ▶); Su et al. (2005 ▶).

Experimental

Crystal data

[Cu(C8H7O3)2(C10H8N2)]·H2O M = 540.01 Monoclinic, a = 19.888 (4) Å b = 10.887 (2) Å c = 11.612 (2) Å β = 103.62 (3)° V = 2443.5 (8) Å3 Z = 4 Mo Kα radiation μ = 0.94 mm−1 T = 293 K 0.1 × 0.1 × 0.1 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.710, T max = 0.780 12080 measured reflections 2796 independent reflections 2391 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.113 S = 1.05 2796 reflections 165 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.39 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976) ▶; software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811005563/rn2078sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005563/rn2078Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C8H7O3)2(C10H8N2)]·H2OF(000) = 1116
Mr = 540.01Dx = 1.468 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 12080 reflections
a = 19.888 (4) Åθ = 3.6–27.5°
b = 10.887 (2) ŵ = 0.94 mm1
c = 11.612 (2) ÅT = 293 K
β = 103.62 (3)°Block, blue
V = 2443.5 (8) Å30.1 × 0.1 × 0.1 mm
Z = 4
Rigaku R-AXIS RAPID diffractometer2796 independent reflections
Radiation source: fine-focus sealed tube2391 reflections with I > 2σ(I)
graphiteRint = 0.054
Detector resolution: 0 pixels mm-1θmax = 27.5°, θmin = 3.6°
ω scansh = −25→25
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −14→14
Tmin = 0.710, Tmax = 0.78l = −15→14
12080 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0638P)2 + 0.7842P] where P = (Fo2 + 2Fc2)/3
2796 reflections(Δ/σ)max = 0.001
165 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu0.00000.52776 (3)0.75000.04304 (15)
O1−0.04555 (7)0.40392 (14)0.82712 (14)0.0539 (4)
O2−0.12489 (8)0.44707 (15)0.66421 (15)0.0598 (4)
O3−0.15000 (9)0.11263 (17)1.05759 (15)0.0669 (5)
N1−0.03034 (8)0.66715 (15)0.83787 (14)0.0426 (4)
C1−0.10582 (10)0.39069 (18)0.75900 (19)0.0470 (5)
C2−0.15286 (10)0.30133 (18)0.79947 (19)0.0475 (5)
C3−0.21724 (12)0.2726 (2)0.7265 (2)0.0611 (6)
H3A−0.23170.30890.65230.073*
C4−0.25923 (13)0.1895 (3)0.7658 (3)0.0724 (7)
H4A−0.30210.17020.71700.087*
C5−0.23949 (12)0.1344 (2)0.8754 (3)0.0646 (6)
H5A−0.26880.07900.90030.078*
C6−0.17571 (11)0.16247 (19)0.9479 (2)0.0534 (5)
C7−0.13269 (10)0.24562 (19)0.9099 (2)0.0498 (5)
H7A−0.08980.26430.95900.060*
C8−0.19197 (18)0.0270 (3)1.1014 (3)0.0818 (9)
H8A−0.1674−0.00221.17770.123*
H8B−0.2028−0.04101.04760.123*
H8C−0.23400.06641.10850.123*
C9−0.06227 (11)0.6578 (2)0.92759 (18)0.0492 (5)
H9A−0.07050.58020.95490.059*
C10−0.08304 (12)0.7594 (2)0.97979 (19)0.0557 (5)
H10A−0.10550.75071.04110.067*
C11−0.07033 (13)0.8737 (2)0.9407 (2)0.0599 (6)
H11A−0.08380.94340.97570.072*
C12−0.03730 (12)0.8849 (2)0.8490 (2)0.0552 (5)
H12A−0.02820.96190.82150.066*
C13−0.01811 (10)0.77943 (18)0.79901 (17)0.0426 (4)
O40.00000.1586 (2)0.75000.0842 (8)
H41−0.01380.21090.79750.126*
U11U22U33U12U13U23
Cu0.0395 (2)0.0333 (2)0.0560 (2)0.0000.01071 (15)0.000
O10.0423 (8)0.0427 (8)0.0740 (10)−0.0074 (6)0.0083 (7)0.0071 (7)
