Literature DB >> 21578744

4-[(2,5-Dimethyl-anilino)acet-yl]-3,4-di-hydro-quinoxalin-2(1H)-one.

Waqar Nasir, Munawar Ali Munawar, Saeed Ahmad, Sohail Nadeem, Muhammad Shahid.   

Abstract

In the title compound, C(18)H(19)N(3)O(2), the dihedral angle between the benzene rings is 20.47 (10)° and an intra-molecular N-H⋯O hydrogen bond occurs, generating an S(5) ring. In the crystal, inversion dimers linked by pairs of N-H⋯O hydrogen bonds lead to R(2) (2)(8) loops.

Entities:  

Year:  2009        PMID: 21578744      PMCID: PMC2971779          DOI: 10.1107/S1600536809045991

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the biological activity of quinoxalines, see: Khan (2008 ▶); Miyashiro et al. (2009 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C18H19N3O2 M = 309.36 Triclinic, a = 5.3806 (2) Å b = 12.3580 (6) Å c = 13.2812 (6) Å α = 62.878 (2)° β = 84.135 (2)° γ = 80.835 (3)° V = 775.53 (6) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.38 × 0.17 × 0.06 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.967, T max = 0.995 16710 measured reflections 3803 independent reflections 2277 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.140 S = 1.02 3803 reflections 216 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809045991/hb5210sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045991/hb5210Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H19N3O2Z = 2
Mr = 309.36F(000) = 328
Triclinic, P1Dx = 1.325 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.3806 (2) ÅCell parameters from 3605 reflections
b = 12.3580 (6) Åθ = 3.1–25.1°
c = 13.2812 (6) ŵ = 0.09 mm1
α = 62.878 (2)°T = 296 K
β = 84.135 (2)°Chunk, colourless
γ = 80.835 (3)°0.38 × 0.17 × 0.06 mm
V = 775.53 (6) Å3
Bruker Kappa APEXII CCD diffractometer3803 independent reflections
Radiation source: fine-focus sealed tube2277 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 28.3°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −7→7
Tmin = 0.967, Tmax = 0.995k = −16→16
16710 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0583P)2 + 0.1485P] where P = (Fo2 + 2Fc2)/3
3803 reflections(Δ/σ)max < 0.001
216 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3267 (3)−0.03248 (15)0.21118 (13)0.0375 (4)
C20.2304 (3)−0.09075 (17)0.15875 (15)0.0474 (4)
H20.2528−0.06320.08090.057*
C30.1012 (4)−0.18983 (18)0.22234 (17)0.0565 (5)
H30.0350−0.22830.18700.068*
C40.0695 (4)−0.23204 (18)0.33759 (17)0.0595 (5)
