| Literature DB >> 24098167 |
Ganna Lyubartseva1, Sean Parkin, Uma Prasad Mallik.
Abstract
In the title salt, [Entities:
Year: 2013 PMID: 24098167 PMCID: PMC3790345 DOI: 10.1107/S1600536813024252
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C12H14N6O)2](CF3O3S)2·2H2O | |
| Triclinic, | |
| Mo | |
| Cell parameters from 25674 reflections | |
| θ = 1.0–27.5° | |
| α = 110.399 (1)° | µ = 0.76 mm−1 |
| β = 103.665 (1)° | |
| γ = 97.317 (1)° | Block, pink |
| 0.26 × 0.22 × 0.15 mm |
| Nonius KappaCCD diffractometer | 4095 independent reflections |
| Radiation source: fine-focus sealed-tube | 3708 reflections with |
| Detector resolution: 9.1 pixels mm-1 | |
| φ and ω scans at fixed χ = 55° | θmax = 27.5°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 25573 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4095 reflections | (Δ/σ)max < 0.001 |
| 266 parameters | Δρmax = 0.47 e Å−3 |
| 0 restraints | Δρmin = −0.49 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Ni1 | 0.5000 | 0.5000 | 0.5000 | 0.01222 (8) | |
| N1 | 0.44622 (15) | 0.29426 (14) | 0.35443 (11) | 0.0145 (3) | |
| N2 | 0.30215 (15) | 0.25366 (14) | 0.26196 (11) | 0.0130 (2) | |
| C1 | 0.52676 (19) | 0.18620 (17) | 0.31824 (14) | 0.0173 (3) | |
| H1 | 0.6315 | 0.1839 | 0.3649 | 0.021* | |
| C2 | 0.43694 (19) | 0.07609 (18) | 0.20223 (15) | 0.0191 (3) | |
| H2 | 0.4683 | −0.0117 | 0.1563 | 0.023* | |
| C3 | 0.29420 (19) | 0.12165 (17) | 0.16891 (14) | 0.0167 (3) | |
| H3 | 0.2062 | 0.0707 | 0.0948 | 0.020* | |
| N3 | 0.39074 (15) | 0.58147 (14) | 0.37338 (11) | 0.0149 (3) | |
| N4 | 0.24408 (15) | 0.49654 (14) | 0.28723 (11) | 0.0130 (2) | |
| C4 | 0.4154 (2) | 0.71338 (18) | 0.36109 (14) | 0.0173 (3) | |
| H4 | 0.5085 | 0.7955 | 0.4093 | 0.021* | |
| C5 | 0.2853 (2) | 0.71481 (18) | 0.26739 (15) | 0.0192 (3) | |
| H5 | 0.2738 | 0.7953 | 0.2407 | 0.023* | |
| C6 | 0.17837 (19) | 0.57573 (18) | 0.22245 (14) | 0.0169 (3) | |
| H6 | 0.0772 | 0.5411 | 0.1581 | 0.020* | |
| N5 | 0.26178 (15) | 0.43228 (14) | 0.50146 (11) | 0.0139 (2) | |
| N6 | 0.14141 (15) | 0.35547 (14) | 0.39195 (11) | 0.0125 (2) | |
| C7 | 0.19545 (19) | 0.41516 (17) | 0.58503 (14) | 0.0160 (3) | |
| H7 | 0.2508 | 0.4571 | 0.6704 | 0.019* | |
| C8 | 0.03292 (19) | 0.32692 (18) | 0.53068 (14) | 0.0170 (3) | |
| H8 | −0.0406 | 0.2992 | 0.5708 | 0.020* | |