O20.0532 (9)0.0576 (9)0.0692 (10)0.0083 (7)0.0159 (8)0.0082 (8)
O30.0646 (10)0.0641 (11)0.0774 (11)−0.0110 (8)0.0277 (9)0.0081 (8)
N10.0407 (9)0.0405 (9)0.0468 (9)−0.0013 (7)0.0108 (7)0.0020 (6)
C10.0435 (11)0.0356 (10)0.0642 (12)0.0055 (8)0.0174 (9)−0.0021 (9)
C20.0367 (10)0.0361 (10)0.0696 (13)0.0015 (8)0.0125 (9)−0.0064 (9)
C30.0457 (12)0.0546 (13)0.0777 (15)−0.0014 (10)0.0040 (11)−0.0038 (11)
C40.0400 (12)0.0667 (16)0.103 (2)−0.0126 (11)0.0024 (12)−0.0111 (15)
C50.0459 (13)0.0512 (13)0.1009 (19)−0.0111 (10)0.0258 (12)−0.0081 (12)
C60.0478 (12)0.0425 (11)0.0754 (14)−0.0041 (9)0.0254 (10)−0.0069 (10)
C70.0383 (10)0.0447 (11)0.0671 (13)−0.0052 (8)0.0135 (9)−0.0048 (9)
C80.093 (2)0.0693 (19)0.098 (2)−0.0154 (15)0.0526 (19)0.0040 (14)
C90.0461 (11)0.0513 (12)0.0508 (11)−0.0028 (9)0.0127 (9)0.0042 (9)
C100.0557 (13)0.0657 (14)0.0502 (11)0.0017 (11)0.0211 (10)−0.0018 (10)
C110.0696 (15)0.0536 (13)0.0614 (13)0.0079 (11)0.0255 (11)−0.0082 (10)
C120.0679 (14)0.0386 (11)0.0629 (13)0.0042 (10)0.0232 (11)−0.0006 (9)
C130.0430 (10)0.0384 (10)0.0462 (10)0.0013 (8)0.0100 (8)−0.0011 (7)
O40.124 (3)0.0464 (14)0.0887 (18)0.0000.0370 (17)0.000
Cu—O1i1.9551 (15)C5—C61.381 (3)
Cu—O11.9551 (15)C5—H5A0.9300
Cu—N1i1.9996 (16)C6—C71.387 (3)
Cu—N11.9996 (16)C7—H7A0.9300
O1—C11.279 (3)C8—H8A0.9600
O2—C11.239 (3)C8—H8B0.9600
O3—C61.368 (3)C8—H8C0.9600
O3—C81.423 (3)C9—C101.371 (3)
N1—C131.345 (2)C9—H9A0.9300
N1—C91.346 (3)C10—C111.369 (3)
C1—C21.500 (3)C10—H10A0.9300
C2—C71.390 (3)C11—C121.382 (3)
C2—C31.395 (3)C11—H11A0.9300
C3—C41.380 (4)C12—C131.380 (3)
C3—H3A0.9300C12—H12A0.9300
C4—C51.378 (4)C13—C13i1.483 (4)
C4—H4A0.9300O4—H410.8800
O1i—Cu—O192.80 (10)O3—C6—C7115.6 (2)
O1i—Cu—N1i93.53 (7)C5—C6—C7119.8 (2)
O1—Cu—N1i170.12 (6)C6—C7—C2120.8 (2)
O1i—Cu—N1170.12 (6)C6—C7—H7A119.6
O1—Cu—N193.53 (7)C2—C7—H7A119.6
N1i—Cu—N181.25 (9)O3—C8—H8A109.5
C1—O1—Cu105.20 (13)O3—C8—H8B109.5
C6—O3—C8118.1 (2)H8A—C8—H8B109.5
C13—N1—C9118.97 (17)O3—C8—H8C109.5
C13—N1—Cu114.74 (12)H8A—C8—H8C109.5
C9—N1—Cu126.27 (14)H8B—C8—H8C109.5
O2—C1—O1122.66 (19)N1—C9—C10121.83 (19)
O2—C1—C2121.1 (2)N1—C9—H9A119.1
O1—C1—C2116.23 (18)C10—C9—H9A119.1
C7—C2—C3119.2 (2)C11—C10—C9119.26 (19)
C7—C2—C1120.43 (19)C11—C10—H10A120.4
C3—C2—C1120.4 (2)C9—C10—H10A120.4
C4—C3—C2119.1 (2)C10—C11—C12119.6 (2)
C4—C3—H3A120.4C10—C11—H11A120.2
C2—C3—H3A120.4C12—C11—H11A120.2
C5—C4—C3121.9 (2)C13—C12—C11118.6 (2)
C5—C4—H4A119.1C13—C12—H12A120.7
C3—C4—H4A119.1C11—C12—H12A120.7
C4—C5—C6119.2 (2)N1—C13—C12121.68 (17)
C4—C5—H5A120.4N1—C13—C13i114.60 (10)
C6—C5—H5A120.4C12—C13—C13i123.71 (12)
O3—C6—C5124.6 (2)
D—H···AD—HH···AD···AD—H···A
O4—H41···O10.882.243.023 (3)147
C12—H12A···O4ii0.932.413.339 (3)178
C11—H11A···O3ii0.932.573.483 (3)166
C10—H10A···O2iii0.932.663.342 (3)131
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H41⋯O10.882.243.023 (3)147
C12—H12A⋯O4ii0.932.413.339 (3)178
C11—H11A⋯O3ii0.932.573.483 (3)166
C10—H10A⋯O2iii0.932.663.342 (3)131

Symmetry codes: (ii) ; (iii) .

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