H4−0.0191−0.29840.37980.071*
C50.1690 (3)−0.17607 (17)0.39049 (15)0.0527 (5)
H50.1486−0.20500.46850.063*
C60.2993 (3)−0.07679 (15)0.32755 (13)0.0402 (4)
C70.5923 (3)0.04788 (16)0.33477 (14)0.0432 (4)
C80.6625 (3)0.07691 (18)0.21398 (13)0.0478 (5)
H8A0.71480.15810.17600.057*
H8B0.80510.01900.21190.057*
C90.3822 (3)0.16519 (16)0.05055 (13)0.0394 (4)
C100.5334 (3)0.27254 (16)−0.00272 (13)0.0441 (4)
H10A0.51180.31700.04240.053*
H10B0.71100.2433−0.00600.053*
C110.5571 (3)0.45478 (16)−0.18728 (14)0.0446 (4)
C120.4976 (3)0.51241 (17)−0.30190 (15)0.0487 (4)
C130.6002 (4)0.61824 (19)−0.37152 (17)0.0605 (5)
H130.56290.6575−0.44780.073*
C140.7563 (4)0.66854 (19)−0.33251 (18)0.0630 (6)
H140.81780.7415−0.38190.076*
C150.8211 (3)0.61092 (17)−0.22080 (17)0.0521 (5)
C160.7209 (3)0.50364 (17)−0.14910 (15)0.0487 (4)
H160.76430.4633−0.07350.058*
C170.9978 (4)0.6614 (2)−0.1771 (2)0.0713 (6)
H17A0.94900.6454−0.10050.107*
H17B0.99070.7483−0.22350.107*
H17C1.16640.6229−0.17950.107*
C180.3267 (4)0.4598 (2)−0.34590 (16)0.0609 (5)
H18A0.39820.3782−0.33240.091*
H18B0.30800.5101−0.42570.091*
H18C0.16480.4573−0.30770.091*
N10.4033 (3)−0.02041 (14)0.38128 (12)0.0479 (4)
N20.4571 (2)0.07258 (12)0.15222 (11)0.0388 (3)
N30.4475 (3)0.35148 (15)−0.11433 (13)0.0580 (5)
O10.7078 (2)0.08343 (13)0.38634 (10)0.0589 (4)
O20.2018 (2)0.16278 (12)0.00335 (10)0.0550 (4)
H1N0.366 (4)−0.0432 (18)0.4561 (19)0.066*
H2N0.339 (4)0.3255 (19)−0.1377 (17)0.066*
U11U22U33U12U13U23
C10.0355 (8)0.0409 (9)0.0372 (9)−0.0074 (7)−0.0020 (6)−0.0174 (7)
C20.0535 (10)0.0532 (11)0.0437 (10)−0.0114 (8)−0.0022 (8)−0.0272 (9)
C30.0680 (12)0.0528 (11)0.0600 (12)−0.0194 (10)−0.0072 (9)−0.0305 (10)
C40.0696 (13)0.0527 (12)0.0557 (12)−0.0274 (10)−0.0070 (10)−0.0167 (10)
C50.0595 (11)0.0560 (12)0.0393 (10)−0.0209 (9)−0.0047 (8)−0.0137 (9)
C60.0400 (9)0.0454 (10)0.0383 (9)−0.0101 (7)−0.0055 (7)−0.0191 (8)
C70.0443 (9)0.0476 (10)0.0390 (9)−0.0101 (8)−0.0091 (7)−0.0175 (8)
C80.0396 (9)0.0648 (12)0.0395 (10)−0.0183 (8)−0.0044 (7)−0.0194 (9)
C90.0400 (9)0.0481 (10)0.0342 (9)−0.0092 (7)−0.0001 (7)−0.0211 (8)
C100.0457 (9)0.0514 (11)0.0371 (9)−0.0142 (8)−0.0029 (7)−0.0187 (8)
C110.0459 (10)0.0438 (10)0.0424 (10)−0.0066 (8)−0.0030 (7)−0.0173 (8)
C120.0508 (10)0.0496 (11)0.0418 (10)−0.0020 (8)−0.0040 (8)−0.0181 (8)
C130.0656 (13)0.0581 (12)0.0431 (11)−0.0049 (10)−0.0028 (9)−0.0106 (9)
C140.0669 (13)0.0493 (12)0.0608 (13)−0.0165 (10)0.0107 (10)−0.0142 (10)