| C9 | 0.00275 (18) | 0.28935 (17) | 0.40787 (14) | 0.0154 (3) | |
| H9 | −0.0963 | 0.2285 | 0.3453 | 0.018* | |
| C10 | 0.17782 (18) | 0.34450 (16) | 0.27853 (13) | 0.0127 (3) | |
| C11 | 0.02317 (18) | 0.26347 (17) | 0.16833 (13) | 0.0147 (3) | |
| H11A | 0.0485 | 0.2605 | 0.0928 | 0.018* | |
| H11B | −0.0137 | 0.1577 | 0.1596 | 0.018* | |
| O1 | −0.10362 (13) | 0.34191 (12) | 0.18516 (10) | 0.0167 (2) | |
| C12 | −0.25257 (19) | 0.26218 (19) | 0.08624 (15) | 0.0204 (3) | |
| H12A | −0.2344 | 0.2595 | 0.0095 | 0.031* | |
| H12B | −0.3413 | 0.3143 | 0.1009 | 0.031* | |
| H12C | −0.2839 | 0.1581 | 0.0807 | 0.031* | |
| S1A | 0.86275 (5) | 0.86391 (4) | 0.17962 (3) | 0.01557 (9) | |
| O1A | 0.76221 (16) | 0.97224 (14) | 0.17899 (12) | 0.0287 (3) | |
| O2A | 0.98159 (15) | 0.86458 (15) | 0.11398 (11) | 0.0272 (3) | |
| O3A | 0.92445 (16) | 0.85421 (15) | 0.29641 (11) | 0.0269 (3) | |
| F1A | 0.64625 (13) | 0.67273 (12) | −0.02656 (9) | 0.0292 (2) | |
| F2A | 0.79191 (16) | 0.56755 (13) | 0.07329 (13) | 0.0497 (4) | |
| F3A | 0.59605 (16) | 0.65956 (16) | 0.13326 (12) | 0.0500 (4) | |
| C1A | 0.7161 (2) | 0.68201 (19) | 0.08608 (16) | 0.0220 (3) | |
| O1W | 0.76122 (18) | 0.99331 (17) | 0.48585 (14) | 0.0368 (3) | |
| H1W | 0.848 (3) | 1.032 (3) | 0.563 (3) | 0.055* | |
| H2W | 0.812 (3) | 0.944 (3) | 0.429 (3) | 0.055* |
| Ni1 | 0.01029 (13) | 0.01323 (13) | 0.01154 (13) | 0.00243 (10) | 0.00191 (10) | 0.00400 (10) |
| N1 | 0.0101 (6) | 0.0164 (6) | 0.0136 (6) | 0.0031 (5) | 0.0010 (5) | 0.0037 (5) |
| N2 | 0.0102 (6) | 0.0146 (6) | 0.0119 (6) | 0.0027 (5) | 0.0019 (5) | 0.0037 (5) |
| C1 | 0.0134 (7) | 0.0180 (7) | 0.0198 (8) | 0.0051 (6) | 0.0045 (6) | 0.0062 (6) |
| C2 | 0.0162 (8) | 0.0165 (7) | 0.0214 (8) | 0.0050 (6) | 0.0065 (6) | 0.0029 (6) |
| C3 | 0.0150 (7) | 0.0159 (7) | 0.0152 (7) | 0.0021 (6) | 0.0040 (6) | 0.0022 (6) |
| N3 | 0.0117 (6) | 0.0157 (6) | 0.0142 (6) | 0.0005 (5) | 0.0012 (5) | 0.0050 (5) |
| N4 | 0.0105 (6) | 0.0148 (6) | 0.0117 (6) | 0.0019 (5) | 0.0011 (5) | 0.0048 (5) |
| C4 | 0.0173 (7) | 0.0164 (7) | 0.0186 (7) | 0.0025 (6) | 0.0063 (6) | 0.0070 (6) |
| C5 | 0.0202 (8) | 0.0193 (7) | 0.0218 (8) | 0.0052 (6) | 0.0068 (6) | 0.0119 (6) |
| C6 | 0.0160 (7) | 0.0210 (7) | 0.0159 (7) | 0.0065 (6) | 0.0043 (6) | 0.0095 (6) |
| N5 | 0.0119 (6) | 0.0166 (6) | 0.0105 (6) | 0.0030 (5) | 0.0014 (5) | 0.0036 (5) |
