Literature DB >> 22347111

2-Amino-5-nitro-benzoic acid.

Hakkı Yasin Odabaşoğlu, Orhan Büyükgüngör, Osman Ozan Avinç, Mustafa Odabaşoğlu.   

Abstract

In the title compound, C(7)H(6)N(2)O(4), an intra-molecular N-H⋯O hydrogen bond generates an S(6) ring. In the crystal, inversion dimers linked by pairs of O-H⋯O hydrogen bonds generate R(2) (2)(8) loops. Inter-molecular N-H⋯O and C-H⋯O hydrogen bonds then link the dimers, generating R(3) (3)(16)R(2) (1)(6) motifs. The whole mol-ecule is essentially planar, with the greatest deviation from the mean plane being 0.065 (2) Å.

Entities:  

Year:  2012        PMID: 22347111      PMCID: PMC3275255          DOI: 10.1107/S1600536812002474

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures of carb­oxy­lic acides, see: Mrozek & Glowiak (2004 ▶); Raza et al. (2010 ▶); Grabowski & Krygowski (1985 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For general background to o-amino­carb­oxy­lic acids, see: Fierz et al. (1949 ▶); Shore (2002 ▶).

Experimental

Crystal data

C7H6N2O4 M = 182.14 Monoclinic, a = 3.7026 (3) Å b = 17.4638 (16) Å c = 11.6953 (10) Å β = 92.210 (7)° V = 755.67 (11) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 296 K 0.55 × 0.23 × 0.06 mm

Data collection

Stoe IPDS II diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.964, T max = 0.992 5176 measured reflections 1567 independent reflections 884 reflections with I > 2σ(I) R int = 0.077

