Literature DB >> 21579539

N'-(4-Cyano-benzyl-idene)thio-phene-2-carbohydrazide.

Yu-Feng Li, Fu-Gong Zhang, Fang-Fang Jian.   

Abstract

The title compound, C(13)H(9)N(3)OS, was prepared by the reaction of thio-phene-2-carbohydrazide and 4-formyl-benzonitrile. The dihedral angle between the benzene and thio-phene rings is 11.9 (1)°. In the crystal structure, mol-ecules are linked into centrosymmetric dimers by pairs of N-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21579539      PMCID: PMC2979571          DOI: 10.1107/S1600536810019215

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Girgis (2006 ▶); Jiang (2010 ▶).

Experimental

Crystal data

C13H9N3OS M = 255.29 Monoclinic, a = 6.3966 (13) Å b = 16.340 (3) Å c = 11.494 (2) Å β = 90.66 (3)° V = 1201.3 (4) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 293 K 0.21 × 0.20 × 0.18 mm

Data collection

Bruker SMART CCD diffractometer 11589 measured reflections 2746 independent reflections 1539 reflections with I > 2σ(I) R int = 0.066

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.145 S = 1.03 2746 reflections 163 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.32 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810019215/lh5046sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810019215/lh5046Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H9N3OSF(000) = 528
Mr = 255.29Dx = 1.412 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1539 reflections
a = 6.3966 (13) Åθ = 3.8–26.2°
b = 16.340 (3) ŵ = 0.26 mm1
c = 11.494 (2) ÅT = 293 K
β = 90.66 (3)°Block, colorless
V = 1201.3 (4) Å30.21 × 0.20 × 0.18 mm
Z = 4
Bruker SMART CCD diffractometer1539 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.066
graphiteθmax = 27.5°, θmin = 3.1°
φ and ω scansh = −8→8
11589 measured reflectionsk = −21→21
2746 independent reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.145H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0682P)2] where P = (Fo2 + 2Fc2)/3
2746 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N30.2706 (3)0.38738 (12)0.84452 (15)0.0428 (5)
N20.1294 (3)0.44128 (12)0.88894 (14)0.0440 (5)
H2A0.14990.46030.95790.053*
O1−0.1694 (3)0.51089 (11)0.87605 (12)0.0542 (5)
C20.8862 (4)0.20156 (14)0.79598 (18)0.0444 (6)
C9−0.0408 (4)0.46559 (14)0.82840 (17)0.0421 (6)
C40.7596 (4)0.29587 (15)0.93785 (18)0.0463 (6)
H4A0.77590.32241.00890.056*
C80.4290 (4)0.37040 (14)0.90796 (18)0.0430 (6)
H8A0.44570.39600.97970.052*
C70.7082 (4)0.21428 (16)0.72907 (19)0.0535 (7)
H7A0.68950.18580.65970.064*
C50.5847 (4)0.31123 (13)0.86961 (17)0.0408 (6)
C10−0.0772 (4)0.43914 (14)0.70730 (17)0.0431 (6)
C30.9102 (4)0.24155 (15)0.90156 (19)0.0487 (6)
H3B1.02780.23180.94790.058*
C13−0.0822 (5)0.38914 (16)0.5070 (2)0.0600 (8)
H13A−0.05680.36640.43440.072*
C60.5585 (4)0.26912 (15)0.76500 (19)0.0505 (6)
H6A0.43970.27800.71930.061*
C11−0.2581 (4)0.45925 (15)0.64795 (18)0.0514 (7)
H11A−0.36730.48880.68020.062*
C12−0.2588 (5)0.43005 (16)0.5330 (2)0.0595 (7)
H12A−0.36880.43800.48060.071*
S10.08838 (11)0.38350 (4)0.62050 (5)0.0558 (3)
