Literature DB >> 21578573

Bis(tripyrazol-1-ylmethane)nickel(II) tetra-cyanidonickelate(II) dihydrate.

Ganna Lyubartseva, Sean Parkin.   

Abstract

The title complex, [Ni(C(10)H(10)N(6))(2)][Ni(CN)(4)]·2H(2)O, contains an octa-hedral nickel(II) cation and a square-planar nickel(II) anion. Both the cation and the anion reside on a crystallographic center of inversion. The Ni(II) center in the cation is coordinated by six pyrazol-1-yl rings of two chelating tripyrazol-1-ylmethane [HC(pz)(3)] ligands, with Ni-N distances that range between 2.0647 (19) and 2.0828 (19) Å. The Ni(II) center in the anion is coordinated by four cyanide ligands, with Ni-C distances in the range 1.869 (2)-1.869 (3) Å. The [Ni(CN)(4)](2-) anions are linked by inversion-related water mol-ecules into extended chains that run parallel to the a axis.

Entities:  

Year:  2009        PMID: 21578573      PMCID: PMC2971905          DOI: 10.1107/S1600536809046108

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the ligand synthesis, see: Reger et al. (2000 ▶). For allowed and forbidden d–d transitions in poly(3,5-dimethyl­pyrazol­yl)methane complexes of nickel(II), see: Nolet et al. (2006 ▶). For coupled electron-transfer and spin-exchange reactions of metal-bis­[tris­(pyrazol­yl)methane] complexes, see: Sheets & Schultz (2004 ▶). For structural, spectroscopic and angular-overlap studies of tris­(pyrazol-1-yl)methane complexes, see: Astley et al. (1993 ▶). For nickel(II) complexes of some poly(1-pyrazol­yl)alkane ligands, see: Mesubi & Ekemenzie (1984 ▶). For the coordination chemistry of geminal poly(1-pyrazol­yl)alkanes, see: Trofimenko et al. (1970 ▶).

Experimental

Crystal data

[Ni(C10H10N6)2][Ni(CN)4]·2H2O M = 686.01 Triclinic, a = 8.4840 (2) Å b = 8.7355 (2) Å c = 10.7522 (3) Å α = 75.5129 (11)° β = 75.2713 (12)° γ = 89.2534 (12)° V = 745.09 (3) Å3 Z = 1 Mo Kα radiation μ = 1.32 mm−1 T = 90 K 0.24 × 0.21 × 0.20 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.743, T max = 0.779 13964 measured reflections 3404 independent reflections 2664 reflections with I > 2σ(I) R int = 0.063