| N6 | 0.0104 (6) | 0.0146 (6) | 0.0106 (6) | 0.0017 (5) | 0.0021 (5) | 0.0038 (5) |
| C7 | 0.0177 (7) | 0.0181 (7) | 0.0132 (7) | 0.0058 (6) | 0.0054 (6) | 0.0061 (6) |
| C8 | 0.0164 (7) | 0.0191 (7) | 0.0189 (8) | 0.0047 (6) | 0.0081 (6) | 0.0093 (6) |
| C9 | 0.0120 (7) | 0.0151 (7) | 0.0189 (7) | 0.0023 (5) | 0.0049 (6) | 0.0066 (6) |
| C10 | 0.0113 (7) | 0.0141 (7) | 0.0127 (7) | 0.0036 (5) | 0.0039 (5) | 0.0047 (5) |
| C11 | 0.0113 (7) | 0.0170 (7) | 0.0124 (7) | 0.0032 (6) | 0.0013 (6) | 0.0032 (6) |
| O1 | 0.0108 (5) | 0.0193 (5) | 0.0157 (5) | 0.0048 (4) | 0.0002 (4) | 0.0039 (4) |
| C12 | 0.0122 (7) | 0.0224 (8) | 0.0213 (8) | 0.0019 (6) | −0.0030 (6) | 0.0082 (7) |
| S1A | 0.01472 (18) | 0.01723 (18) | 0.01564 (18) | 0.00405 (14) | 0.00441 (14) | 0.00749 (14) |
| O1A | 0.0262 (7) | 0.0202 (6) | 0.0351 (7) | 0.0104 (5) | 0.0029 (5) | 0.0081 (5) |
| O2A | 0.0200 (6) | 0.0363 (7) | 0.0205 (6) | −0.0021 (5) | 0.0088 (5) | 0.0067 (5) |
| O3A | 0.0297 (7) | 0.0335 (7) | 0.0178 (6) | 0.0073 (5) | 0.0035 (5) | 0.0128 (5) |
| F1A | 0.0236 (5) | 0.0295 (5) | 0.0251 (5) | −0.0015 (4) | −0.0035 (4) | 0.0091 (4) |
| F2A | 0.0461 (8) | 0.0180 (5) | 0.0645 (9) | 0.0101 (5) | −0.0122 (6) | 0.0102 (6) |
| F3A | 0.0399 (7) | 0.0563 (8) | 0.0458 (7) | −0.0180 (6) | 0.0195 (6) | 0.0166 (6) |
| C1A | 0.0208 (8) | 0.0204 (8) | 0.0266 (9) | 0.0036 (6) | 0.0052 (7) | 0.0129 (7) |
| O1W | 0.0266 (7) | 0.0383 (8) | 0.0339 (8) | 0.0027 (6) | 0.0103 (6) | 0.0014 (6) |
| Ni1—N1 | 2.0594 (12) | N5—N6 | 1.3664 (17) |
| Ni1—N1i | 2.0594 (12) | N6—C9 | 1.3625 (19) |
| Ni1—N3i | 2.0602 (13) | N6—C10 | 1.4643 (18) |
| Ni1—N3 | 2.0602 (13) | C7—C8 | 1.403 (2) |
| Ni1—N5 | 2.0664 (12) | C7—H7 | 0.9500 |
| Ni1—N5i | 2.0664 (12) | C8—C9 | 1.367 (2) |
| N1—C1 | 1.3283 (19) | C8—H8 | 0.9500 |
| N1—N2 | 1.3648 (17) | C9—H9 | 0.9500 |
| N2—C3 | 1.3617 (19) | C10—C11 | 1.529 (2) |
| N2—C10 | 1.4689 (18) | C11—O1 | 1.4140 (18) |
| C1—C2 | 1.400 (2) | C11—H11A | 0.9900 |
| C1—H1 | 0.9500 | C11—H11B | 0.9900 |
| C2—C3 | 1.370 (2) | O1—C12 | 1.4331 (18) |
| C2—H2 | 0.9500 | C12—H12A | 0.9800 |
| C3—H3 | 0.9500 | C12—H12B | 0.9800 |
| N3—C4 | 1.330 (2) | C12—H12C | 0.9800 |
| N3—N4 | 1.3671 (17) | S1A—O1A | 1.4371 (12) |
| N4—C6 | 1.3600 (19) | S1A—O2A | 1.4378 (12) |
| N4—C10 | 1.4618 (18) | S1A—O3A | 1.4418 (12) |