N11.1789 (4)0.10803 (16)0.7206 (2)0.0703 (7)
C11.0483 (4)0.14800 (17)0.7545 (2)0.0516 (6)
U11U22U33U12U13U23
N30.0461 (13)0.0436 (12)0.0388 (9)0.0034 (10)0.0026 (9)−0.0032 (8)
N20.0477 (13)0.0492 (12)0.0351 (9)0.0055 (10)−0.0021 (9)−0.0080 (8)
O10.0571 (12)0.0630 (12)0.0425 (8)0.0186 (9)−0.0023 (8)−0.0126 (8)
C20.0460 (15)0.0440 (14)0.0432 (11)0.0022 (11)0.0034 (11)0.0055 (10)
C90.0471 (15)0.0414 (13)0.0376 (11)0.0018 (11)−0.0021 (11)−0.0001 (10)
C40.0514 (16)0.0490 (14)0.0384 (11)−0.0003 (12)−0.0013 (11)−0.0017 (10)
C80.0459 (15)0.0463 (14)0.0369 (11)−0.0016 (11)−0.0012 (10)0.0013 (10)
C70.0612 (18)0.0539 (16)0.0452 (12)0.0049 (13)−0.0047 (12)−0.0094 (11)
C50.0435 (15)0.0404 (13)0.0385 (11)−0.0002 (11)0.0022 (10)0.0036 (9)
C100.0507 (15)0.0401 (13)0.0386 (11)0.0018 (11)0.0006 (10)−0.0024 (9)
C30.0464 (16)0.0517 (15)0.0478 (12)0.0026 (12)−0.0026 (11)0.0065 (11)
C130.081 (2)0.0600 (18)0.0391 (12)0.0101 (16)−0.0040 (13)−0.0079 (11)
C60.0496 (16)0.0538 (16)0.0478 (12)0.0066 (13)−0.0063 (11)−0.0027 (11)
C110.0591 (18)0.0528 (16)0.0420 (12)0.0071 (13)−0.0077 (11)−0.0061 (11)
C120.071 (2)0.0596 (17)0.0477 (13)0.0082 (15)−0.0166 (13)−0.0056 (12)
S10.0620 (5)0.0646 (5)0.0407 (3)0.0109 (3)−0.0001 (3)−0.0088 (3)
N10.0686 (18)0.0765 (17)0.0658 (14)0.0177 (14)0.0068 (13)−0.0044 (12)
C10.0534 (17)0.0544 (16)0.0471 (13)0.0029 (13)0.0009 (12)0.0027 (12)
N3—C81.272 (3)C7—C61.378 (3)
N3—N21.365 (2)C7—H7A0.9300
N2—C91.345 (3)C5—C61.394 (3)
N2—H2A0.8600C10—C111.376 (3)
O1—C91.239 (3)C10—S11.723 (2)
C2—C71.382 (3)C3—H3B0.9300
C2—C31.385 (3)C13—C121.349 (4)
C2—C11.442 (4)C13—S11.693 (3)
C9—C101.474 (3)C13—H13A0.9300
C4—C31.378 (3)C6—H6A0.9300
C4—C51.382 (3)C11—C121.405 (3)
C4—H4A0.9300C11—H11A0.9300
C8—C51.460 (3)C12—H12A0.9300
C8—H8A0.9300N1—C11.133 (3)
C8—N3—N2116.90 (18)C6—C5—C8120.8 (2)
C9—N2—N3122.15 (18)C11—C10—C9121.4 (2)
C9—N2—H2A118.9C11—C10—S1110.98 (16)
N3—N2—H2A118.9C9—C10—S1127.61 (19)
C7—C2—C3119.9 (2)C4—C3—C2119.9 (2)
C7—C2—C1119.9 (2)C4—C3—H3B120.1
C3—C2—C1120.2 (2)C2—C3—H3B120.1
O1—C9—N2119.03 (19)C12—C13—S1112.96 (18)
O1—C9—C10119.6 (2)C12—C13—H13A123.5
N2—C9—C10121.3 (2)S1—C13—H13A123.5
C3—C4—C5120.6 (2)C7—C6—C5120.1 (2)
C3—C4—H4A119.7C7—C6—H6A119.9
C5—C4—H4A119.7C5—C6—H6A119.9
N3—C8—C5120.9 (2)C10—C11—C12112.2 (2)
N3—C8—H8A119.6C10—C11—H11A123.9
C5—C8—H8A119.6C12—C11—H11A123.9
C6—C7—C2120.1 (2)C13—C12—C11112.5 (3)
C6—C7—H7A119.9C13—C12—H12A123.7
C2—C7—H7A119.9C11—C12—H12A123.7
C4—C5—C6119.2 (2)C13—S1—C1091.29 (13)
C4—C5—C8120.0 (2)N1—C1—C2177.8 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O1i0.861.972.821 (2)171
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O1i0.861.972.821 (2)171

Symmetry code: (i) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N'-(4-Bromo-benzyl-idene)thio-phene-2-carbohydrazide.

Authors:  Jin-He Jiang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-27
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1.  N'-(4-Cyano-benzyl-idene)furan-2-carbohydrazide monohydrate.

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