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.108 S = 1.08 3404 reflections 209 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.70 e Å−3 Δρmin = −0.80 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97 and local procedures. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809046108/om2294sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809046108/om2294Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C10H10N6)2][Ni(CN)4]·2H2OZ = 1
Mr = 686.01F(000) = 352
Triclinic, P1Dx = 1.529 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.4840 (2) ÅCell parameters from 3304 reflections
b = 8.7355 (2) Åθ = 1.0–27.5°
c = 10.7522 (3) ŵ = 1.32 mm1
α = 75.5129 (11)°T = 90 K
β = 75.2713 (12)°Block, pink
γ = 89.2534 (12)°0.24 × 0.21 × 0.20 mm
V = 745.09 (3) Å3
Nonius KappaCCD diffractometer3404 independent reflections
Radiation source: fine-focus sealed tube2664 reflections with I > 2σ(I)
graphiteRint = 0.063
Detector resolution: 9.1 pixels mm-1θmax = 27.5°, θmin = 2.0°
ω scans at fixed χ = 55°h = −10→11
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997)k = −11→11
Tmin = 0.743, Tmax = 0.779l = −13→13
13964 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.108H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0568P)2 + 0.2597P] where P = (Fo2 + 2Fc2)/3
3404 reflections(Δ/σ)max < 0.001
209 parametersΔρmax = 0.70 e Å3
3 restraintsΔρmin = −0.80 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.Three restraints (DFIX in SHELXL97) were used to ensure the geometry of the water molecule remained chemically reasonable.
xyzUiso*/Ueq
Ni10.50000.50001.00000.01475 (13)
N10.7163 (2)0.4988 (2)0.85558 (19)0.0177 (4)
C10.8185 (3)0.3933 (3)0.8155 (2)0.0218 (5)
H10.80230.28210.85200.026*
N20.7864 (2)0.6416 (2)0.77724 (18)0.0165 (4)
C20.9533 (3)0.4679 (3)0.7125 (2)0.0236 (5)
H21.04230.41850.66730.028*
N30.6175 (2)0.6834 (2)1.03923 (19)0.0191 (4)
C30.9294 (3)0.6262 (3)0.6912 (2)0.0204 (5)
H30.99960.70950.62810.024*
N40.7081 (2)0.7950 (2)0.93389 (19)0.0179 (4)
C40.6513 (3)0.7139 (3)1.1448 (2)0.0231 (5)
H40.60500.65541.23390.028*
N50.5640 (2)0.3277 (2)1.14631 (19)0.0193 (4)
C50.7636 (3)0.8429 (3)1.1081 (3)0.0272 (6)
H50.80650.88731.16550.033*
N60.4508 (2)0.2078 (2)1.21934 (19)0.0184 (4)
C60.7992 (3)0.8923 (3)0.9720 (3)0.0237 (5)
H60.87260.97750.91590.028*
C70.5121 (3)0.0982 (3)1.3053 (2)0.0214 (5)
H70.45600.00501.36610.026*
C80.6700 (3)0.1472 (3)1.2881 (2)0.0233 (5)
H80.74580.09541.33390.028*
C90.6972 (3)0.2894 (3)1.1892 (2)0.0214 (5)
H90.79750.35101.15670.026*
C100.7123 (3)0.7855 (3)0.7998 (2)0.0177 (5)
H100.78060.87790.73480.021*
Ni20.50000.50000.50000.01604 (13)
N70.7352 (2)0.7733 (3)0.4652 (2)0.0219 (5)
N80.2614 (3)0.7476 (3)0.4345 (2)0.0258 (5)
C110.6471 (3)0.6668 (3)0.4813 (2)0.0193 (5)
C120.3489 (3)0.6500 (3)0.4610 (2)0.0190 (5)
O1W0.0369 (2)0.9370 (2)0.32515 (19)0.0279 (4)
H1W0.101 (3)0.877 (3)0.358 (3)0.042*
H2W−0.053 (3)0.894 (3)0.369 (3)0.042*
U11U22U33U12U13U23
Ni10.0122 (2)0.0154 (2)0.0150 (2)−0.00204 (16)−0.00209 (16)−0.00215 (16)
N10.0165 (10)0.0172 (9)0.0178 (10)−0.0021 (8)−0.0031 (8)−0.0027 (8)
C10.0178 (12)0.0212 (12)0.0275 (13)0.0020 (10)−0.0064 (10)−0.0076 (10)
N20.0144 (10)0.0186 (10)0.0156 (9)−0.0024 (8)−0.0028 (8)−0.0037 (7)
C20.0162 (12)0.0310 (14)0.0243 (13)0.0041 (10)−0.0030 (10)−0.0109 (11)
N30.0175 (10)0.0191 (10)0.0173 (10)−0.0041 (8)−0.0019 (8)−0.0011 (8)
C30.0130 (12)0.0304 (13)0.0165 (11)−0.0032 (10)−0.0014 (9)−0.0058 (10)
N40.0171 (10)0.0172 (10)0.0166 (10)−0.0055 (8)0.0003 (8)−0.0040 (8)
C40.0246 (13)0.0272 (13)0.0172 (12)−0.0033 (10)−0.0030 (10)−0.0075 (10)
N50.0145 (10)0.0209 (10)0.0193 (10)−0.0014 (8)−0.0023 (8)−0.0017 (8)
C50.0284 (15)0.0304 (14)0.0254 (13)−0.0048 (11)−0.0066 (11)−0.0120 (11)
N60.0187 (10)0.0177 (10)0.0167 (10)−0.0013 (8)−0.0029 (8)−0.0022 (8)
C60.0232 (14)0.0200 (12)0.0270 (13)−0.0057 (10)−0.0039 (10)−0.0065 (10)
C70.0282 (14)0.0175 (11)0.0170 (12)0.0033 (10)−0.0050 (10)−0.0025 (9)
C80.0221 (13)0.0233 (12)0.0263 (13)0.0059 (10)−0.0089 (10)−0.0070 (10)
C90.0167 (12)0.0246 (12)0.0245 (13)0.0029 (10)−0.0072 (10)−0.0076 (10)