| C4—C5 | 1.402 (2) | S1A—C1A | 1.8237 (17) |
| C4—H4 | 0.9500 | F1A—C1A | 1.333 (2) |
| C5—C6 | 1.370 (2) | F2A—C1A | 1.332 (2) |
| C5—H5 | 0.9500 | F3A—C1A | 1.322 (2) |
| C6—H6 | 0.9500 | O1W—H1W | 0.97 (3) |
| N5—C7 | 1.3278 (19) | O1W—H2W | 0.94 (3) |
| N1—Ni1—N1i | 180.0 | C7—N5—Ni1 | 134.47 (10) |
| N1—Ni1—N3i | 93.94 (5) | N6—N5—Ni1 | 118.35 (9) |
| N1i—Ni1—N3i | 86.06 (5) | C9—N6—N5 | 110.86 (12) |
| N1—Ni1—N3 | 86.06 (5) | C9—N6—C10 | 129.46 (12) |
| N1i—Ni1—N3 | 93.94 (5) | N5—N6—C10 | 119.50 (12) |
| N3i—Ni1—N3 | 180.0 | N5—C7—C8 | 111.13 (14) |
| N1—Ni1—N5 | 84.59 (5) | N5—C7—H7 | 124.4 |
| N1i—Ni1—N5 | 95.41 (5) | C8—C7—H7 | 124.4 |
| N3i—Ni1—N5 | 95.27 (5) | C9—C8—C7 | 105.44 (13) |
| N3—Ni1—N5 | 84.73 (5) | C9—C8—H8 | 127.3 |
| N1—Ni1—N5i | 95.41 (5) | C7—C8—H8 | 127.3 |
| N1i—Ni1—N5i | 84.59 (5) | N6—C9—C8 | 107.16 (13) |
| N3i—Ni1—N5i | 84.73 (5) | N6—C9—H9 | 126.4 |
| N3—Ni1—N5i | 95.27 (5) | C8—C9—H9 | 126.4 |
| N5—Ni1—N5i | 180.00 (7) | N4—C10—N6 | 109.51 (11) |
| C1—N1—N2 | 105.55 (12) | N4—C10—N2 | 109.13 (11) |
| C1—N1—Ni1 | 135.27 (11) | N6—C10—N2 | 108.63 (11) |
| N2—N1—Ni1 | 118.89 (9) | N4—C10—C11 | 111.11 (12) |
| C3—N2—N1 | 110.80 (12) | N6—C10—C11 | 110.71 (12) |
| C3—N2—C10 | 129.99 (12) | N2—C10—C11 | 107.69 (11) |
| N1—N2—C10 | 118.99 (11) | O1—C11—C10 | 109.35 (12) |
| N1—C1—C2 | 111.08 (14) | O1—C11—H11A | 109.8 |
| N1—C1—H1 | 124.5 | C10—C11—H11A | 109.8 |
| C2—C1—H1 | 124.5 | O1—C11—H11B | 109.8 |
| C3—C2—C1 | 105.45 (14) | C10—C11—H11B | 109.8 |
| C3—C2—H2 | 127.3 | H11A—C11—H11B | 108.3 |
| C1—C2—H2 | 127.3 | C11—O1—C12 | 110.04 (11) |
| N2—C3—C2 | 107.11 (13) | O1—C12—H12A | 109.5 |
| N2—C3—H3 | 126.4 | O1—C12—H12B | 109.5 |
| C2—C3—H3 | 126.4 | H12A—C12—H12B | 109.5 |
| C4—N3—N4 | 105.69 (12) | O1—C12—H12C | 109.5 |
| C4—N3—Ni1 | 135.09 (11) | H12A—C12—H12C | 109.5 |
| N4—N3—Ni1 | 118.51 (9) | H12B—C12—H12C | 109.5 |
| C6—N4—N3 | 110.71 (12) | O1A—S1A—O2A | 114.77 (8) |
| C6—N4—C10 | 129.53 (13) | O1A—S1A—O3A | 114.93 (8) |
| N3—N4—C10 | 119.72 (12) | O2A—S1A—O3A | 114.87 (8) |
| N3—C4—C5 | 110.81 (14) | O1A—S1A—C1A | 103.12 (8) |
| N3—C4—H4 | 124.6 | O2A—S1A—C1A | 103.04 (8) |
| C5—C4—H4 | 124.6 | O3A—S1A—C1A | 103.80 (8) |
| C6—C5—C4 | 105.58 (14) | F3A—C1A—F2A | 108.54 (15) |
| C6—C5—H5 | 127.2 | F3A—C1A—F1A | 107.47 (14) |