C150.0487 (10)0.0501 (11)0.0614 (12)−0.0123 (8)0.0078 (9)−0.0284 (10)
C160.0520 (10)0.0515 (11)0.0437 (10)−0.0136 (9)−0.0019 (8)−0.0200 (9)
C170.0663 (13)0.0734 (15)0.0898 (17)−0.0316 (11)0.0121 (12)−0.0459 (13)
C180.0656 (12)0.0696 (14)0.0475 (11)−0.0066 (10)−0.0132 (9)−0.0247 (10)
N10.0548 (9)0.0629 (10)0.0327 (8)−0.0240 (8)0.0006 (6)−0.0224 (7)
N20.0381 (7)0.0471 (8)0.0331 (7)−0.0131 (6)−0.0024 (5)−0.0169 (6)
N30.0679 (11)0.0545 (10)0.0456 (9)−0.0250 (8)−0.0165 (8)−0.0090 (8)
O10.0667 (8)0.0757 (9)0.0453 (7)−0.0334 (7)−0.0050 (6)−0.0283 (7)
O20.0546 (7)0.0619 (8)0.0449 (7)−0.0206 (6)−0.0148 (6)−0.0140 (6)
C1—C61.385 (2)C10—H10A0.9700
C1—C21.386 (2)C10—H10B0.9700
C1—N21.4290 (19)C11—N31.383 (2)
C2—C31.380 (2)C11—C161.392 (2)
C2—H20.9300C11—C121.402 (2)
C3—C41.375 (3)C12—C131.376 (3)
C3—H30.9300C12—C181.502 (2)
C4—C51.377 (2)C13—C141.382 (3)
C4—H40.9300C13—H130.9300
C5—C61.384 (2)C14—C151.376 (3)
C5—H50.9300C14—H140.9300
C6—N11.402 (2)C15—C161.388 (2)
C7—O11.2233 (18)C15—C171.504 (3)
C7—N11.341 (2)C16—H160.9300
C7—C81.496 (2)C17—H17A0.9600
C8—N21.4632 (18)C17—H17B0.9600
C8—H8A0.9700C17—H17C0.9600
C8—H8B0.9700C18—H18A0.9600
C9—O21.2192 (17)C18—H18B0.9600
C9—N21.361 (2)C18—H18C0.9600
C9—C101.514 (2)N1—H1N0.91 (2)
C10—N31.429 (2)N3—H2N0.85 (2)
C6—C1—C2119.61 (15)C16—C11—C12119.56 (16)
C6—C1—N2116.51 (13)C13—C12—C11117.64 (17)
C2—C1—N2123.89 (15)C13—C12—C18121.72 (17)
C3—C2—C1119.81 (16)C11—C12—C18120.64 (16)
C3—C2—H2120.1C12—C13—C14122.58 (18)
C1—C2—H2120.1C12—C13—H13118.7
C4—C3—C2120.47 (16)C14—C13—H13118.7
C4—C3—H3119.8C15—C14—C13120.20 (18)
C2—C3—H3119.8C15—C14—H14119.9
C3—C4—C5120.01 (17)C13—C14—H14119.9
C3—C4—H4120.0C14—C15—C16118.20 (17)
C5—C4—H4120.0C14—C15—C17121.24 (18)
C4—C5—C6119.99 (17)C16—C15—C17120.56 (18)
C4—C5—H5120.0C15—C16—C11121.77 (17)
C6—C5—H5120.0C15—C16—H16119.1
C5—C6—C1120.08 (15)C11—C16—H16119.1
C5—C6—N1120.15 (15)C15—C17—H17A109.5
C1—C6—N1119.77 (14)C15—C17—H17B109.5
O1—C7—N1123.53 (16)H17A—C17—H17B109.5
O1—C7—C8120.51 (15)C15—C17—H17C109.5
N1—C7—C8115.94 (14)H17A—C17—H17C109.5
N2—C8—C7113.34 (13)H17B—C17—H17C109.5
N2—C8—H8A108.9C12—C18—H18A109.5
C7—C8—H8A108.9C12—C18—H18B109.5
N2—C8—H8B108.9H18A—C18—H18B109.5
C7—C8—H8B108.9C12—C18—H18C109.5
H8A—C8—H8B107.7H18A—C18—H18C109.5
O2—C9—N2122.03 (15)H18B—C18—H18C109.5
O2—C9—C10120.83 (15)C7—N1—C6122.90 (15)
N2—C9—C10117.14 (13)C7—N1—H1N116.9 (12)
N3—C10—C9108.72 (12)C6—N1—H1N118.9 (12)
N3—C10—H10A109.9C9—N2—C1122.08 (12)
C9—C10—H10A109.9C9—N2—C8123.03 (13)