C100.0160 (12)0.0187 (11)0.0162 (11)−0.0012 (9)−0.0023 (9)−0.0020 (9)
Ni20.0109 (2)0.0195 (2)0.0168 (2)−0.00070 (16)−0.00297 (16)−0.00337 (16)
N70.0150 (10)0.0243 (11)0.0240 (11)−0.0005 (9)−0.0023 (8)−0.0046 (9)
N80.0160 (11)0.0288 (12)0.0312 (12)−0.0002 (9)−0.0060 (9)−0.0053 (9)
C110.0143 (12)0.0240 (12)0.0181 (12)0.0038 (10)−0.0053 (9)−0.0019 (9)
C120.0137 (12)0.0244 (12)0.0180 (12)−0.0038 (10)−0.0026 (9)−0.0051 (9)
O1W0.0168 (9)0.0253 (10)0.0340 (11)−0.0026 (8)−0.0064 (8)0.0060 (8)
Ni1—N52.0647 (19)N5—N61.367 (3)
Ni1—N5i2.0647 (19)C5—C61.372 (4)
Ni1—N32.081 (2)C5—H50.9500
Ni1—N3i2.081 (2)N6—C71.353 (3)
Ni1—N12.0828 (19)N6—C10i1.448 (3)
Ni1—N1i2.0828 (19)C6—H60.9500
N1—C11.332 (3)C7—C81.364 (4)
N1—N21.363 (3)C7—H70.9500
C1—C21.405 (3)C8—C91.396 (3)
C1—H10.9500C8—H80.9500
N2—C31.354 (3)C9—H90.9500
N2—C101.446 (3)C10—N6i1.448 (3)
C2—C31.365 (3)C10—H101.0000
C2—H20.9500Ni2—C12ii1.869 (2)
N3—C41.326 (3)Ni2—C121.869 (2)
N3—N41.360 (3)Ni2—C111.869 (3)
C3—H30.9500Ni2—C11ii1.869 (3)
N4—C61.356 (3)N7—C111.151 (3)
N4—C101.457 (3)N8—C121.153 (3)
C4—C51.396 (4)O1W—H1W0.83 (2)
C4—H40.9500O1W—H2W0.83 (2)
N5—C91.334 (3)
N5—Ni1—N5i180.00 (10)C5—C4—H4124.3
N5—Ni1—N393.82 (8)C9—N5—N6104.52 (18)
N5i—Ni1—N386.18 (8)C9—N5—Ni1137.45 (17)
N5—Ni1—N3i86.18 (8)N6—N5—Ni1117.85 (14)
N5i—Ni1—N3i93.82 (8)C6—C5—C4105.8 (2)
N3—Ni1—N3i179.999 (1)C6—C5—H5127.1
N5—Ni1—N194.89 (8)C4—C5—H5127.1
N5i—Ni1—N185.12 (8)C7—N6—N5111.63 (19)
N3—Ni1—N185.04 (8)C7—N6—C10i129.2 (2)
N3i—Ni1—N194.96 (8)N5—N6—C10i119.13 (18)
N5—Ni1—N1i85.11 (8)N4—C6—C5106.1 (2)
N5i—Ni1—N1i94.88 (8)N4—C6—H6127.0
N3—Ni1—N1i94.96 (8)C5—C6—H6127.0
N3i—Ni1—N1i85.04 (8)N6—C7—C8106.9 (2)
N1—Ni1—N1i180.00 (8)N6—C7—H7126.6
C1—N1—N2104.50 (19)C8—C7—H7126.6
C1—N1—Ni1138.05 (17)C7—C8—C9105.7 (2)
N2—N1—Ni1117.40 (14)C7—C8—H8127.1
N1—C1—C2111.3 (2)C9—C8—H8127.1
N1—C1—H1124.4N5—C9—C8111.2 (2)
C2—C1—H1124.4N5—C9—H9124.4
C3—N2—N1112.04 (19)C8—C9—H9124.4
C3—N2—C10128.24 (19)N2—C10—N6i111.23 (19)
N1—N2—C10119.54 (18)N2—C10—N4109.41 (18)
C3—C2—C1105.5 (2)N6i—C10—N4110.33 (18)
C3—C2—H2127.3N2—C10—H10108.6
C1—C2—H2127.3N6i—C10—H10108.6
C4—N3—N4104.74 (19)N4—C10—H10108.6
C4—N3—Ni1136.46 (17)C12ii—Ni2—C12179.999 (1)
N4—N3—Ni1117.88 (15)C12ii—Ni2—C1191.72 (10)
N2—C3—C2106.7 (2)C12—Ni2—C1188.28 (10)
N2—C3—H3126.6C12ii—Ni2—C11ii88.28 (10)
C2—C3—H3126.6C12—Ni2—C11ii91.72 (10)
C6—N4—N3112.08 (19)C11—Ni2—C11ii179.999 (1)
C6—N4—C10128.5 (2)N7—C11—Ni2177.0 (2)
N3—N4—C10118.97 (19)N8—C12—Ni2176.9 (2)
N3—C4—C5111.3 (2)H1W—O1W—H2W103 (2)
N3—C4—H4124.3
N5—Ni1—N1—C139.3 (3)Ni1—N3—C4—C5167.67 (19)
N5i—Ni1—N1—C1−140.7 (3)N3—Ni1—N5—C9−44.9 (3)
N3—Ni1—N1—C1132.7 (3)N3i—Ni1—N5—C9135.1 (3)
N3i—Ni1—N1—C1−47.3 (3)N1—Ni1—N5—C940.5 (3)
N5—Ni1—N1—N2−137.72 (16)N1i—Ni1—N5—C9−139.5 (3)
N5i—Ni1—N1—N242.28 (16)N3—Ni1—N5—N6140.99 (16)
N3—Ni1—N1—N2−44.30 (16)N3i—Ni1—N5—N6−39.01 (16)
N3i—Ni1—N1—N2135.70 (16)N1—Ni1—N5—N6−133.67 (16)
N2—N1—C1—C20.1 (3)N1i—Ni1—N5—N646.33 (16)
Ni1—N1—C1—C2−177.13 (18)N3—C4—C5—C6−0.1 (3)
C1—N1—N2—C3−0.5 (3)C9—N5—N6—C70.1 (3)
Ni1—N1—N2—C3177.41 (15)Ni1—N5—N6—C7175.99 (15)
C1—N1—N2—C10−176.0 (2)C9—N5—N6—C10i178.2 (2)
Ni1—N1—N2—C101.9 (3)Ni1—N5—N6—C10i−5.9 (3)
N1—C1—C2—C30.3 (3)N3—N4—C6—C5−1.0 (3)
N5—Ni1—N3—C4−30.7 (3)C10—N4—C6—C5−173.0 (2)
N5i—Ni1—N3—C4149.3 (3)C4—C5—C6—N40.6 (3)
N1—Ni1—N3—C4−125.3 (3)N5—N6—C7—C8−0.2 (3)
N1i—Ni1—N3—C454.7 (3)C10i—N6—C7—C8−178.1 (2)
N5—Ni1—N3—N4136.29 (17)N6—C7—C8—C90.2 (3)
N5i—Ni1—N3—N4−43.71 (17)N6—N5—C9—C80.0 (3)
N1—Ni1—N3—N441.71 (16)Ni1—N5—C9—C8−174.60 (18)
N1i—Ni1—N3—N4−138.29 (16)C7—C8—C9—N5−0.1 (3)
N1—N2—C3—C20.7 (3)C3—N2—C10—N6i123.8 (2)
C10—N2—C3—C2175.7 (2)N1—N2—C10—N6i−61.6 (3)
C1—C2—C3—N2−0.6 (3)C3—N2—C10—N4−114.1 (2)
C4—N3—N4—C60.9 (3)N1—N2—C10—N460.6 (3)
Ni1—N3—N4—C6−169.89 (16)C6—N4—C10—N2107.9 (3)
C4—N3—N4—C10173.8 (2)N3—N4—C10—N2−63.7 (3)
Ni1—N3—N4—C103.0 (3)C6—N4—C10—N6i−129.4 (2)
N4—N3—C4—C5−0.5 (3)N3—N4—C10—N6i59.0 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···N80.83 (2)1.97 (2)2.798 (3)176 (3)
O1W—H2W···N7iii0.83 (2)1.99 (2)2.815 (3)174 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H1W⋯N80.83 (2)1.97 (2)2.798 (3)176 (3)
O1W—H2W⋯N7i 0.83 (2)1.99 (2)2.815 (3)174 (3)