Refinement

R[F 2 > 2σ(F 2)] = 0.064 wR(F 2) = 0.127 S = 0.99 1567 reflections 118 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.15 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812002474/fk2050sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812002474/fk2050Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812002474/fk2050Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H6N2O4F(000) = 376
Mr = 182.14Dx = 1.601 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4323 reflections
a = 3.7026 (3) Åθ = 1.7–28.0°
b = 17.4638 (16) ŵ = 0.13 mm1
c = 11.6953 (10) ÅT = 296 K
β = 92.210 (7)°Needle, orange
V = 755.67 (11) Å30.55 × 0.23 × 0.06 mm
Z = 4
Stoe IPDS II diffractometer1567 independent reflections
Radiation source: fine-focus sealed tube884 reflections with I > 2σ(I)
graphiteRint = 0.077
Detector resolution: 6.67 pixels mm-1θmax = 26.5°, θmin = 2.1°
rotation method scansh = −4→4
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −21→21
Tmin = 0.964, Tmax = 0.992l = −13→14
5176 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.064Hydrogen site location: geom and difmap
wR(F2) = 0.127H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0486P)2] where P = (Fo2 + 2Fc2)/3
1567 reflections(Δ/σ)max < 0.001
118 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.15 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.6059 (8)0.35123 (17)0.7289 (3)0.0393 (7)
C20.7771 (8)0.34418 (16)0.8394 (2)0.0346 (7)
C30.8661 (8)0.27231 (16)0.8809 (3)0.0370 (7)
H30.98100.26780.95270.044*
C40.7890 (8)0.20744 (16)0.8187 (3)0.0380 (7)
C50.6210 (9)0.21311 (18)0.7098 (3)0.0444 (8)
H50.56880.16920.66730.053*
C60.5351 (9)0.28294 (17)0.6667 (3)0.0431 (8)
H60.42610.28620.59390.052*
C70.8660 (8)0.41190 (17)0.9097 (2)0.0383 (7)
N10.5107 (8)0.41812 (15)0.6824 (2)0.0548 (8)
H80.40740.41960.61540.066*
H70.55260.45990.71950.066*
N20.8912 (8)0.13354 (14)0.8636 (2)0.0502 (7)
O10.7787 (6)0.47709 (12)0.88101 (17)0.0513 (6)
O21.0433 (6)0.39701 (12)1.00684 (18)0.0528 (7)
H21.08370.43711.04150.079*
O31.0514 (7)0.12980 (13)0.9571 (2)0.0681 (8)
O40.8171 (9)0.07683 (14)0.8068 (2)0.0845 (10)
U11U22U33U12U13U23
C10.0370 (18)0.0391 (17)0.0415 (17)0.0007 (14)−0.0015 (13)0.0015 (13)
C20.0378 (17)0.0336 (16)0.0325 (15)−0.0016 (14)−0.0002 (12)−0.0043 (13)
C30.0391 (18)0.0395 (16)0.0321 (16)−0.0021 (14)−0.0016 (13)−0.0019 (12)
C40.0395 (18)0.0330 (16)0.0416 (18)−0.0020 (13)0.0014 (13)−0.0032 (13)
C50.048 (2)0.0421 (19)0.0429 (18)−0.0067 (15)−0.0033 (14)−0.0124 (14)
C60.0469 (19)0.047 (2)0.0346 (17)−0.0021 (15)−0.0062 (14)−0.0048 (13)
C70.0434 (19)0.0348 (18)0.0365 (16)−0.0006 (14)−0.0019 (14)−0.0014 (13)
N10.080 (2)0.0407 (15)0.0426 (15)0.0062 (15)−0.0147 (14)0.0012 (12)
N20.0641 (19)0.0336 (15)0.0525 (17)−0.0013 (14)−0.0031 (14)−0.0037 (13)
O10.0766 (17)0.0322 (12)0.0440 (12)−0.0002 (11)−0.0120 (11)−0.0020 (10)
O20.0786 (17)0.0343 (11)0.0440 (13)−0.0030 (11)−0.0187 (12)−0.0061 (9)
O30.101 (2)0.0436 (14)0.0573 (15)0.0040 (13)−0.0228 (15)0.0032 (11)
O40.134 (3)0.0334 (14)0.084 (2)−0.0019 (15)−0.0263 (18)−0.0118 (13)
C1—N11.330 (4)C5—H50.9300
C1—C61.416 (4)C6—H60.9300
C1—C21.423 (4)C7—O11.227 (3)
C2—C31.381 (4)C7—O21.316 (3)
C2—C71.470 (4)N1—H80.8600
C3—C41.370 (4)N1—H70.8600
C3—H30.9300N2—O41.218 (3)
C4—C51.399 (4)N2—O31.226 (3)
C4—N21.439 (4)O2—H20.8200
C5—C61.353 (4)
N1—C1—C6119.3 (3)C4—C5—H5120.2
N1—C1—C2123.3 (3)C5—C6—C1122.1 (3)
C6—C1—C2117.4 (3)C5—C6—H6118.9
C3—C2—C1119.3 (3)C1—C6—H6118.9
C3—C2—C7119.3 (3)O1—C7—O2122.5 (3)
C1—C2—C7121.4 (3)O1—C7—C2122.9 (3)
C4—C3—C2121.5 (3)O2—C7—C2114.7 (3)
C4—C3—H3119.2C1—N1—H8120.0
C2—C3—H3119.2C1—N1—H7120.0
C3—C4—C5120.1 (3)H8—N1—H7120.0
C3—C4—N2120.1 (3)O4—N2—O3122.3 (3)
C5—C4—N2119.8 (3)O4—N2—C4118.7 (3)
C6—C5—C4119.5 (3)O3—N2—C4119.0 (3)
C6—C5—H5120.2C7—O2—H2109.5
N1—C1—C2—C3179.9 (3)N1—C1—C6—C5−179.1 (3)
C6—C1—C2—C30.1 (4)C2—C1—C6—C50.8 (4)
N1—C1—C2—C7−1.0 (4)C3—C2—C7—O1−176.2 (3)
C6—C1—C2—C7179.1 (3)C1—C2—C7—O14.8 (5)
C1—C2—C3—C4−0.9 (4)C3—C2—C7—O23.1 (4)
C7—C2—C3—C4180.0 (3)C1—C2—C7—O2−176.0 (3)
C2—C3—C4—C51.0 (5)C3—C4—N2—O4179.5 (3)
C2—C3—C4—N2178.9 (3)C5—C4—N2—O4−2.5 (5)
C3—C4—C5—C6−0.1 (5)C3—C4—N2—O3−0.9 (5)
N2—C4—C5—C6−178.1 (3)C5—C4—N2—O3177.0 (3)
C4—C5—C6—C1−0.7 (5)
D—H···AD—HH···AD···AD—H···A
N1—H7···O10.862.062.694 (3)130
N1—H7···O4i0.862.473.030 (3)123
N1—H8···O3ii0.862.393.192 (4)155
O2—H2···O1iii0.821.812.631 (3)174
C6—H6···O3ii0.932.543.347 (4)145 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H7⋯O10.862.062.694 (3)130
N1—H7⋯O4i0.862.473.030 (3)123
N1—H8⋯O3ii0.862.393.192 (4)155
O2—H2⋯O1iii0.821.812.631 (3)174
C6—H6⋯O3ii0.932.543.347 (4)145 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

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