| C4—C5—H5 | 127.2 | F2A—C1A—F1A | 106.24 (14) |
| N4—C6—C5 | 107.21 (14) | F3A—C1A—S1A | 112.04 (12) |
| N4—C6—H6 | 126.4 | F2A—C1A—S1A | 110.88 (12) |
| C5—C6—H6 | 126.4 | F1A—C1A—S1A | 111.42 (11) |
| C7—N5—N6 | 105.40 (12) | H1W—O1W—H2W | 104 (2) |
| C1—N1—N2—C3 | −0.31 (16) | N3—N4—C10—N6 | 63.30 (16) |
| Ni1—N1—N2—C3 | 174.45 (10) | C6—N4—C10—N2 | 126.87 (15) |
| C1—N1—N2—C10 | 174.92 (12) | N3—N4—C10—N2 | −55.48 (16) |
| Ni1—N1—N2—C10 | −10.32 (16) | C6—N4—C10—C11 | 8.3 (2) |
| N2—N1—C1—C2 | 0.58 (17) | N3—N4—C10—C11 | −174.09 (12) |
| Ni1—N1—C1—C2 | −172.90 (11) | C9—N6—C10—N4 | 132.03 (15) |
| N1—C1—C2—C3 | −0.63 (19) | N5—N6—C10—N4 | −53.32 (16) |
| N1—N2—C3—C2 | −0.07 (17) | C9—N6—C10—N2 | −108.88 (16) |
| C10—N2—C3—C2 | −174.63 (14) | N5—N6—C10—N2 | 65.78 (16) |
| C1—C2—C3—N2 | 0.41 (18) | C9—N6—C10—C11 | 9.2 (2) |
| C4—N3—N4—C6 | −0.20 (16) | N5—N6—C10—C11 | −176.17 (12) |
| Ni1—N3—N4—C6 | 171.53 (10) | C3—N2—C10—N4 | −120.06 (16) |
| C4—N3—N4—C10 | −178.26 (12) | N1—N2—C10—N4 | 65.75 (16) |
| Ni1—N3—N4—C10 | −6.53 (16) | C3—N2—C10—N6 | 120.60 (16) |
| N4—N3—C4—C5 | 0.07 (17) | N1—N2—C10—N6 | −53.58 (16) |
| Ni1—N3—C4—C5 | −169.62 (11) | C3—N2—C10—C11 | 0.7 (2) |
| N3—C4—C5—C6 | 0.09 (18) | N1—N2—C10—C11 | −173.53 (12) |
| N3—N4—C6—C5 | 0.26 (17) | N4—C10—C11—O1 | −64.66 (15) |
| C10—N4—C6—C5 | 178.07 (14) | N6—C10—C11—O1 | 57.25 (15) |
| C4—C5—C6—N4 | −0.20 (17) | N2—C10—C11—O1 | 175.87 (11) |
| C7—N5—N6—C9 | −1.01 (16) | C10—C11—O1—C12 | −176.45 (12) |
| Ni1—N5—N6—C9 | 166.00 (10) | O1A—S1A—C1A—F3A | −60.94 (14) |
| C7—N5—N6—C10 | −176.59 (12) | O2A—S1A—C1A—F3A | 179.35 (13) |
| Ni1—N5—N6—C10 | −9.58 (16) | O3A—S1A—C1A—F3A | 59.25 (14) |
| N6—N5—C7—C8 | 0.35 (17) | O1A—S1A—C1A—F2A | 177.62 (13) |
| Ni1—N5—C7—C8 | −163.56 (11) | O2A—S1A—C1A—F2A | 57.91 (14) |
| N5—C7—C8—C9 | 0.41 (18) | O3A—S1A—C1A—F2A | −62.19 (14) |
| N5—N6—C9—C8 | 1.28 (17) | O1A—S1A—C1A—F1A | 59.51 (14) |
| C10—N6—C9—C8 | 176.30 (14) | O2A—S1A—C1A—F1A | −60.20 (13) |
| C7—C8—C9—N6 | −1.00 (17) | O3A—S1A—C1A—F1A | 179.70 (12) |
| C6—N4—C10—N6 | −114.34 (16) |
| H··· | ||||
| O1 | 0.94 (3) | 2.06 (3) | 2.994 (2) | 174 (2) |
| O1 | 0.97 (3) | 2.12 (3) | 3.0613 (19) | 163 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1 | 0.94 (3) | 2.06 (3) | 2.994 (2) | 174 (2) |
| O1 | 0.97 (3) | 2.12 (3) | 3.0613 (19) | 163 (2) |
Symmetry code: (i) .