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Allowed and forbidden d-d transitions in poly(3,5-dimethylpyrazolyl)methane complexes of nickel(II).

Authors:  Marie-Christine Nolet; Annie Michaud; Cheryl Bain; Davit Zargarian; Christian Reber
Journal:  Photochem Photobiol       Date:  2006 Jan-Feb       Impact factor: 3.421

  2 in total
  5 in total

1.  Tetra-ethyl-ammonium (2,2'-bipyridine)tetra-cyanidocobaltate(III) sesquihydrate acetonitrile solvate.

Authors:  Ganna Lyubartseva; Sean Parkin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-31

2.  Bis[tris-(1H-pyrazol-1-yl-κN)methane]-nickel(II) bis-{[tris-(1H-pyrazol-1-yl-κN)methane]-tris-(thio-cyanato-κN)nickelate(II)} methanol disolvate.

Authors:  Ganna Lyubartseva; Sean Parkin; Uma Prasad Mallik
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-05

3.  Bis[1-meth-oxy-2,2,2-tris-(pyrazol-1-yl-κN (2))ethane]-nickel(II) bis-(tri-fluoro-methane-sulfonate) dihydrate.

Authors:  Ganna Lyubartseva; Sean Parkin; Uma Prasad Mallik
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-04

4.  Bis[1-meth-oxy-2,2,2-tris-(pyrazol-1-yl-κN (2))ethane]-nickel(II) bis-(tri-fluoro-methane-sulfonate) methanol disolvate.

Authors:  Ganna Lyubartseva; Sean Parkin; Uma Prasad Mallik
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-12

5.  Crystal structure of 1-meth-oxy-2,2,2-tris-(pyrazol-1-yl)ethane.

Authors:  Ganna Lyubartseva; Sean Parkin; Morgan D Coleman; Uma Prasad Mallik
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-08-23
  5 in total

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