N3—C10—H10B109.9C1—N2—C8114.71 (13)
C9—C10—H10B109.9C11—N3—C10122.78 (14)
H10A—C10—H10B108.3C11—N3—H2N120.7 (14)
N3—C11—C16121.54 (16)C10—N3—H2N115.9 (14)
N3—C11—C12118.89 (16)
C6—C1—C2—C32.1 (3)C13—C14—C15—C17177.88 (19)
N2—C1—C2—C3−178.28 (16)C14—C15—C16—C11−0.6 (3)
C1—C2—C3—C4−0.7 (3)C17—C15—C16—C11−179.95 (17)
C2—C3—C4—C5−0.6 (3)N3—C11—C16—C15−176.58 (18)
C3—C4—C5—C60.5 (3)C12—C11—C16—C152.3 (3)
C4—C5—C6—C10.9 (3)O1—C7—N1—C6−169.54 (17)
C4—C5—C6—N1−179.29 (17)C8—C7—N1—C68.9 (3)
C2—C1—C6—C5−2.2 (3)C5—C6—N1—C7158.51 (17)
N2—C1—C6—C5178.14 (15)C1—C6—N1—C7−21.7 (3)
C2—C1—C6—N1178.03 (16)O2—C9—N2—C1−1.1 (3)
N2—C1—C6—N1−1.6 (2)C10—C9—N2—C1179.09 (14)
O1—C7—C8—N2−157.17 (17)O2—C9—N2—C8−175.90 (16)
N1—C7—C8—N224.4 (2)C10—C9—N2—C84.3 (2)
O2—C9—C10—N3−7.3 (2)C6—C1—N2—C9−140.30 (16)
N2—C9—C10—N3172.49 (15)C2—C1—N2—C940.0 (2)
N3—C11—C12—C13177.03 (18)C6—C1—N2—C834.9 (2)
C16—C11—C12—C13−1.9 (3)C2—C1—N2—C8−144.75 (17)
N3—C11—C12—C18−2.7 (3)C7—C8—N2—C9129.03 (17)
C16—C11—C12—C18178.41 (17)C7—C8—N2—C1−46.1 (2)
C11—C12—C13—C14−0.2 (3)C16—C11—N3—C10−14.3 (3)
C18—C12—C13—C14179.55 (19)C12—C11—N3—C10166.82 (18)
C12—C13—C14—C151.9 (3)C9—C10—N3—C11−176.65 (17)
C13—C14—C15—C16−1.5 (3)
D—H···AD—HH···AD···AD—H···A
N3—H2N···O20.85 (2)2.20 (2)2.620 (2)110.0 (16)
N1—H1N···O1i0.91 (2)1.93 (2)2.8405 (19)176.9 (18)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H2N⋯O20.85 (2)2.20 (2)2.620 (2)110.0 (16)
N1—H1N⋯O1i 0.91 (2)1.93 (2)2.8405 (19)176.9 (18)

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, characterization and in vitro antibacterial activity of new steroidal 5-en-3-oxazolo and thiazoloquinoxaline.

Authors:  Salman A Khan
Journal:  Eur J Med Chem       Date:  2007-12-23       Impact factor: 6.514

3.  Synthesis and SAR of novel tricyclic quinoxalinone inhibitors of poly(ADP-ribose)polymerase-1 (PARP-1).

Authors:  Julie Miyashiro; Keith W Woods; Chang H Park; Xuesong Liu; Yan Shi; Eric F Johnson; Jennifer J Bouska; Amanda M Olson; Yan Luo; Elizabeth H Fry; Vincent L Giranda; Thomas D Penning
Journal:  Bioorg Med Chem Lett       Date:  2009-06-13       Impact factor: 2.823

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  1 in total

1.  4-[2-(Benzyl-sulfan-yl)acet-yl]-3,4-dihydro-quinoxalin-2(1H)-one.

Authors:  Waqar Nasir; Munawar Ali Munawar; Sohail Nadeem; Rana Amjad; Ahmad Adnan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-12
  1 in total

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