| Literature DB >> 21579328 |
Zeid Abdellah Al Othman, Samah Toumi Akriche, Mohamed Rzaigui, Refaat Mohamed Mahfouz.
Abstract
In the title mol-ecular salt, (C(5)H(6)N(3)O(2))[ReO(4)], the cations and tetrahedral anions are linked by trifurcated N-H⋯(O,O,O) and bifurcated N-H⋯(O,O) hydrogen bonds, as well as weak C-H⋯O inter-actions. This results in alternating corrugated inorganic and organic layers in the crystal.Entities:
Year: 2010 PMID: 21579328 PMCID: PMC2979616 DOI: 10.1107/S160053681001812X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C5H6N3O2)[ReO4] | |
| Monoclinic, | Ag |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 9–11° | |
| µ = 6.86 mm−1 | |
| β = 117.52 (5)° | Prism, yellow |
| 0.50 × 0.40 × 0.30 mm | |
| Enraf–Nonius CAD-4 diffractometer | 3532 reflections with |
| Radiation source: Enraf–Nonius FR590 | |
| graphite | θmax = 28.0°, θmin = 2.4° |
| non–profiled ω scans | |
| Absorption correction: multi-scan (Blessing, 1995) | |
| 7565 measured reflections | 2 standard reflections every 120 min |
| 4682 independent reflections | intensity decay: 4% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.037 | |
| 4682 reflections | Δρmax = 2.71 e Å−3 |
| 137 parameters | Δρmin = −2.35 e Å−3 |
| 24 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.033 (2) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Re1 | 0.71309 (5) | 0.940210 (14) | 0.25037 (4) | 0.03320 (12) | |
| O1 | 0.5590 (13) | 0.9742 (3) | 0.3597 (10) | 0.0450 (14) | |
| O2 | 0.9536 (13) | 0.9832 (4) | 0.2759 (11) | 0.0544 (17) | |
| O3 | 0.8207 (16) | 0.8717 (4) | 0.3586 (14) | 0.062 (2) | |
| O4 | 0.5164 (14) | 0.9265 (4) | 0.0220 (10) | 0.0568 (19) | |
| O5 | 0.2048 (17) | 0.7952 (4) | 0.6686 (16) | 0.073 (2) | |
| O6 | 0.453 (2) | 0.7369 (5) | 0.8873 (17) | 0.088 (3) | |
| N1 | 0.7550 (13) | 0.9105 (4) | 0.7469 (10) | 0.0400 (14) | |
| H1 | 0.7366 | 0.9443 | 0.6867 | 0.048* | |
| N2 | 0.3526 (15) | 0.8922 (3) | 0.5588 (11) | 0.0427 (15) | |
| H2A | 0.3378 | 0.9264 | 0.5019 | 0.051* | |
| H2B | 0.2288 | 0.8690 | 0.5260 | 0.051* | |
| N3 | 0.4105 (19) | 0.7821 (4) | 0.7905 (14) | 0.053 (2) | |
| C1 | 0.5584 (15) | 0.8757 (3) | 0.6920 (11) | 0.0338 (13) | |
| C2 | 0.6059 (16) | 0.8218 (4) | 0.8141 (13) | 0.0386 (14) | |
| C3 | 0.8316 (19) | 0.8088 (4) | 0.9565 (15) | 0.050 (2) | |
| H3 | 0.8578 | 0.7733 | 1.0280 | 0.060* | |
| C4 | 1.0226 (19) | 0.8481 (6) | 0.9954 (18) | 0.058 (3) | |
| H4 | 1.1769 | 0.8402 | 1.0937 | 0.070* | |
| C5 | 0.9753 (18) | 0.8982 (5) | 0.8848 (15) | 0.050 (2) | |
| H5 | 1.1009 | 0.9248 | 0.9059 | 0.060* |
| Re1 | 0.03010 (15) | 0.03753 (17) | 0.03126 (16) | −0.00110 (11) | 0.01359 (11) | −0.00198 (11) |
| O1 | 0.057 (4) | 0.041 (3) | 0.045 (3) | −0.001 (3) | 0.030 (3) | −0.002 (3) |
| O2 | 0.040 (3) | 0.067 (5) | 0.055 (4) | −0.007 (3) | 0.022 (3) | 0.008 (3) |
| O3 | 0.062 (5) | 0.046 (4) | 0.076 (6) | 0.010 (3) | 0.030 (4) | 0.017 (4) |
| O4 | 0.044 (4) | 0.078 (5) | 0.039 (3) | 0.001 (3) | 0.012 (3) | −0.019 (3) |
| O5 | 0.057 (5) | 0.057 (5) | 0.090 (7) | −0.021 (4) | 0.021 (4) | 0.005 (5) |
| O6 | 0.090 (7) | 0.059 (6) | 0.103 (8) | −0.012 (5) | 0.034 (6) | 0.036 (5) |
| N1 | 0.041 (3) | 0.037 (3) | 0.046 (4) | −0.001 (2) | 0.023 (3) | 0.006 (3) |
| N2 | 0.046 (4) | 0.035 (3) | 0.037 (3) | −0.001 (3) | 0.010 (3) | 0.006 (3) |
