Literature DB >> 21579412

N,N'-Bis(4-fluoro-phen-yl)urea.

Wan-Sin Loh, Hoong-Kun Fun, S Sarveswari, V Vijayakumar, R Venkat Ragavan.   

Abstract

The asymmetric unit of the title compound, C(13)H(10)F(2)N(2)O, contains one and a half N,N'-bis-(4-fluoro-phen-yl)urea mol-ecules. One of the mol-ecules has crystallographic twofold rotation symmetry. The benzene rings are twisted from each other by dihedral angles of 29.69 (6)° for the mol-ecule in a general position and 89.83 (6)° for the symmetry-generated mol-ecule. In the crystal structure, a pair of inter-molecular N-H⋯O hydrogen bonds link symmetry-related mol-ecules into chains along the b axis, forming R(2) (1)(6) ring motifs.

Entities:  

Year:  2010        PMID: 21579412      PMCID: PMC2979587          DOI: 10.1107/S1600536810016399

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to and the biological activity of bis-aryl­ureas, see: Khire et al. (2004 ▶); McDonnell et al. (2008 ▶); Francisco et al. (2004 ▶); Bigi et al. (1998 ▶). For the synthetic method, see: Sarveswari & Raja (2006 ▶). For a related structure, see: Jai-nhuknan et al. (1997 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C13H10F2N2O M = 248.23 Monoclinic, a = 67.541 (4) Å b = 4.5750 (3) Å c = 10.7098 (6) Å β = 95.969 (2)° V = 3291.4 (3) Å3 Z = 12 Mo Kα radiation μ = 0.12 mm−1 T = 100 K 0.59 × 0.12 × 0.09 mm

Data collection

Bruker APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.932, T max = 0.990 21915 measured reflections 5986 independent reflections 4304 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.159 S = 1.05 5986 reflections 257 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.69 e Å−3 Δρmin = −0.51 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810016399/lh5040sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810016399/lh5040Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H10F2N2OF(000) = 1536
Mr = 248.23Dx = 1.503 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3635 reflections
a = 67.541 (4) Åθ = 2.4–32.1°
b = 4.5750 (3) ŵ = 0.12 mm1
c = 10.7098 (6) ÅT = 100 K
β = 95.969 (2)°Block, brown
V = 3291.4 (3) Å30.59 × 0.12 × 0.09 mm
Z = 12
Bruker APEXII DUO CCD area-detector diffractometer5986 independent reflections
Radiation source: fine-focus sealed tube4304 reflections with I > 2σ(I)
graphiteRint = 0.050
φ and ω scansθmax = 32.7°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −102→102
Tmin = 0.932, Tmax = 0.990k = −6→6
21915 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.159H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0899P)2 + 0.1948P] where P = (Fo2 + 2Fc2)/3
5986 reflections(Δ/σ)max < 0.001
257 parametersΔρmax = 0.69 e Å3
0 restraintsΔρmin = −0.51 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F1A0.244179 (12)0.5229 (2)0.33663 (8)0.02522 (19)
O1A0.167883 (13)0.5447 (2)0.62122 (9)0.0198 (2)
N1A0.180685 (15)0.9777 (2)0.55991 (10)0.0162 (2)
N2A0.153498 (15)0.9743 (3)0.67129 (11)0.0175 (2)
C1A0.209007 (17)0.6417 (3)0.56407 (11)0.0163 (2)
H1AA0.20640.57460.64260.020*
C2A0.225076 (17)0.5295 (3)0.50863 (12)0.0180 (2)
H2AA0.23320.38600.54860.022*
C3A0.228714 (17)0.6362 (3)0.39263 (12)0.0178 (2)
C4A0.217243 (18)0.8517 (3)0.33077 (11)0.0184 (2)
H4AA0.22030.92360.25390.022*
C5A0.200924 (18)0.9591 (3)0.38612 (11)0.0172 (2)
H5AA0.19281.10080.34510.021*
C6A0.196784 (16)0.8543 (3)0.50280 (10)0.0142 (2)
C7A0.167422 (16)0.8158 (3)0.61783 (11)0.0150 (2)
C8A0.138631 (16)0.8455 (3)0.73842 (11)0.0154 (2)
C9A0.143599 (18)0.6409 (3)0.83227 (12)0.0187 (2)
H9AA0.15680.58380.85080.022*
C10A0.128905 (18)0.5208 (3)0.89873 (12)0.0207 (3)
H10A0.13200.38180.96100.025*
C11A0.109514 (19)0.6143 (3)0.86946 (12)0.0209 (3)
C12A0.104185 (18)0.8202 (3)0.77910 (12)0.0219 (3)
H12A0.09100.88090.76300.026*
C13A0.118945 (18)0.9362 (3)0.71211 (12)0.0193 (2)
H13A0.11571.07450.64970.023*
F2A0.095139 (12)0.4948 (2)0.93363 (9)0.0309 (2)
F1B0.072613 (12)0.6424 (2)1.16351 (8)0.0289 (2)
O1B0.00000.6661 (3)0.75000.0262 (3)
N1B0.013863 (16)1.0982 (3)0.82126 (11)0.0193 (2)
C1B0.024299 (18)0.7613 (3)0.99248 (12)0.0200 (2)
H1BA0.01120.69610.99190.024*
C2B0.03907 (2)0.6455 (3)1.07851 (12)0.0213 (3)
H2BA0.03620.49981.13430.026*
C3B0.058161 (18)0.7529 (3)1.07883 (12)0.0210 (3)
C4B0.063141 (18)0.9679 (3)0.99790 (12)0.0212 (3)
H4BA0.07611.03851.00180.025*
C5B0.048369 (18)1.0776 (3)0.91008 (12)0.0194 (2)
H5BA0.05151.22000.85330.023*
C6B0.028914 (17)0.9741 (3)0.90722 (12)0.0170 (2)
C7B0.00000.9380 (4)0.75000.0181 (3)
H1NA0.1792 (3)1.157 (5)0.5567 (17)0.028 (5)*
H1NB0.0136 (3)1.289 (6)0.8078 (19)0.043 (6)*
H2NA0.1535 (2)1.160 (4)0.6624 (16)0.022 (4)*
U11U22U33U12U13U23
F1A0.0210 (3)0.0251 (5)0.0312 (4)0.0051 (3)0.0105 (3)−0.0019 (4)
O1A0.0215 (4)0.0090 (4)0.0302 (5)−0.0003 (3)0.0084 (3)−0.0003 (4)
N1A0.0180 (4)0.0082 (5)0.0231 (5)0.0010 (4)0.0059 (4)0.0014 (4)
N2A0.0184 (4)0.0094 (5)0.0258 (5)0.0014 (4)0.0076 (4)0.0010 (4)
C1A0.0170 (5)0.0144 (6)0.0175 (5)0.0004 (4)0.0018 (4)0.0011 (4)
C2A0.0159 (5)0.0147 (6)0.0232 (6)0.0025 (4)0.0015 (4)0.0012 (5)
C3A0.0148 (5)0.0171 (6)0.0220 (5)0.0005 (4)0.0040 (4)−0.0041 (5)
C4A0.0195 (5)0.0187 (6)0.0174 (5)−0.0004 (5)0.0046 (4)0.0001 (5)
C5A0.0183 (5)0.0151 (6)0.0181 (5)0.0007 (5)0.0021 (4)0.0006 (4)
C6A0.0150 (4)0.0106 (5)0.0170 (5)−0.0005 (4)0.0017 (4)−0.0015 (4)
C7A0.0153 (4)0.0119 (5)0.0178 (5)0.0006 (4)0.0015 (4)−0.0001 (4)
C8A0.0157 (4)0.0114 (5)0.0195 (5)−0.0011 (4)0.0039 (4)−0.0013 (4)
C9A0.0178 (5)0.0176 (6)0.0205 (5)−0.0003 (5)0.0016 (4)0.0011 (5)
C10A0.0212 (5)0.0207 (7)0.0205 (6)0.0006 (5)0.0039 (4)0.0035 (5)
C11A0.0201 (5)0.0200 (6)0.0239 (6)−0.0038 (5)0.0078 (4)−0.0015 (5)
C12A0.0161 (5)0.0215 (7)0.0286 (6)0.0010 (5)0.0044 (4)0.0005 (5)
C13A0.0174 (5)0.0168 (6)0.0238 (6)0.0019 (5)0.0030 (4)0.0020 (5)
F2A0.0247 (4)0.0319 (5)0.0384 (5)−0.0037 (4)0.0150 (3)0.0060 (4)
F1B0.0284 (4)0.0301 (5)0.0263 (4)0.0062 (4)−0.0060 (3)0.0031 (4)
O1B0.0302 (7)0.0107 (6)0.0351 (7)0.000−0.0093 (6)0.000
N1B0.0177 (4)0.0112 (5)0.0280 (5)−0.0008 (4)−0.0017 (4)0.0004 (4)
C1B0.0194 (5)0.0172 (6)0.0235 (6)−0.0020 (5)0.0031 (4)−0.0001 (5)
C2B0.0275 (6)0.0165 (6)0.0200 (5)−0.0009 (5)0.0029 (4)0.0015 (5)
C3B0.0216 (5)0.0203 (6)0.0201 (5)0.0039 (5)−0.0024 (4)−0.0008 (5)
C4B0.0168 (5)0.0223 (7)0.0244 (6)−0.0004 (5)0.0011 (4)−0.0012 (5)
C5B0.0184 (5)0.0180 (6)0.0218 (5)−0.0010 (5)0.0022 (4)0.0007 (5)
C6B0.0171 (5)0.0123 (6)0.0213 (5)0.0007 (4)0.0010 (4)−0.0016 (4)
C7B0.0170 (7)0.0136 (8)0.0234 (8)0.0000.0005 (6)0.000
F1A—C3A1.3601 (13)C10A—H10A0.9300
O1A—C7A1.2412 (15)C11A—F2A1.3611 (14)
N1A—C7A1.3606 (15)C11A—C12A1.371 (2)
N1A—C6A1.4190 (15)C12A—C13A1.3925 (17)
N1A—H1NA0.83 (2)C12A—H12A0.9300
N2A—C7A1.3602 (15)C13A—H13A0.9300
N2A—C8A1.4223 (15)F1B—C3B1.3589 (15)
N2A—H2NA0.85 (2)O1B—C7B1.244 (2)
C1A—C2A1.3886 (16)N1B—C7B1.3593 (15)
C1A—C6A1.3948 (17)N1B—C6B1.4173 (16)
C1A—H1AA0.9300N1B—H1NB0.88 (3)
C2A—C3A1.3805 (18)C1B—C2B1.3902 (18)
C2A—H2AA0.9300C1B—C6B1.3921 (18)
C3A—C4A1.3799 (18)C1B—H1BA0.9300
C4A—C5A1.3941 (16)C2B—C3B1.3798 (19)
C4A—H4AA0.9300C2B—H2BA0.9300
C5A—C6A1.3937 (16)C3B—C4B1.376 (2)
C5A—H5AA0.9300C4B—C5B1.3916 (18)
C8A—C9A1.3888 (18)C4B—H4BA0.9300
C8A—C13A1.3935 (16)C5B—C6B1.3942 (17)
C9A—C10A1.3929 (17)C5B—H5BA0.9300
C9A—H9AA0.9300C7B—N1Bi1.3593 (15)
C10A—C11A1.3824 (18)
C7A—N1A—C6A123.39 (11)C9A—C10A—H10A121.0
C7A—N1A—H1NA118.3 (13)F2A—C11A—C12A118.92 (12)
C6A—N1A—H1NA118.3 (13)F2A—C11A—C10A118.03 (12)
C7A—N2A—C8A123.17 (11)C12A—C11A—C10A123.05 (12)
C7A—N2A—H2NA118.4 (11)C11A—C12A—C13A118.42 (12)
C8A—N2A—H2NA118.4 (11)C11A—C12A—H12A120.8
C2A—C1A—C6A120.49 (11)C13A—C12A—H12A120.8
C2A—C1A—H1AA119.8C12A—C13A—C8A120.09 (12)
C6A—C1A—H1AA119.8C12A—C13A—H13A120.0
C3A—C2A—C1A118.30 (11)C8A—C13A—H13A120.0
C3A—C2A—H2AA120.8C7B—N1B—C6B123.66 (12)
C1A—C2A—H2AA120.8C7B—N1B—H1NB116.0 (14)
F1A—C3A—C4A118.63 (11)C6B—N1B—H1NB120.2 (14)
F1A—C3A—C2A118.60 (11)C2B—C1B—C6B120.46 (11)
C4A—C3A—C2A122.77 (11)C2B—C1B—H1BA119.8
C3A—C4A—C5A118.48 (11)C6B—C1B—H1BA119.8
C3A—C4A—H4AA120.8C3B—C2B—C1B118.17 (13)
C5A—C4A—H4AA120.8C3B—C2B—H2BA120.9
C6A—C5A—C4A120.08 (12)C1B—C2B—H2BA120.9
C6A—C5A—H5AA120.0F1B—C3B—C4B118.73 (12)
C4A—C5A—H5AA120.0F1B—C3B—C2B118.40 (13)
C5A—C6A—C1A119.84 (11)C4B—C3B—C2B122.87 (12)
C5A—C6A—N1A118.94 (11)C3B—C4B—C5B118.59 (12)
C1A—C6A—N1A121.14 (10)C3B—C4B—H4BA120.7
O1A—C7A—N2A122.47 (11)C5B—C4B—H4BA120.7
O1A—C7A—N1A122.79 (11)C4B—C5B—C6B120.01 (13)
N2A—C7A—N1A114.74 (11)C4B—C5B—H5BA120.0
C9A—C8A—C13A120.06 (11)C6B—C5B—H5BA120.0
C9A—C8A—N2A121.00 (10)C1B—C6B—C5B119.87 (12)
C13A—C8A—N2A118.90 (11)C1B—C6B—N1B120.79 (11)
C8A—C9A—C10A120.28 (11)C5B—C6B—N1B119.26 (12)
C8A—C9A—H9AA119.9O1B—C7B—N1Bi122.63 (9)
C10A—C9A—H9AA119.9O1B—C7B—N1B122.63 (8)
C11A—C10A—C9A118.08 (12)N1Bi—C7B—N1B114.74 (17)
C11A—C10A—H10A121.0
D—H···AD—HH···AD···AD—H···A
N1A—H1NA···O1Aii0.83 (2)2.08 (2)2.8331 (13)151.7 (18)
N1B—H1NB···O1Bii0.89 (3)2.02 (3)2.8392 (18)153.3 (19)
N2A—H2NA···O1Aii0.855 (18)2.080 (17)2.8547 (16)150.5 (13)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1A—H1NA⋯O1Ai0.83 (2)2.08 (2)2.8331 (13)151.7 (18)
N1B—H1NB⋯O1Bi0.89 (3)2.02 (3)2.8392 (18)153.3 (19)
N2A—H2NA⋯O1Ai0.855 (18)2.080 (17)2.8547 (16)150.5 (13)

Symmetry code: (i) .

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