| N3 | 0.064 (5) | 0.031 (3) | 0.064 (5) | −0.004 (3) | 0.029 (4) | 0.003 (3) |
| C1 | 0.039 (3) | 0.028 (3) | 0.034 (3) | −0.001 (2) | 0.017 (3) | −0.003 (2) |
| C2 | 0.044 (4) | 0.028 (3) | 0.046 (4) | 0.003 (3) | 0.023 (3) | 0.002 (3) |
| C3 | 0.054 (5) | 0.038 (4) | 0.057 (5) | 0.014 (3) | 0.024 (4) | 0.017 (4) |
| C4 | 0.041 (4) | 0.062 (6) | 0.066 (6) | 0.009 (4) | 0.021 (4) | 0.016 (5) |
| C5 | 0.040 (4) | 0.057 (5) | 0.052 (5) | −0.001 (4) | 0.020 (4) | 0.008 (4) |
| Re1—O1 | 1.726 (6) | C2—C3 | 1.363 (13) |
| Re1—O2 | 1.706 (7) | C2—N3 | 1.441 (12) |
| Re1—O3 | 1.708 (8) | C2—C1 | 1.466 (11) |
| Re1—O4 | 1.665 (7) | O5—N3 | 1.228 (14) |
| N1—C5 | 1.325 (12) | N3—O6 | 1.206 (12) |
| N1—C1 | 1.338 (11) | C3—C4 | 1.387 (16) |
| N1—H1 | 0.8600 | C3—H3 | 0.9300 |
| N2—C1 | 1.277 (11) | C5—C4 | 1.350 (15) |
| N2—H2A | 0.8600 | C5—H5 | 0.9300 |
| N2—H2B | 0.8600 | C4—H4 | 0.9300 |
| O4—Re1—O2 | 113.4 (4) | N2—C1—N1 | 121.7 (8) |
| O4—Re1—O3 | 107.4 (4) | N2—C1—C2 | 126.0 (8) |
| O2—Re1—O3 | 108.1 (4) | N1—C1—C2 | 112.1 (7) |
| O4—Re1—O1 | 108.1 (4) | C3—C2—N3 | 118.0 (8) |
| O2—Re1—O1 | 111.2 (4) | C3—C2—C1 | 121.8 (8) |
| O3—Re1—O1 | 108.5 (4) | N3—C2—C1 | 120.3 (8) |
| C5—N1—C1 | 126.5 (8) | C2—C3—C4 | 120.3 (9) |
| C5—N1—H1 | 116.8 | C2—C3—H3 | 119.9 |
| C1—N1—H1 | 116.8 | C4—C3—H3 | 119.9 |
| C1—N2—H2A | 120.0 | C5—C4—C3 | 117.3 (10) |
| C1—N2—H2B | 120.0 | C5—C4—H4 | 121.3 |
| H2A—N2—H2B | 120.0 | C3—C4—H4 | 121.3 |
| O6—N3—O5 | 122.0 (10) | N1—C5—C4 | 121.9 (10) |
| O6—N3—C2 | 119.7 (10) | N1—C5—H5 | 119.1 |
| O5—N3—C2 | 118.3 (8) | C4—C5—H5 | 119.1 |
| C3—C2—N3—O6 | −4.7 (15) | C2—C3—C4—C5 | −1.3 (17) |
| C1—C2—N3—O6 | 177.5 (10) | C5—N1—C1—N2 | 179.0 (9) |
| C3—C2—N3—O5 | 176.6 (10) | C5—N1—C1—C2 | 4.7 (12) |
| C1—C2—N3—O5 | −1.2 (14) | C3—C2—C1—N2 | −178.3 (9) |
| N3—C2—C3—C4 | −174.9 (10) | N3—C2—C1—N2 | −0.6 (13) |
| C1—C2—C3—C4 | 2.9 (15) | C3—C2—C1—N1 | −4.3 (12) |
| C1—N1—C5—C4 | −3.5 (17) | N3—C2—C1—N1 | 173.5 (8) |
| N1—C5—C4—C3 | 1.4 (18) |
| H··· | ||||
| N1—H1···O1 | 0.86 | 2.37 | 3.041 (10) | 135 |
| N1—H1···O2i | 0.86 | 2.42 | 3.018 (10) | 128 |
| N1—H1···O1ii | 0.86 | 2.48 | 3.077 (11) | 128 |
| N2—H2A···O1 | 0.86 | 2.38 | 3.036 (10) | 133 |
| N2—H2A···O1ii | 0.86 | 2.40 | 3.010 (10) | 129 |
| N2—H2A···O2iii | 0.86 | 2.55 | 3.168 (11) | 129 |
| N2—H2B···O5 | 0.86 | 2.02 | 2.624 (11) | 127 |
| N2—H2B···O3iii | 0.86 | 2.26 | 2.976 (12) | 141 |
| C3—H3···O5iv | 0.93 | 2.44 | 3.138 (12) | 132 |
| C5—H5···O4v | 0.93 | 2.32 | 3.094 (13) | 141 |
| C5—H5···O2i | 0.93 | 2.41 | 3.020 (13) | 123 |
Selected bond lengths (Å)
| Re1—O1 | 1.726 (6) |
| Re1—O2 | 1.706 (7) |
| Re1—O3 | 1.708 (8) |
| Re1—O4 | 1.665 (7) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1 | 0.86 | 2.37 | 3.041 (10) | 135 |
| N1—H1⋯O2i | 0.86 | 2.42 | 3.018 (10) | 128 |
| N1—H1⋯O1ii | 0.86 | 2.48 | 3.077 (11) | 128 |
| N2—H2 | 0.86 | 2.38 | 3.036 (10) | 133 |
| N2—H2 | 0.86 | 2.40 | 3.010 (10) | 129 |
| N2—H2 | 0.86 | 2.55 | 3.168 (11) | 129 |
| N2—H2 | 0.86 | 2.02 | 2.624 (11) | 127 |
| N2—H2 | 0.86 | 2.26 | 2.976 (12) | 141 |
| C3—H3⋯O5iv | 0.93 | 2.44 | 3.138 (12) | 132 |
| C5—H5⋯O4v | 0.93 | 2.32 | 3.094 (13) | 141 |
| C5—H5⋯O2i | 0.93 | 2.41 | 3.020 (13) | 123 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .